RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
PTN-202ENST00000393083 A0A1B0GV72 72 aa8.34□□□□□ -1.07
PTN-202ENST00000393083 H0Y9J4 135 aa8.34□□□□□ -1.07
PTN-202ENST00000393083 J3QR89 54 aa8.34□□□□□ -1.07
PTN-202ENST00000393083 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
PTN-202ENST00000393083 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.08
PTN-202ENST00000393083 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
PTN-202ENST00000393083 ST20-AS1Q8NBB2 130 aa8.32□□□□□ -1.08
PTN-202ENST00000393083 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
PTN-202ENST00000393083 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
PTN-202ENST00000393083 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
PTN-202ENST00000393083 JMJD7-PLA2G4BH0Y9G9 81 aa8.31□□□□□ -1.08
PTN-202ENST00000393083 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
PTN-202ENST00000393083 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
PTN-202ENST00000393083 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
PTN-202ENST00000393083 IGLV5-48A0A075B6I7 105 aa8.3□□□□□ -1.08
PTN-202ENST00000393083 XP32Q5T750 250 aa8.3□□□□□ -1.08
PTN-202ENST00000393083 Q8N377 158 aa8.3□□□□□ -1.08
PTN-202ENST00000393083 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
PTN-202ENST00000393083 NDUFV3P56181 108 aaKnown RBP8.28□□□□□ -1.08
PTN-202ENST00000393083 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
PTN-202ENST00000393083 RBM3P98179 157 aaKnown RBP8.26□□□□□ -1.09
PTN-202ENST00000393083 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
PTN-202ENST00000393083 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
PTN-202ENST00000393083 ZNF861PO60384 105 aa8.23□□□□□ -1.09
PTN-202ENST00000393083 GAGE2AQ6NT46 116 aa8.23□□□□□ -1.09
PTN-202ENST00000393083 DSCR8Q96T75 97 aa8.23□□□□□ -1.09
PTN-202ENST00000393083 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
PTN-202ENST00000393083 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
PTN-202ENST00000393083 LOC110117498A0A087WWA1 95 aa8.21□□□□□ -1.1
PTN-202ENST00000393083 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
PTN-202ENST00000393083 TRBV7-4A0A0J9YYF1 115 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 F8WEM9 126 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 CCKP06307 115 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 SPRR1BP22528 89 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 Q6ZQT0 140 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
PTN-202ENST00000393083 ZNF706Q9Y5V0 76 aaPredicted RBP8.2□□□□□ -1.1
PTN-202ENST00000393083 SPRR4Q96PI1 79 aa8.19□□□□□ -1.1
PTN-202ENST00000393083 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
PTN-202ENST00000393083 PDE6GP18545 87 aa8.18□□□□□ -1.1
PTN-202ENST00000393083 ACYP1P07311 99 aa8.18□□□□□ -1.1
PTN-202ENST00000393083 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
PTN-202ENST00000393083 FAT3Q8TDW7 4589 aa8.16□□□□□ -1.1
PTN-202ENST00000393083 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
PTN-202ENST00000393083 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
PTN-202ENST00000393083 C21orf62-AS1Q17RA5 79 aa8.14□□□□□ -1.11
PTN-202ENST00000393083 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
PTN-202ENST00000393083 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
PTN-202ENST00000393083 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
PTN-202ENST00000393083 LINC00846Q9NV44 126 aa8.11□□□□□ -1.11
PTN-202ENST00000393083 OXTP01178 125 aa8.1□□□□□ -1.11
PTN-202ENST00000393083 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
PTN-202ENST00000393083 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
PTN-202ENST00000393083 C9orf153Q5TBE3 101 aa8.1□□□□□ -1.11
PTN-202ENST00000393083 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
PTN-202ENST00000393083 Q6JHZ5 121 aa8.09□□□□□ -1.11
PTN-202ENST00000393083 Q8NBF4 154 aa8.09□□□□□ -1.11
PTN-202ENST00000393083 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
PTN-202ENST00000393083 A0A0G2JQZ4 141 aa8.08□□□□□ -1.12
PTN-202ENST00000393083 MOBPQ13875 183 aa8.05□□□□□ -1.12
PTN-202ENST00000393083 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
PTN-202ENST00000393083 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
PTN-202ENST00000393083 MT-ATP8P03928 68 aa8.05□□□□□ -1.12
PTN-202ENST00000393083 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
PTN-202ENST00000393083 LINC00643Q86TS7 51 aa8.05□□□□□ -1.12
PTN-202ENST00000393083 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
PTN-202ENST00000393083 TNXBP22105 4242 aa8.04□□□□□ -1.12
PTN-202ENST00000393083 SIGMAR1Q99720 223 aa8.04□□□□□ -1.12
PTN-202ENST00000393083 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
PTN-202ENST00000393083 A0A1B0GW54 56 aa8.02□□□□□ -1.13
PTN-202ENST00000393083 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
PTN-202ENST00000393083 Q6ZVQ6 151 aa8.02□□□□□ -1.13
PTN-202ENST00000393083 HERC1Q15751 4861 aa8.02□□□□□ -1.13
PTN-202ENST00000393083 CRYGAP11844 174 aa8.01□□□□□ -1.13
PTN-202ENST00000393083 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
PTN-202ENST00000393083 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
PTN-202ENST00000393083 KRTAP10-8P60410 259 aa8□□□□□ -1.13
PTN-202ENST00000393083 Q6Q795 121 aa8□□□□□ -1.13
PTN-202ENST00000393083 A0A087X002 238 aa7.98□□□□□ -1.13
PTN-202ENST00000393083 A0A087WSZ3 146 aa7.97□□□□□ -1.13
PTN-202ENST00000393083 IGKV3D-7A0A0C4DH55 119 aa7.97□□□□□ -1.13
PTN-202ENST00000393083 NREPQ16612 68 aa7.97□□□□□ -1.13
PTN-202ENST00000393083 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
PTN-202ENST00000393083 TRBV7-7A0A0K0K1E9 115 aa7.97□□□□□ -1.13
PTN-202ENST00000393083 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
PTN-202ENST00000393083 HRCT1Q6UXD1 115 aa7.96□□□□□ -1.14
PTN-202ENST00000393083 SSBP3-AS1Q7Z2R9 100 aa7.95□□□□□ -1.14
PTN-202ENST00000393083 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
PTN-202ENST00000393083 CXCL6P80162 114 aa7.91□□□□□ -1.14
PTN-202ENST00000393083 BPY2O14599 106 aa7.9□□□□□ -1.14
PTN-202ENST00000393083 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
PTN-202ENST00000393083 IMUPQ9GZP8 106 aa7.9□□□□□ -1.14
PTN-202ENST00000393083 CD164Q04900 197 aa7.89□□□□□ -1.15
PTN-202ENST00000393083 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
PTN-202ENST00000393083 SS18L2Q9UHA2 77 aa7.88□□□□□ -1.15
PTN-202ENST00000393083 HIST1H4AP62805 103 aaKnown RBP7.88□□□□□ -1.15
PTN-202ENST00000393083 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
PTN-202ENST00000393083 A0A087WVE0 104 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms