RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
MSH5-205ENST00000395853 C1orf134Q5TEV5 83 aa5.8□□□□□ -1.48
MSH5-205ENST00000395853 GIG44P09565 113 aaPredicted RBP5.79□□□□□ -1.48
MSH5-205ENST00000395853 TNP2Q05952 138 aa5.79□□□□□ -1.48
MSH5-205ENST00000395853 C19orf73Q9NVV2 129 aa5.79□□□□□ -1.48
MSH5-205ENST00000395853 DNAH9Q9NYC9 4486 aa5.78□□□□□ -1.48
MSH5-205ENST00000395853 COX17Q14061 63 aa5.78□□□□□ -1.48
MSH5-205ENST00000395853 CSAG1Q6PB30 78 aa5.78□□□□□ -1.48
MSH5-205ENST00000395853 TRGV4A0A0C4DH28 118 aa5.78□□□□□ -1.48
MSH5-205ENST00000395853 TENM3Q9P273 2699 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 TRGV1A0A0A0MS02 117 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 H3BPC8 53 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 KRTAP10-11P60412 298 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 REG3AQ06141 175 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 Q8IZM0 81 aa5.77□□□□□ -1.49
MSH5-205ENST00000395853 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
MSH5-205ENST00000395853 A0A1B0GW54 56 aa5.76□□□□□ -1.49
MSH5-205ENST00000395853 Q8NDZ9 215 aa5.76□□□□□ -1.49
MSH5-205ENST00000395853 NOP10Q9NPE3 64 aaKnown RBP5.76□□□□□ -1.49
MSH5-205ENST00000395853 K7EQZ3 153 aa5.75□□□□□ -1.49
MSH5-205ENST00000395853 CMC4P56277 68 aaPredicted RBP5.75□□□□□ -1.49
MSH5-205ENST00000395853 IGHV4-28A0A0C4DH34 117 aa5.75□□□□□ -1.49
MSH5-205ENST00000395853 Q6ZR54 194 aa5.75□□□□□ -1.49
MSH5-205ENST00000395853 CSNK1G2-AS1Q8NCQ2 148 aa5.75□□□□□ -1.49
MSH5-205ENST00000395853 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
MSH5-205ENST00000395853 LINC00959A0A1B0GUT2 108 aa5.74□□□□□ -1.49
MSH5-205ENST00000395853 DSCR10P59022 87 aa5.74□□□□□ -1.49
MSH5-205ENST00000395853 ROMO1P60602 79 aa5.74□□□□□ -1.49
MSH5-205ENST00000395853 C9orf163Q8N9P6 203 aa5.74□□□□□ -1.49
MSH5-205ENST00000395853 H0Y9P7 68 aa5.74□□□□□ -1.49
MSH5-205ENST00000395853 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
MSH5-205ENST00000395853 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
MSH5-205ENST00000395853 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
MSH5-205ENST00000395853 CASC10Q5T4H9 136 aa5.73□□□□□ -1.49
MSH5-205ENST00000395853 C16orf74Q96GX8 76 aa5.71□□□□□ -1.49
MSH5-205ENST00000395853 X6R8D5 127 aa5.7□□□□□ -1.5
MSH5-205ENST00000395853 IGKV2D-24A0A075B6R9 120 aa5.69□□□□□ -1.5
MSH5-205ENST00000395853 DEFB116Q30KQ4 102 aa5.69□□□□□ -1.5
MSH5-205ENST00000395853 RYR2Q92736 4967 aa5.69□□□□□ -1.5
MSH5-205ENST00000395853 DNAH1Q9P2D7 4330 aa5.68□□□□□ -1.5
MSH5-205ENST00000395853 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
MSH5-205ENST00000395853 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
MSH5-205ENST00000395853 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
MSH5-205ENST00000395853 DEFB130BP0DP73 79 aa5.67□□□□□ -1.5
MSH5-205ENST00000395853 DEFB130AP0DP74 79 aa5.67□□□□□ -1.5
MSH5-205ENST00000395853 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
MSH5-205ENST00000395853 CHCHD10Q8WYQ3 142 aaPredicted RBP5.66□□□□□ -1.5
MSH5-205ENST00000395853 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
MSH5-205ENST00000395853 EPPK1P58107 5090 aaKnown RBP5.64□□□□□ -1.51
