RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 C21orf62-AS1Q17RA5 79 aa8.22□□□□□ -1.09
MCF2L-209ENST00000397036 GAGE2AQ6NT46 116 aa8.21□□□□□ -1.1
MCF2L-209ENST00000397036 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
MCF2L-209ENST00000397036 IGLV8-61A0A075B6I0 122 aa8.2□□□□□ -1.1
MCF2L-209ENST00000397036 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
MCF2L-209ENST00000397036 J3QR89 54 aa8.19□□□□□ -1.1
MCF2L-209ENST00000397036 SMR3BP02814 79 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-209ENST00000397036 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-209ENST00000397036 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
MCF2L-209ENST00000397036 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
MCF2L-209ENST00000397036 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
MCF2L-209ENST00000397036 K7ERU9 68 aa8.17□□□□□ -1.1
MCF2L-209ENST00000397036 FAT1Q14517 4588 aa8.17□□□□□ -1.1
MCF2L-209ENST00000397036 F8WEM9 126 aa8.16□□□□□ -1.1
MCF2L-209ENST00000397036 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
MCF2L-209ENST00000397036 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
MCF2L-209ENST00000397036 C14orf132Q9NPU4 83 aa8.16□□□□□ -1.1
MCF2L-209ENST00000397036 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
MCF2L-209ENST00000397036 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.1
MCF2L-209ENST00000397036 CCKP06307 115 aa8.14□□□□□ -1.11
MCF2L-209ENST00000397036 Q6JHZ5 121 aa8.14□□□□□ -1.11
MCF2L-209ENST00000397036 Q6ZQT0 140 aa8.14□□□□□ -1.11
MCF2L-209ENST00000397036 HSPG2P98160 4391 aa8.14□□□□□ -1.11
MCF2L-209ENST00000397036 FAM240AA0A1B0GVK7 77 aa8.13□□□□□ -1.11
MCF2L-209ENST00000397036 A0A1B0GW54 56 aa8.12□□□□□ -1.11
MCF2L-209ENST00000397036 ACYP1P07311 99 aa8.12□□□□□ -1.11
MCF2L-209ENST00000397036 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
MCF2L-209ENST00000397036 RYR1P21817 5038 aa8.1□□□□□ -1.11
MCF2L-209ENST00000397036 A0A1B0GV72 72 aa8.09□□□□□ -1.11
MCF2L-209ENST00000397036 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
MCF2L-209ENST00000397036 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-209ENST00000397036 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
MCF2L-209ENST00000397036 Q6Q795 121 aa8.08□□□□□ -1.12
MCF2L-209ENST00000397036 IGFL1Q6UW32 110 aa8.08□□□□□ -1.12
MCF2L-209ENST00000397036 Q8NBF4 154 aa8.08□□□□□ -1.12
MCF2L-209ENST00000397036 ANAPC11Q9NYG5 84 aa8.08□□□□□ -1.12
MCF2L-209ENST00000397036 CRYGAP11844 174 aa8.07□□□□□ -1.12
MCF2L-209ENST00000397036 Q8N1X5 172 aa8.07□□□□□ -1.12
MCF2L-209ENST00000397036 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
MCF2L-209ENST00000397036 Q5VSD8 79 aa8.06□□□□□ -1.12
MCF2L-209ENST00000397036 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
MCF2L-209ENST00000397036 A0A087X002 238 aa8.03□□□□□ -1.12
MCF2L-209ENST00000397036 MOBPQ13875 183 aa8.03□□□□□ -1.12
MCF2L-209ENST00000397036 C9orf153Q5TBE3 101 aa8.03□□□□□ -1.12
MCF2L-209ENST00000397036 KIAA1109Q2LD37 5005 aa8.03□□□□□ -1.12
MCF2L-209ENST00000397036 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
MCF2L-209ENST00000397036 CD164Q04900 197 aa8.01□□□□□ -1.13
MCF2L-209ENST00000397036 VPS25Q9BRG1 176 aa8.01□□□□□ -1.13
MCF2L-209ENST00000397036 PKHD1L1Q86WI1 4243 aa8.01□□□□□ -1.13
MCF2L-209ENST00000397036 LINC00846Q9NV44 126 aa8□□□□□ -1.13
MCF2L-209ENST00000397036 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
MCF2L-209ENST00000397036 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
MCF2L-209ENST00000397036 TRBV7-7A0A0K0K1E9 115 aa7.98□□□□□ -1.13
MCF2L-209ENST00000397036 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
MCF2L-209ENST00000397036 UBL5Q9BZL1 73 aa7.98□□□□□ -1.13
MCF2L-209ENST00000397036 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
MCF2L-209ENST00000397036 LINC00643Q86TS7 51 aa7.95□□□□□ -1.14
MCF2L-209ENST00000397036 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
MCF2L-209ENST00000397036 Q6ZVQ6 151 aa7.93□□□□□ -1.14
MCF2L-209ENST00000397036 A0A087WSZ3 146 aa7.93□□□□□ -1.14
MCF2L-209ENST00000397036 NREPQ16612 68 aa7.93□□□□□ -1.14
MCF2L-209ENST00000397036 Q5XG85 94 aa7.93□□□□□ -1.14
MCF2L-209ENST00000397036 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
MCF2L-209ENST00000397036 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
MCF2L-209ENST00000397036 BIRC6Q9NR09 4857 aa7.91□□□□□ -1.14
MCF2L-209ENST00000397036 SPINK1P00995 79 aa7.9□□□□□ -1.14
MCF2L-209ENST00000397036 KRTAP10-8P60410 259 aa7.9□□□□□ -1.14
MCF2L-209ENST00000397036 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.14
MCF2L-209ENST00000397036 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
MCF2L-209ENST00000397036 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
MCF2L-209ENST00000397036 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
MCF2L-209ENST00000397036 FLG2Q5D862 2391 aaPredicted RBP7.88□□□□□ -1.15
MCF2L-209ENST00000397036 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
MCF2L-209ENST00000397036 CXCL6P80162 114 aa7.87□□□□□ -1.15
MCF2L-209ENST00000397036 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
MCF2L-209ENST00000397036 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
MCF2L-209ENST00000397036 SIGMAR1Q99720 223 aa7.85□□□□□ -1.15
MCF2L-209ENST00000397036 LIMD2Q9BT23 127 aa7.85□□□□□ -1.15
MCF2L-209ENST00000397036 OXTP01178 125 aa7.84□□□□□ -1.15
MCF2L-209ENST00000397036 J3KT08 172 aa7.83□□□□□ -1.16
MCF2L-209ENST00000397036 BPY2O14599 106 aa7.83□□□□□ -1.16
MCF2L-209ENST00000397036 IMUPQ9GZP8 106 aa7.83□□□□□ -1.16
MCF2L-209ENST00000397036 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
MCF2L-209ENST00000397036 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
MCF2L-209ENST00000397036 MT-ATP8P03928 68 aa7.82□□□□□ -1.16
MCF2L-209ENST00000397036 Q96NJ1 140 aa7.82□□□□□ -1.16
MCF2L-209ENST00000397036 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
MCF2L-209ENST00000397036 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
MCF2L-209ENST00000397036 TNXBP22105 4242 aa7.81□□□□□ -1.16
MCF2L-209ENST00000397036 LRP1Q07954 4544 aaKnown RBP7.8□□□□□ -1.16
MCF2L-209ENST00000397036 HERC2O95714 4834 aa7.8□□□□□ -1.16
MCF2L-209ENST00000397036 IGKV3D-7A0A0C4DH55 119 aa7.79□□□□□ -1.16
MCF2L-209ENST00000397036 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
MCF2L-209ENST00000397036 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
MCF2L-209ENST00000397036 DSCR10P59022 87 aa7.78□□□□□ -1.16
MCF2L-209ENST00000397036 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
MCF2L-209ENST00000397036 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
MCF2L-209ENST00000397036 A8MWP4 228 aa7.75□□□□□ -1.17
MCF2L-209ENST00000397036 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
MCF2L-209ENST00000397036 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms