RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
MAP1LC3A-203ENST00000397709 PPDPFLQ8WWR9 84 aa11.52□□□□□ -0.57
MAP1LC3A-203ENST00000397709 KRTAP29-1A8MX34 341 aaPredicted RBP11.51□□□□□ -0.57
MAP1LC3A-203ENST00000397709 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
MAP1LC3A-203ENST00000397709 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
MAP1LC3A-203ENST00000397709 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
MAP1LC3A-203ENST00000397709 GHRHP01286 108 aa11.48□□□□□ -0.57
MAP1LC3A-203ENST00000397709 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
MAP1LC3A-203ENST00000397709 C3orf22Q8N5N4 141 aa11.48□□□□□ -0.57
MAP1LC3A-203ENST00000397709 LAMTOR3Q9UHA4 124 aa11.48□□□□□ -0.57
MAP1LC3A-203ENST00000397709 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
MAP1LC3A-203ENST00000397709 MT1HL1P0DM35 61 aa11.46□□□□□ -0.57
MAP1LC3A-203ENST00000397709 IGLV9-49A0A0B4J1Y8 123 aa11.45□□□□□ -0.58
MAP1LC3A-203ENST00000397709 H3BQ85 93 aa11.45□□□□□ -0.58
MAP1LC3A-203ENST00000397709 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
MAP1LC3A-203ENST00000397709 K7EP34 96 aa11.42□□□□□ -0.58
MAP1LC3A-203ENST00000397709 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
MAP1LC3A-203ENST00000397709 MOBPQ13875 183 aa11.42□□□□□ -0.58
MAP1LC3A-203ENST00000397709 H3BMG7 143 aa11.41□□□□□ -0.58
MAP1LC3A-203ENST00000397709 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
MAP1LC3A-203ENST00000397709 Q8NBF4 154 aa11.41□□□□□ -0.58
MAP1LC3A-203ENST00000397709 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
MAP1LC3A-203ENST00000397709 C9JAW5 83 aa11.39□□□□□ -0.59
MAP1LC3A-203ENST00000397709 F8WEM9 126 aa11.39□□□□□ -0.59
MAP1LC3A-203ENST00000397709 NDUFV3P56181 108 aaKnown RBP11.39□□□□□ -0.59
MAP1LC3A-203ENST00000397709 SSBP3-AS1Q7Z2R9 100 aa11.39□□□□□ -0.59
MAP1LC3A-203ENST00000397709 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
MAP1LC3A-203ENST00000397709 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
MAP1LC3A-203ENST00000397709 J3QL48 77 aa11.35□□□□□ -0.59
MAP1LC3A-203ENST00000397709 GTF2H5Q6ZYL4 71 aa11.35□□□□□ -0.59
MAP1LC3A-203ENST00000397709 H3BT86 120 aa11.33□□□□□ -0.6
MAP1LC3A-203ENST00000397709 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
MAP1LC3A-203ENST00000397709 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
MAP1LC3A-203ENST00000397709 LINC00304Q8N9R0 145 aa11.32□□□□□ -0.6
MAP1LC3A-203ENST00000397709 Q6JHZ5 121 aa11.31□□□□□ -0.6
MAP1LC3A-203ENST00000397709 PRO0461Q9UI25 63 aa11.3□□□□□ -0.6
MAP1LC3A-203ENST00000397709 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
MAP1LC3A-203ENST00000397709 A0A0G2JQZ4 141 aa11.28□□□□□ -0.6
MAP1LC3A-203ENST00000397709 A0A1B0GV90 55 aa11.27□□□□□ -0.61
MAP1LC3A-203ENST00000397709 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
MAP1LC3A-203ENST00000397709 A0A1B0GV72 72 aa11.26□□□□□ -0.61
MAP1LC3A-203ENST00000397709 SPAG11AQ6PDA7 123 aa11.26□□□□□ -0.61
MAP1LC3A-203ENST00000397709 DMBT1Q9UGM3 2413 aaPredicted RBP11.25□□□□□ -0.61
MAP1LC3A-203ENST00000397709 CD164Q04900 197 aa11.24□□□□□ -0.61
MAP1LC3A-203ENST00000397709 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
MAP1LC3A-203ENST00000397709 JMJD7-PLA2G4BH0Y9G9 81 aa11.23□□□□□ -0.61
MAP1LC3A-203ENST00000397709 RBM3P98179 157 aaKnown RBP11.23□□□□□ -0.61
MAP1LC3A-203ENST00000397709 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
MAP1LC3A-203ENST00000397709 SPINK1P00995 79 aa11.22□□□□□ -0.61
MAP1LC3A-203ENST00000397709 TRBV7-4A0A0J9YYF1 115 aa11.21□□□□□ -0.61
MAP1LC3A-203ENST00000397709 F8W1H4 67 aa11.2□□□□□ -0.62
MAP1LC3A-203ENST00000397709 HRCT1Q6UXD1 115 aa11.2□□□□□ -0.62
MAP1LC3A-203ENST00000397709 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
MAP1LC3A-203ENST00000397709 DSCR8Q96T75 97 aa11.19□□□□□ -0.62
MAP1LC3A-203ENST00000397709 Q6Q795 121 aa11.18□□□□□ -0.62
MAP1LC3A-203ENST00000397709 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
MAP1LC3A-203ENST00000397709 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
MAP1LC3A-203ENST00000397709 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.62
MAP1LC3A-203ENST00000397709 LOC110117498A0A087WWA1 95 aa11.14□□□□□ -0.63
MAP1LC3A-203ENST00000397709 C14orf132Q9NPU4 83 aa11.14□□□□□ -0.63
MAP1LC3A-203ENST00000397709 HERC1Q15751 4861 aa11.14□□□□□ -0.63
MAP1LC3A-203ENST00000397709 Q6ZQT0 140 aa11.13□□□□□ -0.63
MAP1LC3A-203ENST00000397709 CCKP06307 115 aa11.12□□□□□ -0.63
MAP1LC3A-203ENST00000397709 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
MAP1LC3A-203ENST00000397709 PDE6GP18545 87 aa11.11□□□□□ -0.63
MAP1LC3A-203ENST00000397709 Q5XG85 94 aa11.11□□□□□ -0.63
MAP1LC3A-203ENST00000397709 ETDBQ3ZM63 59 aa11.07□□□□□ -0.64
MAP1LC3A-203ENST00000397709 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
MAP1LC3A-203ENST00000397709 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
MAP1LC3A-203ENST00000397709 A0A087WSZ3 146 aa11.05□□□□□ -0.64
MAP1LC3A-203ENST00000397709 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
MAP1LC3A-203ENST00000397709 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
MAP1LC3A-203ENST00000397709 RETNLBQ9BQ08 111 aa11.02□□□□□ -0.65
MAP1LC3A-203ENST00000397709 A0A1B0GW54 56 aa11.01□□□□□ -0.65
MAP1LC3A-203ENST00000397709 C1orf195Q5TG92 126 aa10.98□□□□□ -0.65
MAP1LC3A-203ENST00000397709 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.65
MAP1LC3A-203ENST00000397709 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
MAP1LC3A-203ENST00000397709 PRR4Q16378 134 aa10.93□□□□□ -0.66
MAP1LC3A-203ENST00000397709 Q96NJ1 140 aa10.93□□□□□ -0.66
MAP1LC3A-203ENST00000397709 LINC00472Q9H8W2 130 aa10.9□□□□□ -0.66
MAP1LC3A-203ENST00000397709 IGLV7-46A0A075B6I9 117 aa10.88□□□□□ -0.67
MAP1LC3A-203ENST00000397709 NREPQ16612 68 aa10.83□□□□□ -0.68
MAP1LC3A-203ENST00000397709 LINC00846Q9NV44 126 aa10.83□□□□□ -0.68
MAP1LC3A-203ENST00000397709 IGKV4-1P06312 121 aa10.81□□□□□ -0.68
MAP1LC3A-203ENST00000397709 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
MAP1LC3A-203ENST00000397709 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
MAP1LC3A-203ENST00000397709 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
MAP1LC3A-203ENST00000397709 Q6ZVQ6 151 aa10.79□□□□□ -0.68
MAP1LC3A-203ENST00000397709 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
MAP1LC3A-203ENST00000397709 LPAP08519 4548 aa10.79□□□□□ -0.68
MAP1LC3A-203ENST00000397709 J3KT08 172 aa10.78□□□□□ -0.68
MAP1LC3A-203ENST00000397709 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
MAP1LC3A-203ENST00000397709 ACYP1P07311 99 aa10.77□□□□□ -0.69
MAP1LC3A-203ENST00000397709 UBL5Q9BZL1 73 aa10.76□□□□□ -0.69
MAP1LC3A-203ENST00000397709 LRP2P98164 4655 aa10.71□□□□□ -0.69
MAP1LC3A-203ENST00000397709 J3QR89 54 aa10.71□□□□□ -0.69
MAP1LC3A-203ENST00000397709 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
MAP1LC3A-203ENST00000397709 A8MWP4 228 aa10.69□□□□□ -0.7
MAP1LC3A-203ENST00000397709 BPY2O14599 106 aa10.69□□□□□ -0.7
MAP1LC3A-203ENST00000397709 DSCR10P59022 87 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 279.6 ms