MSH5-205ENST00000395853 DEFB4AO15263 64 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 TENM2Q9NT68 2774 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 DEFB135Q30KP9 77 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 REG3GQ6UW15 175 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
MSH5-205ENST00000395853 Q8NBF4 154 aa5.63□□□□□ -1.51
MSH5-205ENST00000395853 DNAH7Q8WXX0 4024 aa5.63□□□□□ -1.51
MSH5-205ENST00000395853 STAB2Q8WWQ8 2551 aa5.63□□□□□ -1.51
MSH5-205ENST00000395853 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
MSH5-205ENST00000395853 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
MSH5-205ENST00000395853 SPRR4Q96PI1 79 aa5.62□□□□□ -1.51
MSH5-205ENST00000395853 HUWE1Q7Z6Z7 4374 aaKnown RBP5.62□□□□□ -1.51
MSH5-205ENST00000395853 GYPEP15421 78 aa5.61□□□□□ -1.51
MSH5-205ENST00000395853 A0A096LPF7 62 aa5.61□□□□□ -1.51
MSH5-205ENST00000395853 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
MSH5-205ENST00000395853 KRTAP29-1A8MX34 341 aaPredicted RBP5.6□□□□□ -1.51
MSH5-205ENST00000395853 HRES1P13985 223 aa5.6□□□□□ -1.51
MSH5-205ENST00000395853 DEFB105AQ8NG35 78 aa5.6□□□□□ -1.51
MSH5-205ENST00000395853 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
MSH5-205ENST00000395853 Q8N377 158 aa5.59□□□□□ -1.51
MSH5-205ENST00000395853 LYSTQ99698 3801 aa5.59□□□□□ -1.52
MSH5-205ENST00000395853 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
MSH5-205ENST00000395853 PRO0255Q9UI72 69 aa5.58□□□□□ -1.52
MSH5-205ENST00000395853 C7orf33Q8WU49 177 aa5.58□□□□□ -1.52
MSH5-205ENST00000395853 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
MSH5-205ENST00000395853 A0A0J9YWU9 116 aa5.57□□□□□ -1.52
MSH5-205ENST00000395853 P0C880 135 aa5.56□□□□□ -1.52
MSH5-205ENST00000395853 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
MSH5-205ENST00000395853 XAGE1AQ9HD64 81 aa5.55□□□□□ -1.52
MSH5-205ENST00000395853 A0A1B0GUV1 79 aa5.54□□□□□ -1.52
MSH5-205ENST00000395853 HTN3P15516 51 aa5.54□□□□□ -1.52
MSH5-205ENST00000395853 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
MSH5-205ENST00000395853 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
MSH5-205ENST00000395853 ZNF861PO60384 105 aa5.53□□□□□ -1.52
MSH5-205ENST00000395853 SPART-AS1P0CW21 52 aa5.53□□□□□ -1.52
MSH5-205ENST00000395853 STARD9Q9P2P6 4700 aa5.53□□□□□ -1.52
MSH5-205ENST00000395853 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
MSH5-205ENST00000395853 UQCR11O14957 56 aa5.52□□□□□ -1.53
MSH5-205ENST00000395853 DEFB131BA0A096LNP1 70 aa5.51□□□□□ -1.53
MSH5-205ENST00000395853 A0A1B0GU69 56 aa5.51□□□□□ -1.53
MSH5-205ENST00000395853 IGLV10-54A0A075B6I4 117 aa5.5□□□□□ -1.53
MSH5-205ENST00000395853 CSMD3Q7Z407 3707 aa5.5□□□□□ -1.53
MSH5-205ENST00000395853 ANGP03950 147 aaKnown RBP5.5□□□□□ -1.53
MSH5-205ENST00000395853 GVQW2A0A096LPI5 108 aaPredicted RBP5.49□□□□□ -1.53
MSH5-205ENST00000395853 A8MWP4 228 aa5.49□□□□□ -1.53
MSH5-205ENST00000395853 PLECQ15149 4684 aaKnown RBP5.49□□□□□ -1.53
MSH5-205ENST00000395853 HYDINQ4G0P3 5121 aa5.48□□□□□ -1.53
MSH5-205ENST00000395853 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
MSH5-205ENST00000395853 PRR34Q9NV39 138 aa5.48□□□□□ -1.53
MSH5-205ENST00000395853 LINC00483Q53H64 154 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 307.7 ms