RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
RAPGEF3-203ENST00000395360 LCE6AA0A183 80 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 BCE1O60756 84 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 BPY2O14599 106 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 Q8NBF4 154 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 PKIGQ9Y2B9 76 aa9.73□□□□□ -0.85
RAPGEF3-203ENST00000395360 C9orf163Q8N9P6 203 aa9.72□□□□□ -0.85
RAPGEF3-203ENST00000395360 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
RAPGEF3-203ENST00000395360 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
RAPGEF3-203ENST00000395360 A0A1B0GW54 56 aa9.71□□□□□ -0.85
RAPGEF3-203ENST00000395360 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.85
RAPGEF3-203ENST00000395360 C20orf197Q8N268 126 aa9.71□□□□□ -0.85
RAPGEF3-203ENST00000395360 IGKV4-1P06312 121 aa9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 DNAH6Q9C0G6 4158 aa9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 SEC61GP60059 68 aa9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 Q6ZR54 194 aa9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 SPRR4Q96PI1 79 aa9.7□□□□□ -0.86
RAPGEF3-203ENST00000395360 F8WEM9 126 aa9.69□□□□□ -0.86
RAPGEF3-203ENST00000395360 V9GYY9 64 aa9.68□□□□□ -0.86
RAPGEF3-203ENST00000395360 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
RAPGEF3-203ENST00000395360 A0A0G2JQZ4 141 aa9.67□□□□□ -0.86
RAPGEF3-203ENST00000395360 SRRM2Q9UQ35 2752 aaKnown RBP9.67□□□□□ -0.86
RAPGEF3-203ENST00000395360 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
RAPGEF3-203ENST00000395360 PANO1I0J062 215 aa9.65□□□□□ -0.87
RAPGEF3-203ENST00000395360 IGFL1Q6UW32 110 aa9.65□□□□□ -0.87
RAPGEF3-203ENST00000395360 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
RAPGEF3-203ENST00000395360 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
RAPGEF3-203ENST00000395360 SACSQ9NZJ4 4579 aa9.63□□□□□ -0.87
RAPGEF3-203ENST00000395360 H7BZZ5 65 aa9.63□□□□□ -0.87
RAPGEF3-203ENST00000395360 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
RAPGEF3-203ENST00000395360 UBE2AP49459 152 aa9.62□□□□□ -0.87
RAPGEF3-203ENST00000395360 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
RAPGEF3-203ENST00000395360 HYDINQ4G0P3 5121 aa9.61□□□□□ -0.87
RAPGEF3-203ENST00000395360 H0Y9J4 135 aa9.61□□□□□ -0.87
RAPGEF3-203ENST00000395360 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
RAPGEF3-203ENST00000395360 FP248Q71RG6 208 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF3-203ENST00000395360 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
RAPGEF3-203ENST00000395360 RYR2Q92736 4967 aa9.6□□□□□ -0.87
RAPGEF3-203ENST00000395360 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
RAPGEF3-203ENST00000395360 IGLV8-61A0A075B6I0 122 aa9.6□□□□□ -0.87
RAPGEF3-203ENST00000395360 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
RAPGEF3-203ENST00000395360 DSCR10P59022 87 aa9.58□□□□□ -0.88
RAPGEF3-203ENST00000395360 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
RAPGEF3-203ENST00000395360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
RAPGEF3-203ENST00000395360 A0A087WTM6 91 aa9.57□□□□□ -0.88
RAPGEF3-203ENST00000395360 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
RAPGEF3-203ENST00000395360 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
RAPGEF3-203ENST00000395360 A0A087WSZ3 146 aa9.56□□□□□ -0.88
RAPGEF3-203ENST00000395360 K7EQZ3 153 aa9.56□□□□□ -0.88
RAPGEF3-203ENST00000395360 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
RAPGEF3-203ENST00000395360 SPRR1BP22528 89 aa9.55□□□□□ -0.88
RAPGEF3-203ENST00000395360 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
RAPGEF3-203ENST00000395360 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
RAPGEF3-203ENST00000395360 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
RAPGEF3-203ENST00000395360 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
RAPGEF3-203ENST00000395360 RTL8CO15255 209 aa9.52□□□□□ -0.89
RAPGEF3-203ENST00000395360 KRTAP13-1Q8IUC0 172 aa9.52□□□□□ -0.89
RAPGEF3-203ENST00000395360 NDUFC1O43677 76 aa9.5□□□□□ -0.89
RAPGEF3-203ENST00000395360 FAM30AQ9NZY2 134 aa9.5□□□□□ -0.89
RAPGEF3-203ENST00000395360 DNAH17Q9UFH2 4485 aa9.47□□□□□ -0.89
RAPGEF3-203ENST00000395360 RYR3Q15413 4870 aa9.47□□□□□ -0.89
RAPGEF3-203ENST00000395360 HCG22E2RYF7 251 aa9.46□□□□□ -0.9
RAPGEF3-203ENST00000395360 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
RAPGEF3-203ENST00000395360 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
RAPGEF3-203ENST00000395360 PSORS1C2Q9UIG4 136 aa9.42□□□□□ -0.9
RAPGEF3-203ENST00000395360 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
RAPGEF3-203ENST00000395360 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
RAPGEF3-203ENST00000395360 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
RAPGEF3-203ENST00000395360 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
RAPGEF3-203ENST00000395360 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
RAPGEF3-203ENST00000395360 LINC00472Q9H8W2 130 aa9.39□□□□□ -0.91
RAPGEF3-203ENST00000395360 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
RAPGEF3-203ENST00000395360 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
RAPGEF3-203ENST00000395360 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
RAPGEF3-203ENST00000395360 PMAIP1Q13794 54 aa9.36□□□□□ -0.91
RAPGEF3-203ENST00000395360 PRR15Q8IV56 129 aa9.36□□□□□ -0.91
RAPGEF3-203ENST00000395360 A8MWP4 228 aa9.35□□□□□ -0.91
RAPGEF3-203ENST00000395360 ZNF706Q9Y5V0 76 aaPredicted RBP9.35□□□□□ -0.91
RAPGEF3-203ENST00000395360 ZNF861PO60384 105 aa9.34□□□□□ -0.91
RAPGEF3-203ENST00000395360 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
RAPGEF3-203ENST00000395360 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
RAPGEF3-203ENST00000395360 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
RAPGEF3-203ENST00000395360 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
RAPGEF3-203ENST00000395360 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
RAPGEF3-203ENST00000395360 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
RAPGEF3-203ENST00000395360 CASC2Q6XLA1 102 aa9.31□□□□□ -0.92
RAPGEF3-203ENST00000395360 MOBPQ13875 183 aa9.31□□□□□ -0.92
RAPGEF3-203ENST00000395360 PKD1P98161 4303 aa9.3□□□□□ -0.92
RAPGEF3-203ENST00000395360 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
RAPGEF3-203ENST00000395360 Q96NJ1 140 aa9.28□□□□□ -0.92
RAPGEF3-203ENST00000395360 NDUFB1O75438 58 aa9.26□□□□□ -0.93
RAPGEF3-203ENST00000395360 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
RAPGEF3-203ENST00000395360 MP68P56378 58 aa9.24□□□□□ -0.93
RAPGEF3-203ENST00000395360 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
RAPGEF3-203ENST00000395360 CD164Q04900 197 aa9.23□□□□□ -0.93
RAPGEF3-203ENST00000395360 CIRBP-AS1Q8TBR5 109 aa9.23□□□□□ -0.93
RAPGEF3-203ENST00000395360 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms