RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 ZCCHC13Q8WW36 166 aaKnown RBP8.79□□□□□ -1
GAP43-202ENST00000393780 NOTCH1P46531 2555 aa8.78□□□□□ -1
GAP43-202ENST00000393780 APLNQ9ULZ1 77 aa8.78□□□□□ -1
GAP43-202ENST00000393780 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
GAP43-202ENST00000393780 UBE2AP49459 152 aa8.76□□□□□ -1.01
GAP43-202ENST00000393780 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
GAP43-202ENST00000393780 DYNC2H1Q8NCM8 4307 aaKnown RBP8.76□□□□□ -1.01
GAP43-202ENST00000393780 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.74□□□□□ -1.01
GAP43-202ENST00000393780 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
GAP43-202ENST00000393780 A0A087WSZ3 146 aa8.74□□□□□ -1.01
GAP43-202ENST00000393780 PHF5AQ7RTV0 110 aaKnown RBP8.74□□□□□ -1.01
GAP43-202ENST00000393780 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
GAP43-202ENST00000393780 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
GAP43-202ENST00000393780 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
GAP43-202ENST00000393780 LINC00474Q9P2X8 69 aa8.72□□□□□ -1.01
GAP43-202ENST00000393780 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.01
GAP43-202ENST00000393780 CHTF8P0CG12 524 aa8.71□□□□□ -1.02
GAP43-202ENST00000393780 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
GAP43-202ENST00000393780 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
GAP43-202ENST00000393780 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
GAP43-202ENST00000393780 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
GAP43-202ENST00000393780 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
GAP43-202ENST00000393780 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
GAP43-202ENST00000393780 DEFB116Q30KQ4 102 aa8.67□□□□□ -1.02
GAP43-202ENST00000393780 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 CYP4F30PQ9H0H9 118 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 NBDYA0A0U1RRE5 68 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 NDUFB1O75438 58 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 WFDC13Q8IUB5 93 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 PRR15Q8IV56 129 aa8.66□□□□□ -1.02
GAP43-202ENST00000393780 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
GAP43-202ENST00000393780 A8MWP4 228 aa8.64□□□□□ -1.03
GAP43-202ENST00000393780 MP68P56378 58 aa8.64□□□□□ -1.03
GAP43-202ENST00000393780 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
GAP43-202ENST00000393780 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
GAP43-202ENST00000393780 H3BPC8 53 aa8.64□□□□□ -1.03
GAP43-202ENST00000393780 RPL37AP61513 92 aaKnown RBP8.64□□□□□ -1.03
GAP43-202ENST00000393780 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
GAP43-202ENST00000393780 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
GAP43-202ENST00000393780 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
GAP43-202ENST00000393780 TRAV22A0A0B4J277 110 aa8.6□□□□□ -1.03
GAP43-202ENST00000393780 NUPR2A6NF83 97 aa8.6□□□□□ -1.03
GAP43-202ENST00000393780 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
GAP43-202ENST00000393780 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
GAP43-202ENST00000393780 PANO1I0J062 215 aa8.58□□□□□ -1.04
GAP43-202ENST00000393780 MPLKIPQ8TAP9 179 aa8.58□□□□□ -1.04
GAP43-202ENST00000393780 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
GAP43-202ENST00000393780 LYSTQ99698 3801 aa8.58□□□□□ -1.04
GAP43-202ENST00000393780 COL7A1Q02388 2944 aa8.57□□□□□ -1.04
GAP43-202ENST00000393780 MDFIQ99750 246 aa8.57□□□□□ -1.04
GAP43-202ENST00000393780 H0Y9P7 68 aa8.56□□□□□ -1.04
GAP43-202ENST00000393780 Q1T7F1 81 aa8.56□□□□□ -1.04
GAP43-202ENST00000393780 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
GAP43-202ENST00000393780 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
GAP43-202ENST00000393780 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
GAP43-202ENST00000393780 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
GAP43-202ENST00000393780 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
GAP43-202ENST00000393780 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
GAP43-202ENST00000393780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
GAP43-202ENST00000393780 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
GAP43-202ENST00000393780 Q96NJ1 140 aa8.52□□□□□ -1.05
GAP43-202ENST00000393780 ZNF706Q9Y5V0 76 aaPredicted RBP8.52□□□□□ -1.05
GAP43-202ENST00000393780 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
GAP43-202ENST00000393780 DNAH7Q8WXX0 4024 aa8.51□□□□□ -1.05
GAP43-202ENST00000393780 A0A087WTM6 91 aa8.5□□□□□ -1.05
GAP43-202ENST00000393780 MOBPQ13875 183 aa8.49□□□□□ -1.05
GAP43-202ENST00000393780 PRR4Q16378 134 aa8.48□□□□□ -1.05
GAP43-202ENST00000393780 CSMD3Q7Z407 3707 aa8.48□□□□□ -1.05
GAP43-202ENST00000393780 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
GAP43-202ENST00000393780 BRK1Q8WUW1 75 aa8.48□□□□□ -1.05
GAP43-202ENST00000393780 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
GAP43-202ENST00000393780 TP53AIP1Q9HCN2 124 aa8.46□□□□□ -1.05
GAP43-202ENST00000393780 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.06
GAP43-202ENST00000393780 V9GYY9 64 aa8.46□□□□□ -1.06
GAP43-202ENST00000393780 IGLV5-52A0A0A0MRZ9 124 aa8.45□□□□□ -1.06
GAP43-202ENST00000393780 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
GAP43-202ENST00000393780 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
GAP43-202ENST00000393780 RTL8CO15255 209 aa8.44□□□□□ -1.06
GAP43-202ENST00000393780 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
GAP43-202ENST00000393780 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
GAP43-202ENST00000393780 PSORS1C2Q9UIG4 136 aa8.44□□□□□ -1.06
GAP43-202ENST00000393780 DNAH17Q9UFH2 4485 aa8.43□□□□□ -1.06
GAP43-202ENST00000393780 ZNF861PO60384 105 aa8.42□□□□□ -1.06
GAP43-202ENST00000393780 Q6ZR54 194 aa8.42□□□□□ -1.06
GAP43-202ENST00000393780 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
GAP43-202ENST00000393780 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
GAP43-202ENST00000393780 HECTD4Q9Y4D8 3996 aa8.4□□□□□ -1.06
GAP43-202ENST00000393780 TENM2Q9NT68 2774 aa8.4□□□□□ -1.06
GAP43-202ENST00000393780 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
GAP43-202ENST00000393780 C1orf195Q5TG92 126 aa8.38□□□□□ -1.07
GAP43-202ENST00000393780 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
GAP43-202ENST00000393780 PRKDCP78527 4128 aaKnown RBP8.36□□□□□ -1.07
GAP43-202ENST00000393780 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
GAP43-202ENST00000393780 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
GAP43-202ENST00000393780 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
GAP43-202ENST00000393780 PSPHP1O15172 72 aa8.35□□□□□ -1.07
GAP43-202ENST00000393780 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
GAP43-202ENST00000393780 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
GAP43-202ENST00000393780 CD164Q04900 197 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms