RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
CPSF7-202ENST00000394888 TMEM258P61165 79 aa9.55□□□□□ -0.88
CPSF7-202ENST00000394888 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
CPSF7-202ENST00000394888 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
CPSF7-202ENST00000394888 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
CPSF7-202ENST00000394888 LINC00476Q8WZB0 136 aa9.54□□□□□ -0.88
CPSF7-202ENST00000394888 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-202ENST00000394888 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
CPSF7-202ENST00000394888 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
CPSF7-202ENST00000394888 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
CPSF7-202ENST00000394888 A0A1B0GW54 56 aa9.52□□□□□ -0.89
CPSF7-202ENST00000394888 RPS28P62857 69 aaKnown RBP9.51□□□□□ -0.89
CPSF7-202ENST00000394888 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
CPSF7-202ENST00000394888 UBE2BP63146 152 aa9.51□□□□□ -0.89
CPSF7-202ENST00000394888 NREPQ16612 68 aa9.51□□□□□ -0.89
CPSF7-202ENST00000394888 LCE6AA0A183 80 aa9.49□□□□□ -0.89
CPSF7-202ENST00000394888 H0Y9J4 135 aa9.49□□□□□ -0.89
CPSF7-202ENST00000394888 SPRR1BP22528 89 aa9.49□□□□□ -0.89
CPSF7-202ENST00000394888 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
CPSF7-202ENST00000394888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.89
CPSF7-202ENST00000394888 K7EQZ3 153 aa9.46□□□□□ -0.9
CPSF7-202ENST00000394888 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPSF7-202ENST00000394888 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
CPSF7-202ENST00000394888 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
CPSF7-202ENST00000394888 PSCAO43653 123 aa9.44□□□□□ -0.9
CPSF7-202ENST00000394888 A0A0U1RQV1 116 aa9.43□□□□□ -0.9
CPSF7-202ENST00000394888 J3KT08 172 aa9.43□□□□□ -0.9
CPSF7-202ENST00000394888 TGP01266 2768 aa9.43□□□□□ -0.9
CPSF7-202ENST00000394888 Q5XG85 94 aa9.41□□□□□ -0.9
CPSF7-202ENST00000394888 LRP1BQ9NZR2 4599 aa9.4□□□□□ -0.9
CPSF7-202ENST00000394888 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
CPSF7-202ENST00000394888 Q6ZR54 194 aa9.4□□□□□ -0.9
CPSF7-202ENST00000394888 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.9
CPSF7-202ENST00000394888 NUPR2A6NF83 97 aa9.4□□□□□ -0.91
CPSF7-202ENST00000394888 SVIPQ8NHG7 77 aa9.39□□□□□ -0.91
CPSF7-202ENST00000394888 TMEM254Q8TBM7 123 aa9.38□□□□□ -0.91
CPSF7-202ENST00000394888 F8WEM9 126 aa9.37□□□□□ -0.91
CPSF7-202ENST00000394888 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
CPSF7-202ENST00000394888 DEFB116Q30KQ4 102 aa9.36□□□□□ -0.91
CPSF7-202ENST00000394888 A0A087WTM6 91 aa9.36□□□□□ -0.91
CPSF7-202ENST00000394888 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-202ENST00000394888 FAM236DA0A1B0GTK5 79 aa9.35□□□□□ -0.91
CPSF7-202ENST00000394888 FAM236CP0DP71 79 aa9.35□□□□□ -0.91
CPSF7-202ENST00000394888 LINC00472Q9H8W2 130 aa9.34□□□□□ -0.91
CPSF7-202ENST00000394888 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
CPSF7-202ENST00000394888 A0A087WSZ3 146 aa9.33□□□□□ -0.92
CPSF7-202ENST00000394888 Q96NJ1 140 aa9.33□□□□□ -0.92
CPSF7-202ENST00000394888 FAM30AQ9NZY2 134 aa9.33□□□□□ -0.92
CPSF7-202ENST00000394888 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
CPSF7-202ENST00000394888 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
CPSF7-202ENST00000394888 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
CPSF7-202ENST00000394888 UBE2AP49459 152 aa9.31□□□□□ -0.92
CPSF7-202ENST00000394888 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
CPSF7-202ENST00000394888 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
CPSF7-202ENST00000394888 FP248Q71RG6 208 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-202ENST00000394888 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
CPSF7-202ENST00000394888 SERP1Q9Y6X1 66 aa9.26□□□□□ -0.93
CPSF7-202ENST00000394888 NDUFC1O43677 76 aa9.25□□□□□ -0.93
CPSF7-202ENST00000394888 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
CPSF7-202ENST00000394888 RTL8CO15255 209 aa9.25□□□□□ -0.93
CPSF7-202ENST00000394888 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
CPSF7-202ENST00000394888 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
CPSF7-202ENST00000394888 IGLV5-52A0A0A0MRZ9 124 aa9.24□□□□□ -0.93
CPSF7-202ENST00000394888 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
CPSF7-202ENST00000394888 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
CPSF7-202ENST00000394888 ASB16-AS1Q495Z4 193 aa9.23□□□□□ -0.93
CPSF7-202ENST00000394888 MOBPQ13875 183 aa9.21□□□□□ -0.93
CPSF7-202ENST00000394888 PRR15Q8IV56 129 aa9.21□□□□□ -0.93
CPSF7-202ENST00000394888 A8MWP4 228 aa9.19□□□□□ -0.94
CPSF7-202ENST00000394888 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
CPSF7-202ENST00000394888 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
CPSF7-202ENST00000394888 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
CPSF7-202ENST00000394888 WFDC13Q8IUB5 93 aa9.16□□□□□ -0.94
CPSF7-202ENST00000394888 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-202ENST00000394888 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
CPSF7-202ENST00000394888 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
CPSF7-202ENST00000394888 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
CPSF7-202ENST00000394888 ZNF861PO60384 105 aa9.11□□□□□ -0.95
CPSF7-202ENST00000394888 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
CPSF7-202ENST00000394888 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
CPSF7-202ENST00000394888 A0A087X002 238 aa9.08□□□□□ -0.96
CPSF7-202ENST00000394888 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
CPSF7-202ENST00000394888 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
CPSF7-202ENST00000394888 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
CPSF7-202ENST00000394888 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
CPSF7-202ENST00000394888 PKHD1L1Q86WI1 4243 aa9.06□□□□□ -0.96
CPSF7-202ENST00000394888 Q6ZSA8 131 aa9.06□□□□□ -0.96
CPSF7-202ENST00000394888 IGLV7-43P04211 117 aa9.04□□□□□ -0.96
CPSF7-202ENST00000394888 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
CPSF7-202ENST00000394888 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
CPSF7-202ENST00000394888 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
CPSF7-202ENST00000394888 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
CPSF7-202ENST00000394888 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
CPSF7-202ENST00000394888 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
CPSF7-202ENST00000394888 ZNF706Q9Y5V0 76 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-202ENST00000394888 H0Y9P7 68 aa8.99□□□□□ -0.97
CPSF7-202ENST00000394888 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
CPSF7-202ENST00000394888 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
CPSF7-202ENST00000394888 LY6G6CO95867 125 aa8.99□□□□□ -0.97
CPSF7-202ENST00000394888 KRTAP10-1P60331 282 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms