RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
VAMP1-202ENST00000396308 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
VAMP1-202ENST00000396308 A0A1B0GV72 72 aa9.31□□□□□ -0.92
VAMP1-202ENST00000396308 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
VAMP1-202ENST00000396308 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
VAMP1-202ENST00000396308 Q5VSD8 79 aa9.31□□□□□ -0.92
VAMP1-202ENST00000396308 DSCR8Q96T75 97 aa9.31□□□□□ -0.92
VAMP1-202ENST00000396308 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
VAMP1-202ENST00000396308 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
VAMP1-202ENST00000396308 PDE6GP18545 87 aa9.28□□□□□ -0.92
VAMP1-202ENST00000396308 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
VAMP1-202ENST00000396308 J3QR89 54 aa9.27□□□□□ -0.93
VAMP1-202ENST00000396308 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
VAMP1-202ENST00000396308 OBSCN-AS1Q96MR7 158 aa9.27□□□□□ -0.93
VAMP1-202ENST00000396308 C14orf132Q9NPU4 83 aa9.27□□□□□ -0.93
VAMP1-202ENST00000396308 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
VAMP1-202ENST00000396308 IGLV9-49A0A0B4J1Y8 123 aa9.26□□□□□ -0.93
VAMP1-202ENST00000396308 Q6JHZ5 121 aa9.25□□□□□ -0.93
VAMP1-202ENST00000396308 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
VAMP1-202ENST00000396308 Q8N1X5 172 aa9.25□□□□□ -0.93
VAMP1-202ENST00000396308 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
VAMP1-202ENST00000396308 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
VAMP1-202ENST00000396308 Q8NBF4 154 aa9.24□□□□□ -0.93
VAMP1-202ENST00000396308 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
VAMP1-202ENST00000396308 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
VAMP1-202ENST00000396308 CRYGAP11844 174 aa9.22□□□□□ -0.93
VAMP1-202ENST00000396308 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.94
VAMP1-202ENST00000396308 MOBPQ13875 183 aa9.21□□□□□ -0.94
VAMP1-202ENST00000396308 ANAPC11Q9NYG5 84 aa9.21□□□□□ -0.94
VAMP1-202ENST00000396308 K7ERU9 68 aa9.2□□□□□ -0.94
VAMP1-202ENST00000396308 VPS25Q9BRG1 176 aa9.2□□□□□ -0.94
VAMP1-202ENST00000396308 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
VAMP1-202ENST00000396308 CCKP06307 115 aa9.18□□□□□ -0.94
VAMP1-202ENST00000396308 Q6ZQT0 140 aa9.18□□□□□ -0.94
VAMP1-202ENST00000396308 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
VAMP1-202ENST00000396308 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
VAMP1-202ENST00000396308 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
VAMP1-202ENST00000396308 SSBP3-AS1Q7Z2R9 100 aa9.16□□□□□ -0.94
VAMP1-202ENST00000396308 ACYP1P07311 99 aa9.15□□□□□ -0.94
VAMP1-202ENST00000396308 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
VAMP1-202ENST00000396308 A0A087X002 238 aa9.13□□□□□ -0.95
VAMP1-202ENST00000396308 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
VAMP1-202ENST00000396308 A0A1B0GW54 56 aa9.13□□□□□ -0.95
VAMP1-202ENST00000396308 SRRM2Q9UQ35 2752 aaKnown RBP9.12□□□□□ -0.95
VAMP1-202ENST00000396308 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
VAMP1-202ENST00000396308 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
VAMP1-202ENST00000396308 Q6Q795 121 aa9.09□□□□□ -0.95
VAMP1-202ENST00000396308 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
VAMP1-202ENST00000396308 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
VAMP1-202ENST00000396308 CD164Q04900 197 aa9.08□□□□□ -0.96
VAMP1-202ENST00000396308 HSPG2P98160 4391 aa9.06□□□□□ -0.96
VAMP1-202ENST00000396308 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
VAMP1-202ENST00000396308 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
VAMP1-202ENST00000396308 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
VAMP1-202ENST00000396308 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
VAMP1-202ENST00000396308 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
VAMP1-202ENST00000396308 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
VAMP1-202ENST00000396308 A0A087WSZ3 146 aa9.03□□□□□ -0.96
VAMP1-202ENST00000396308 SPAG11AQ6PDA7 123 aa9.03□□□□□ -0.96
VAMP1-202ENST00000396308 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
VAMP1-202ENST00000396308 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
VAMP1-202ENST00000396308 NREPQ16612 68 aa9.01□□□□□ -0.97
VAMP1-202ENST00000396308 LINC00846Q9NV44 126 aa9□□□□□ -0.97
VAMP1-202ENST00000396308 SPINK1P00995 79 aa8.99□□□□□ -0.97
VAMP1-202ENST00000396308 OXTP01178 125 aa8.98□□□□□ -0.97
VAMP1-202ENST00000396308 Q6ZVQ6 151 aa8.97□□□□□ -0.97
VAMP1-202ENST00000396308 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
VAMP1-202ENST00000396308 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
VAMP1-202ENST00000396308 FAT1Q14517 4588 aa8.95□□□□□ -0.98
VAMP1-202ENST00000396308 LINC00643Q86TS7 51 aa8.94□□□□□ -0.98
VAMP1-202ENST00000396308 HERC1Q15751 4861 aa8.92□□□□□ -0.98
VAMP1-202ENST00000396308 Q5XG85 94 aa8.92□□□□□ -0.98
VAMP1-202ENST00000396308 BPY2O14599 106 aa8.91□□□□□ -0.98
VAMP1-202ENST00000396308 KRTAP10-8P60410 259 aa8.91□□□□□ -0.98
VAMP1-202ENST00000396308 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
VAMP1-202ENST00000396308 J3KT08 172 aa8.9□□□□□ -0.98
VAMP1-202ENST00000396308 ASB16-AS1Q495Z4 193 aa8.9□□□□□ -0.98
VAMP1-202ENST00000396308 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.98
VAMP1-202ENST00000396308 SIGMAR1Q99720 223 aa8.89□□□□□ -0.99
VAMP1-202ENST00000396308 CXCL6P80162 114 aa8.88□□□□□ -0.99
VAMP1-202ENST00000396308 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
VAMP1-202ENST00000396308 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
VAMP1-202ENST00000396308 IGKV4-1P06312 121 aa8.85□□□□□ -0.99
VAMP1-202ENST00000396308 IGKV3D-7A0A0C4DH55 119 aa8.84□□□□□ -0.99
VAMP1-202ENST00000396308 J3QL48 77 aa8.84□□□□□ -0.99
VAMP1-202ENST00000396308 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
VAMP1-202ENST00000396308 NDUFB1O75438 58 aa8.83□□□□□ -1
VAMP1-202ENST00000396308 MT1HL1P0DM35 61 aa8.82□□□□□ -1
VAMP1-202ENST00000396308 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
VAMP1-202ENST00000396308 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
VAMP1-202ENST00000396308 Q96NJ1 140 aa8.8□□□□□ -1
VAMP1-202ENST00000396308 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
VAMP1-202ENST00000396308 C1orf195Q5TG92 126 aa8.79□□□□□ -1
VAMP1-202ENST00000396308 A8MWP4 228 aa8.78□□□□□ -1
VAMP1-202ENST00000396308 MT-ATP8P03928 68 aa8.78□□□□□ -1
VAMP1-202ENST00000396308 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
VAMP1-202ENST00000396308 DSCR10P59022 87 aa8.75□□□□□ -1.01
VAMP1-202ENST00000396308 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
VAMP1-202ENST00000396308 K7EQZ3 153 aa8.73□□□□□ -1.01
VAMP1-202ENST00000396308 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms