RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 FAM218AQ96MZ4 157 aa6.78□□□□□ -1.32
PDGFD-202ENST00000393158 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
PDGFD-202ENST00000393158 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
PDGFD-202ENST00000393158 SMIM11BQ8TCY0 68 aa6.77□□□□□ -1.33
PDGFD-202ENST00000393158 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
PDGFD-202ENST00000393158 CD164Q04900 197 aa6.76□□□□□ -1.33
PDGFD-202ENST00000393158 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
PDGFD-202ENST00000393158 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
PDGFD-202ENST00000393158 C14orf177Q52M58 125 aa6.76□□□□□ -1.33
PDGFD-202ENST00000393158 TRBV10-3A0A0K0K1G6 114 aa6.75□□□□□ -1.33
PDGFD-202ENST00000393158 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
PDGFD-202ENST00000393158 A8MU10 97 aa6.75□□□□□ -1.33
PDGFD-202ENST00000393158 SPRR1AP35321 89 aa6.75□□□□□ -1.33
PDGFD-202ENST00000393158 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
PDGFD-202ENST00000393158 TNXBP22105 4242 aa6.74□□□□□ -1.33
PDGFD-202ENST00000393158 IGLV1-50A0A075B6I6 118 aa6.74□□□□□ -1.33
PDGFD-202ENST00000393158 H7BZZ5 65 aa6.73□□□□□ -1.33
PDGFD-202ENST00000393158 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
PDGFD-202ENST00000393158 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
PDGFD-202ENST00000393158 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
PDGFD-202ENST00000393158 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
PDGFD-202ENST00000393158 IGKV2-24A0A0C4DH68 120 aa6.7□□□□□ -1.34
PDGFD-202ENST00000393158 M0R378 163 aa6.7□□□□□ -1.34
PDGFD-202ENST00000393158 A0A087WYN8 130 aa6.7□□□□□ -1.34
PDGFD-202ENST00000393158 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
PDGFD-202ENST00000393158 COPS9Q8WXC6 57 aa6.7□□□□□ -1.34
PDGFD-202ENST00000393158 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
PDGFD-202ENST00000393158 IGLV5-52A0A0A0MRZ9 124 aa6.69□□□□□ -1.34
PDGFD-202ENST00000393158 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
PDGFD-202ENST00000393158 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
PDGFD-202ENST00000393158 FAT3Q8TDW7 4589 aa6.68□□□□□ -1.34
PDGFD-202ENST00000393158 Q9BRP9 147 aa6.68□□□□□ -1.34
PDGFD-202ENST00000393158 RPL37AP8A6NKH3 93 aa6.68□□□□□ -1.34
PDGFD-202ENST00000393158 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
PDGFD-202ENST00000393158 KRTAP10-4P60372 401 aaPredicted RBP6.67□□□□□ -1.34
PDGFD-202ENST00000393158 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
PDGFD-202ENST00000393158 ELOF1P60002 83 aaKnown RBP6.66□□□□□ -1.34
PDGFD-202ENST00000393158 C6orf99Q4VX62 202 aa6.66□□□□□ -1.34
PDGFD-202ENST00000393158 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
PDGFD-202ENST00000393158 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
PDGFD-202ENST00000393158 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
PDGFD-202ENST00000393158 UBL5Q9BZL1 73 aa6.65□□□□□ -1.34
PDGFD-202ENST00000393158 ZNF73O43830 326 aaPredicted RBP6.65□□□□□ -1.35
PDGFD-202ENST00000393158 Q6JHZ5 121 aa6.64□□□□□ -1.35
PDGFD-202ENST00000393158 LINC00575Q6W349 94 aa6.63□□□□□ -1.35
PDGFD-202ENST00000393158 CHKB-CPT1BH3BT56 60 aa6.62□□□□□ -1.35
PDGFD-202ENST00000393158 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
PDGFD-202ENST00000393158 A8MUN3 132 aa6.61□□□□□ -1.35
PDGFD-202ENST00000393158 Q6ZRX8 168 aa6.61□□□□□ -1.35
PDGFD-202ENST00000393158 PRYO14603 147 aa6.61□□□□□ -1.35
PDGFD-202ENST00000393158 Q8N9L7 120 aa6.61□□□□□ -1.35
PDGFD-202ENST00000393158 LAMTOR3Q9UHA4 124 aa6.6□□□□□ -1.35
PDGFD-202ENST00000393158 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.35
PDGFD-202ENST00000393158 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
PDGFD-202ENST00000393158 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
PDGFD-202ENST00000393158 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
PDGFD-202ENST00000393158 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
PDGFD-202ENST00000393158 HERC2O95714 4834 aa6.58□□□□□ -1.36
PDGFD-202ENST00000393158 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
PDGFD-202ENST00000393158 OBSCN-AS1Q96MR7 158 aa6.57□□□□□ -1.36
PDGFD-202ENST00000393158 H0Y9J4 135 aa6.57□□□□□ -1.36
PDGFD-202ENST00000393158 DIRC1Q969H9 104 aa6.57□□□□□ -1.36
PDGFD-202ENST00000393158 H0YGX0 51 aa6.56□□□□□ -1.36
PDGFD-202ENST00000393158 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
PDGFD-202ENST00000393158 PRLHP81277 87 aa6.55□□□□□ -1.36
PDGFD-202ENST00000393158 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
PDGFD-202ENST00000393158 PRR15Q8IV56 129 aa6.55□□□□□ -1.36
PDGFD-202ENST00000393158 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
PDGFD-202ENST00000393158 IGLV5-48A0A075B6I7 105 aa6.54□□□□□ -1.36
PDGFD-202ENST00000393158 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
PDGFD-202ENST00000393158 A6NED7 52 aa6.54□□□□□ -1.36
PDGFD-202ENST00000393158 SMIM29Q86T20 159 aa6.54□□□□□ -1.36
PDGFD-202ENST00000393158 COX7BP24311 80 aa6.53□□□□□ -1.36
PDGFD-202ENST00000393158 BCE1O60756 84 aa6.53□□□□□ -1.36
PDGFD-202ENST00000393158 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
PDGFD-202ENST00000393158 Q8N377 158 aa6.53□□□□□ -1.36
PDGFD-202ENST00000393158 ORMDL1Q9P0S3 153 aa6.53□□□□□ -1.36
PDGFD-202ENST00000393158 NREPQ16612 68 aa6.52□□□□□ -1.37
PDGFD-202ENST00000393158 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
PDGFD-202ENST00000393158 Q6ZQY7 126 aa6.51□□□□□ -1.37
PDGFD-202ENST00000393158 TRAV22A0A0B4J277 110 aa6.5□□□□□ -1.37
PDGFD-202ENST00000393158 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
PDGFD-202ENST00000393158 KLKP1Q107X0 134 aa6.49□□□□□ -1.37
PDGFD-202ENST00000393158 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
PDGFD-202ENST00000393158 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
PDGFD-202ENST00000393158 HCG22E2RYF7 251 aa6.49□□□□□ -1.37
PDGFD-202ENST00000393158 KRTAP1-4P0C5Y4 121 aa6.48□□□□□ -1.37
PDGFD-202ENST00000393158 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.48□□□□□ -1.37
PDGFD-202ENST00000393158 BPY2O14599 106 aa6.47□□□□□ -1.37
PDGFD-202ENST00000393158 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
PDGFD-202ENST00000393158 SPRR1BP22528 89 aa6.47□□□□□ -1.37
PDGFD-202ENST00000393158 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
PDGFD-202ENST00000393158 UBE2BP63146 152 aa6.46□□□□□ -1.37
PDGFD-202ENST00000393158 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
PDGFD-202ENST00000393158 ZNF861PO60384 105 aa6.45□□□□□ -1.38
PDGFD-202ENST00000393158 C1orf64Q8NEQ6 169 aa6.45□□□□□ -1.38
PDGFD-202ENST00000393158 ETDCA0A1B0GVM5 59 aa6.45□□□□□ -1.38
PDGFD-202ENST00000393158 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
PDGFD-202ENST00000393158 NDUFC1O43677 76 aa6.44□□□□□ -1.38
PDGFD-202ENST00000393158 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms