RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 F8WEM9 126 aa14.13□□□□□ -0.15
TSPAN4-202ENST00000397396 LINC01600Q96MT4 127 aa14.13□□□□□ -0.15
TSPAN4-202ENST00000397396 PRO0461Q9UI25 63 aa14.13□□□□□ -0.15
TSPAN4-202ENST00000397396 MTURNQ8N3F0 131 aa14.12□□□□□ -0.15
TSPAN4-202ENST00000397396 NDUFV3P56181 108 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-202ENST00000397396 KRTAP1-4P0C5Y4 121 aa14.08□□□□□ -0.16
TSPAN4-202ENST00000397396 SMIM29Q86T20 159 aa14.08□□□□□ -0.16
TSPAN4-202ENST00000397396 JMJD7-PLA2G4BH0Y9G9 81 aa14.06□□□□□ -0.16
TSPAN4-202ENST00000397396 CRYGAP11844 174 aa14.06□□□□□ -0.16
TSPAN4-202ENST00000397396 KRTAP17-1Q9BYP8 105 aa14.06□□□□□ -0.16
TSPAN4-202ENST00000397396 SMCPP49901 116 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-202ENST00000397396 C3orf22Q8N5N4 141 aa14.04□□□□□ -0.16
TSPAN4-202ENST00000397396 ANAPC11Q9NYG5 84 aa14.03□□□□□ -0.16
TSPAN4-202ENST00000397396 C9orf153Q5TBE3 101 aa14.01□□□□□ -0.17
TSPAN4-202ENST00000397396 Q8NBF4 154 aa14.01□□□□□ -0.17
TSPAN4-202ENST00000397396 IGLV9-49A0A0B4J1Y8 123 aa14□□□□□ -0.17
TSPAN4-202ENST00000397396 IGLV8-61A0A075B6I0 122 aa13.99□□□□□ -0.17
TSPAN4-202ENST00000397396 RBM3P98179 157 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-202ENST00000397396 Q6JHZ5 121 aa13.99□□□□□ -0.17
TSPAN4-202ENST00000397396 TEN1Q86WV5 123 aa13.98□□□□□ -0.17
TSPAN4-202ENST00000397396 A0A087X002 238 aa13.96□□□□□ -0.17
TSPAN4-202ENST00000397396 MOBPQ13875 183 aa13.96□□□□□ -0.17
TSPAN4-202ENST00000397396 C21orf62-AS1Q17RA5 79 aa13.96□□□□□ -0.17
TSPAN4-202ENST00000397396 DSCR8Q96T75 97 aa13.96□□□□□ -0.17
TSPAN4-202ENST00000397396 SRRM2Q9UQ35 2752 aaKnown RBP13.96□□□□□ -0.18
TSPAN4-202ENST00000397396 SSBP3-AS1Q7Z2R9 100 aa13.95□□□□□ -0.18
TSPAN4-202ENST00000397396 OBSCN-AS1Q96MR7 158 aa13.95□□□□□ -0.18
TSPAN4-202ENST00000397396 PKHD1L1Q86WI1 4243 aa13.94□□□□□ -0.18
TSPAN4-202ENST00000397396 PDE6GP18545 87 aa13.93□□□□□ -0.18
TSPAN4-202ENST00000397396 A0A1B0GV72 72 aa13.92□□□□□ -0.18
TSPAN4-202ENST00000397396 ETDBQ3ZM63 59 aa13.92□□□□□ -0.18
TSPAN4-202ENST00000397396 KRTAP13-2Q52LG2 175 aa13.91□□□□□ -0.18
TSPAN4-202ENST00000397396 TYMSOSQ8TAI1 123 aa13.91□□□□□ -0.18
TSPAN4-202ENST00000397396 PRR26Q8N8Z3 221 aa13.9□□□□□ -0.18
TSPAN4-202ENST00000397396 TRBV7-4A0A0J9YYF1 115 aa13.9□□□□□ -0.19
TSPAN4-202ENST00000397396 LOC110117498A0A087WWA1 95 aa13.89□□□□□ -0.19
TSPAN4-202ENST00000397396 KRTAP4-5Q9BYR2 181 aa13.88□□□□□ -0.19
TSPAN4-202ENST00000397396 C14orf132Q9NPU4 83 aa13.88□□□□□ -0.19
TSPAN4-202ENST00000397396 ABCA13Q86UQ4 5058 aa13.87□□□□□ -0.19
TSPAN4-202ENST00000397396 IGFL1Q6UW32 110 aa13.87□□□□□ -0.19
TSPAN4-202ENST00000397396 OXTP01178 125 aa13.86□□□□□ -0.19
TSPAN4-202ENST00000397396 PCLOQ9Y6V0 5065 aa13.81□□□□□ -0.2
TSPAN4-202ENST00000397396 Q6ZQT0 140 aa13.81□□□□□ -0.2
TSPAN4-202ENST00000397396 CD164Q04900 197 aa13.8□□□□□ -0.2
TSPAN4-202ENST00000397396 Q6Q795 121 aa13.8□□□□□ -0.2
TSPAN4-202ENST00000397396 CCKP06307 115 aa13.79□□□□□ -0.2
TSPAN4-202ENST00000397396 C4orf48Q5BLP8 95 aa13.79□□□□□ -0.2
TSPAN4-202ENST00000397396 SPAG11AQ6PDA7 123 aa13.78□□□□□ -0.2
TSPAN4-202ENST00000397396 A0A1B0GW54 56 aa13.77□□□□□ -0.21
TSPAN4-202ENST00000397396 KRTAP10-8P60410 259 aa13.76□□□□□ -0.21
TSPAN4-202ENST00000397396 LINC00304Q8N9R0 145 aa13.76□□□□□ -0.21
TSPAN4-202ENST00000397396 VPS25Q9BRG1 176 aa13.76□□□□□ -0.21
TSPAN4-202ENST00000397396 KRTAP29-1A8MX34 341 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-202ENST00000397396 FLG2Q5D862 2391 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-202ENST00000397396 A0A1W2PNM2 257 aa13.73□□□□□ -0.21
TSPAN4-202ENST00000397396 A0A0G2JQZ4 141 aa13.71□□□□□ -0.21
TSPAN4-202ENST00000397396 SPINK1P00995 79 aa13.71□□□□□ -0.21
TSPAN4-202ENST00000397396 J3QR89 54 aa13.7□□□□□ -0.22
TSPAN4-202ENST00000397396 TRBV7-7A0A0K0K1E9 115 aa13.69□□□□□ -0.22
TSPAN4-202ENST00000397396 RPS29P62273 56 aaKnown RBP13.69□□□□□ -0.22
TSPAN4-202ENST00000397396 HRCT1Q6UXD1 115 aa13.68□□□□□ -0.22
TSPAN4-202ENST00000397396 LIMD2Q9BT23 127 aa13.67□□□□□ -0.22
TSPAN4-202ENST00000397396 SS18L2Q9UHA2 77 aa13.67□□□□□ -0.22
TSPAN4-202ENST00000397396 FAT3Q8TDW7 4589 aa13.66□□□□□ -0.22
TSPAN4-202ENST00000397396 MT1HL1P0DM35 61 aa13.65□□□□□ -0.22
TSPAN4-202ENST00000397396 A0A087WSZ3 146 aa13.64□□□□□ -0.23
TSPAN4-202ENST00000397396 ACYP1P07311 99 aa13.64□□□□□ -0.23
TSPAN4-202ENST00000397396 LRP1Q07954 4544 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-202ENST00000397396 FAM240AA0A1B0GVK7 77 aa13.63□□□□□ -0.23
TSPAN4-202ENST00000397396 Q5XG85 94 aa13.63□□□□□ -0.23
TSPAN4-202ENST00000397396 J3QL48 77 aa13.6□□□□□ -0.23
TSPAN4-202ENST00000397396 MYCBP2O75592 4640 aa13.58□□□□□ -0.23
TSPAN4-202ENST00000397396 K7ERU9 68 aa13.58□□□□□ -0.24
TSPAN4-202ENST00000397396 TNXBP22105 4242 aa13.55□□□□□ -0.24
TSPAN4-202ENST00000397396 ASB16-AS1Q495Z4 193 aa13.55□□□□□ -0.24
TSPAN4-202ENST00000397396 UBL5Q9BZL1 73 aa13.54□□□□□ -0.24
TSPAN4-202ENST00000397396 NREPQ16612 68 aa13.51□□□□□ -0.25
TSPAN4-202ENST00000397396 LINC00846Q9NV44 126 aa13.5□□□□□ -0.25
TSPAN4-202ENST00000397396 Q6ZVQ6 151 aa13.44□□□□□ -0.26
TSPAN4-202ENST00000397396 J3KT08 172 aa13.41□□□□□ -0.26
TSPAN4-202ENST00000397396 LINC00472Q9H8W2 130 aa13.4□□□□□ -0.26
TSPAN4-202ENST00000397396 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-202ENST00000397396 C1orf195Q5TG92 126 aa13.39□□□□□ -0.27
TSPAN4-202ENST00000397396 Q96NJ1 140 aa13.37□□□□□ -0.27
TSPAN4-202ENST00000397396 SIGMAR1Q99720 223 aa13.37□□□□□ -0.27
TSPAN4-202ENST00000397396 BPY2O14599 106 aa13.35□□□□□ -0.27
TSPAN4-202ENST00000397396 ATP5EP2Q5VTU8 51 aa13.34□□□□□ -0.27
TSPAN4-202ENST00000397396 IGKV4-1P06312 121 aa13.33□□□□□ -0.28
TSPAN4-202ENST00000397396 FP248Q71RG6 208 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-202ENST00000397396 LINC00643Q86TS7 51 aa13.33□□□□□ -0.28
TSPAN4-202ENST00000397396 CXCL6P80162 114 aa13.29□□□□□ -0.28
TSPAN4-202ENST00000397396 DEFB116Q30KQ4 102 aa13.28□□□□□ -0.28
TSPAN4-202ENST00000397396 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
TSPAN4-202ENST00000397396 HERC1Q15751 4861 aa13.27□□□□□ -0.28
TSPAN4-202ENST00000397396 NDUFB1O75438 58 aa13.27□□□□□ -0.29
TSPAN4-202ENST00000397396 CDIP1Q9H305 208 aa13.27□□□□□ -0.29
TSPAN4-202ENST00000397396 A8MWP4 228 aa13.24□□□□□ -0.29
TSPAN4-202ENST00000397396 DSCR10P59022 87 aa13.2□□□□□ -0.3
TSPAN4-202ENST00000397396 PRR4Q16378 134 aa13.18□□□□□ -0.3
TSPAN4-202ENST00000397396 IGLV7-46A0A075B6I9 117 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms