RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KRTAP13-1Q8IUC0 172 aa8.86□□□□□ -0.99
MKS1-203ENST00000393120 DPH3Q96FX2 82 aa8.86□□□□□ -0.99
MKS1-203ENST00000393120 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
MKS1-203ENST00000393120 RTL8CO15255 209 aa8.82□□□□□ -1
MKS1-203ENST00000393120 Q8N9L7 120 aa8.82□□□□□ -1
MKS1-203ENST00000393120 PRKDCP78527 4128 aaKnown RBP8.82□□□□□ -1
MKS1-203ENST00000393120 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
MKS1-203ENST00000393120 CYSTM1Q9H1C7 97 aa8.81□□□□□ -1
MKS1-203ENST00000393120 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
MKS1-203ENST00000393120 STARD9Q9P2P6 4700 aa8.81□□□□□ -1
MKS1-203ENST00000393120 MEGF8Q7Z7M0 2845 aa8.8□□□□□ -1
MKS1-203ENST00000393120 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
MKS1-203ENST00000393120 TMEM258P61165 79 aa8.78□□□□□ -1
MKS1-203ENST00000393120 A0A0G2JQZ4 141 aa8.78□□□□□ -1
MKS1-203ENST00000393120 DSCR10P59022 87 aa8.78□□□□□ -1
MKS1-203ENST00000393120 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
MKS1-203ENST00000393120 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
MKS1-203ENST00000393120 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
MKS1-203ENST00000393120 A0A087WSZ3 146 aa8.74□□□□□ -1.01
MKS1-203ENST00000393120 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
MKS1-203ENST00000393120 LY6G6CO95867 125 aa8.74□□□□□ -1.01
MKS1-203ENST00000393120 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
MKS1-203ENST00000393120 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
MKS1-203ENST00000393120 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.02
MKS1-203ENST00000393120 K7EQZ3 153 aa8.7□□□□□ -1.02
MKS1-203ENST00000393120 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
MKS1-203ENST00000393120 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
MKS1-203ENST00000393120 WWC2-AS2Q96NR7 200 aa8.7□□□□□ -1.02
MKS1-203ENST00000393120 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
MKS1-203ENST00000393120 DNHD1Q96M86 4753 aa8.69□□□□□ -1.02
MKS1-203ENST00000393120 ZNF861PO60384 105 aa8.68□□□□□ -1.02
MKS1-203ENST00000393120 H7BZZ5 65 aa8.68□□□□□ -1.02
MKS1-203ENST00000393120 NDUFC1O43677 76 aa8.67□□□□□ -1.02
MKS1-203ENST00000393120 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
MKS1-203ENST00000393120 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
MKS1-203ENST00000393120 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
MKS1-203ENST00000393120 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 LCE6AA0A183 80 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 J3KT08 172 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
MKS1-203ENST00000393120 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
MKS1-203ENST00000393120 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
MKS1-203ENST00000393120 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
MKS1-203ENST00000393120 A8MWP4 228 aa8.61□□□□□ -1.03
MKS1-203ENST00000393120 PRR15Q8IV56 129 aa8.61□□□□□ -1.03
MKS1-203ENST00000393120 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
MKS1-203ENST00000393120 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
MKS1-203ENST00000393120 FAM236CP0DP71 79 aa8.6□□□□□ -1.03
MKS1-203ENST00000393120 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
MKS1-203ENST00000393120 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
MKS1-203ENST00000393120 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
MKS1-203ENST00000393120 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
MKS1-203ENST00000393120 DNAH17Q9UFH2 4485 aa8.59□□□□□ -1.03
MKS1-203ENST00000393120 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
MKS1-203ENST00000393120 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
MKS1-203ENST00000393120 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
MKS1-203ENST00000393120 Q6ZSA8 131 aa8.56□□□□□ -1.04
MKS1-203ENST00000393120 MOBPQ13875 183 aa8.55□□□□□ -1.04
MKS1-203ENST00000393120 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
MKS1-203ENST00000393120 Q96NJ1 140 aa8.54□□□□□ -1.04
MKS1-203ENST00000393120 TGP01266 2768 aa8.54□□□□□ -1.04
MKS1-203ENST00000393120 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
MKS1-203ENST00000393120 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
MKS1-203ENST00000393120 NDUFB1O75438 58 aa8.52□□□□□ -1.04
MKS1-203ENST00000393120 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.04
MKS1-203ENST00000393120 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
MKS1-203ENST00000393120 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
MKS1-203ENST00000393120 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
MKS1-203ENST00000393120 ALMS1Q8TCU4 4167 aa8.5□□□□□ -1.05
MKS1-203ENST00000393120 OXTP01178 125 aa8.49□□□□□ -1.05
MKS1-203ENST00000393120 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
MKS1-203ENST00000393120 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
MKS1-203ENST00000393120 CD164Q04900 197 aa8.48□□□□□ -1.05
MKS1-203ENST00000393120 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
MKS1-203ENST00000393120 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
MKS1-203ENST00000393120 MP68P56378 58 aa8.44□□□□□ -1.06
MKS1-203ENST00000393120 hDV103S1A0JD37 113 aa8.44□□□□□ -1.06
MKS1-203ENST00000393120 H3BPC8 53 aa8.44□□□□□ -1.06
MKS1-203ENST00000393120 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
MKS1-203ENST00000393120 A0A1B0GVX0 72 aa8.42□□□□□ -1.06
MKS1-203ENST00000393120 FRAS1Q86XX4 4008 aa8.42□□□□□ -1.06
MKS1-203ENST00000393120 C8orf17Q9NRJ1 99 aa8.42□□□□□ -1.06
MKS1-203ENST00000393120 FAM229BQ4G0N7 80 aa8.41□□□□□ -1.06
MKS1-203ENST00000393120 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
MKS1-203ENST00000393120 TP53AIP1Q9HCN2 124 aa8.39□□□□□ -1.07
MKS1-203ENST00000393120 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
MKS1-203ENST00000393120 H0Y9P7 68 aa8.38□□□□□ -1.07
MKS1-203ENST00000393120 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
MKS1-203ENST00000393120 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
MKS1-203ENST00000393120 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
MKS1-203ENST00000393120 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
MKS1-203ENST00000393120 Q5XG85 94 aa8.35□□□□□ -1.07
MKS1-203ENST00000393120 A0A087X002 238 aa8.35□□□□□ -1.07
MKS1-203ENST00000393120 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
MKS1-203ENST00000393120 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
MKS1-203ENST00000393120 LINC00336Q6ZUF6 198 aa8.34□□□□□ -1.07
MKS1-203ENST00000393120 PKD1P98161 4303 aa8.33□□□□□ -1.08
MKS1-203ENST00000393120 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms