RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 IGKV4-1P06312 121 aa15.88■□□□□ 0.13
SMARCD3-203ENST00000392811 UBE2AP49459 152 aa15.88■□□□□ 0.13
SMARCD3-203ENST00000392811 IGFL1Q6UW32 110 aa15.87■□□□□ 0.13
SMARCD3-203ENST00000392811 IGLV8-61A0A075B6I0 122 aa15.85■□□□□ 0.13
SMARCD3-203ENST00000392811 TRAV7A0A075B6U4 112 aa15.84■□□□□ 0.13
SMARCD3-203ENST00000392811 RTL8CO15255 209 aa15.83■□□□□ 0.12
SMARCD3-203ENST00000392811 SPRR1BP22528 89 aa15.82■□□□□ 0.12
SMARCD3-203ENST00000392811 SMIM20Q8N5G0 67 aa15.81■□□□□ 0.12
SMARCD3-203ENST00000392811 KRTAP13-1Q8IUC0 172 aa15.8■□□□□ 0.12
SMARCD3-203ENST00000392811 KMT2AQ03164 3969 aa15.78■□□□□ 0.12
SMARCD3-203ENST00000392811 DNAH2Q9P225 4427 aa15.78■□□□□ 0.12
SMARCD3-203ENST00000392811 SRRM2Q9UQ35 2752 aaKnown RBP15.76■□□□□ 0.11
SMARCD3-203ENST00000392811 C1orf134Q5TEV5 83 aa15.75■□□□□ 0.11
SMARCD3-203ENST00000392811 C20orf197Q8N268 126 aa15.74■□□□□ 0.11
SMARCD3-203ENST00000392811 HECTD4Q9Y4D8 3996 aa15.73■□□□□ 0.11
SMARCD3-203ENST00000392811 DNAH17Q9UFH2 4485 aa15.73■□□□□ 0.11
SMARCD3-203ENST00000392811 LY6G6CO95867 125 aa15.72■□□□□ 0.11
SMARCD3-203ENST00000392811 DSCR10P59022 87 aa15.71■□□□□ 0.11
SMARCD3-203ENST00000392811 FBN3Q75N90 2809 aa15.7■□□□□ 0.1
SMARCD3-203ENST00000392811 A0A087WSZ3 146 aa15.69■□□□□ 0.1
SMARCD3-203ENST00000392811 IGLV5-52A0A0A0MRZ9 124 aa15.68■□□□□ 0.1
SMARCD3-203ENST00000392811 PLAC8Q9NZF1 115 aa15.67■□□□□ 0.1
SMARCD3-203ENST00000392811 TMEM258P61165 79 aa15.65■□□□□ 0.1
SMARCD3-203ENST00000392811 TGP01266 2768 aa15.64■□□□□ 0.09
SMARCD3-203ENST00000392811 K7EQZ3 153 aa15.63■□□□□ 0.09
SMARCD3-203ENST00000392811 PSORS1C2Q9UIG4 136 aa15.63■□□□□ 0.09
SMARCD3-203ENST00000392811 OCR1Q9BZK8 76 aa15.61■□□□□ 0.09
SMARCD3-203ENST00000392811 DEFB116Q30KQ4 102 aa15.6■□□□□ 0.09
SMARCD3-203ENST00000392811 KLKP1Q107X0 134 aa15.59■□□□□ 0.09
SMARCD3-203ENST00000392811 SNURFQ9Y675 71 aa15.58■□□□□ 0.08
SMARCD3-203ENST00000392811 WWC2-AS2Q96NR7 200 aa15.55■□□□□ 0.08
SMARCD3-203ENST00000392811 LINC00483Q53H64 154 aa15.54■□□□□ 0.08
SMARCD3-203ENST00000392811 DNAH6Q9C0G6 4158 aa15.53■□□□□ 0.08
SMARCD3-203ENST00000392811 IGLV9-49A0A0B4J1Y8 123 aa15.52■□□□□ 0.08
SMARCD3-203ENST00000392811 H7BZZ5 65 aa15.52■□□□□ 0.08
SMARCD3-203ENST00000392811 KRTAP21-3Q3LHN1 58 aa15.52■□□□□ 0.08
SMARCD3-203ENST00000392811 DNAH8Q96JB1 4490 aa15.52■□□□□ 0.07
SMARCD3-203ENST00000392811 ZNF706Q9Y5V0 76 aaPredicted RBP15.5■□□□□ 0.07
SMARCD3-203ENST00000392811 TMEM254Q8TBM7 123 aa15.5■□□□□ 0.07
SMARCD3-203ENST00000392811 ZNF861PO60384 105 aa15.49■□□□□ 0.07
SMARCD3-203ENST00000392811 FAM30AQ9NZY2 134 aa15.48■□□□□ 0.07
SMARCD3-203ENST00000392811 HCG22E2RYF7 251 aa15.48■□□□□ 0.07
SMARCD3-203ENST00000392811 RPL37AP61513 92 aaKnown RBP15.48■□□□□ 0.07
SMARCD3-203ENST00000392811 KRTAP10-2P60368 255 aa15.46■□□□□ 0.07
SMARCD3-203ENST00000392811 LINC00472Q9H8W2 130 aa15.46■□□□□ 0.07
SMARCD3-203ENST00000392811 J3KT08 172 aa15.43■□□□□ 0.06
SMARCD3-203ENST00000392811 ALMS1Q8TCU4 4167 aa15.42■□□□□ 0.06
SMARCD3-203ENST00000392811 RPS28P62857 69 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-203ENST00000392811 A0A0U1RQV1 116 aa15.4■□□□□ 0.06
SMARCD3-203ENST00000392811 ANAPC11Q9NYG5 84 aa15.4■□□□□ 0.06
SMARCD3-203ENST00000392811 FAM236DA0A1B0GTK5 79 aa15.39■□□□□ 0.05
SMARCD3-203ENST00000392811 FAM236CP0DP71 79 aa15.39■□□□□ 0.05
SMARCD3-203ENST00000392811 NDUFC1O43677 76 aa15.39■□□□□ 0.05
SMARCD3-203ENST00000392811 IGLV7-43P04211 117 aa15.38■□□□□ 0.05
SMARCD3-203ENST00000392811 WFDC13Q8IUB5 93 aa15.38■□□□□ 0.05
SMARCD3-203ENST00000392811 FRAS1Q86XX4 4008 aa15.37■□□□□ 0.05
SMARCD3-203ENST00000392811 DNAH11Q96DT5 4516 aa15.37■□□□□ 0.05
SMARCD3-203ENST00000392811 A8MWP4 228 aa15.36■□□□□ 0.05
SMARCD3-203ENST00000392811 MOBPQ13875 183 aa15.36■□□□□ 0.05
SMARCD3-203ENST00000392811 PRR15Q8IV56 129 aa15.36■□□□□ 0.05
SMARCD3-203ENST00000392811 DNAH5Q8TE73 4624 aa15.36■□□□□ 0.05
SMARCD3-203ENST00000392811 CIRBP-AS1Q8TBR5 109 aa15.36■□□□□ 0.05
SMARCD3-203ENST00000392811 LCE6AA0A183 80 aa15.35■□□□□ 0.05
SMARCD3-203ENST00000392811 HRCT1Q6UXD1 115 aa15.34■□□□□ 0.05
SMARCD3-203ENST00000392811 KRTAP29-1A8MX34 341 aaPredicted RBP15.31■□□□□ 0.04
SMARCD3-203ENST00000392811 Q96NJ1 140 aa15.29■□□□□ 0.04
SMARCD3-203ENST00000392811 OXTP01178 125 aa15.29■□□□□ 0.04
SMARCD3-203ENST00000392811 HYDINQ4G0P3 5121 aa15.26■□□□□ 0.03
SMARCD3-203ENST00000392811 KRTAP10-1P60331 282 aa15.26■□□□□ 0.03
SMARCD3-203ENST00000392811 CASC2Q6XLA1 102 aa15.26■□□□□ 0.03
SMARCD3-203ENST00000392811 Q6ZSA8 131 aa15.25■□□□□ 0.03
SMARCD3-203ENST00000392811 PKD1P98161 4303 aa15.23■□□□□ 0.03
SMARCD3-203ENST00000392811 C5orf47Q569G3 176 aa15.22■□□□□ 0.03
SMARCD3-203ENST00000392811 FAT2Q9NYQ8 4349 aa15.21■□□□□ 0.03
SMARCD3-203ENST00000392811 NDUFB1O75438 58 aa15.2■□□□□ 0.02
SMARCD3-203ENST00000392811 MMP24-AS1A0A0U1RRL7 71 aa15.18■□□□□ 0.02
SMARCD3-203ENST00000392811 ZCCHC13Q8WW36 166 aaKnown RBP15.18■□□□□ 0.02
SMARCD3-203ENST00000392811 SERP1Q9Y6X1 66 aa15.18■□□□□ 0.02
SMARCD3-203ENST00000392811 ATP5EP56381 51 aaPredicted RBP15.17■□□□□ 0.02
SMARCD3-203ENST00000392811 hDV103S1A0JD37 113 aa15.09■□□□□ 0.01
SMARCD3-203ENST00000392811 MP68P56378 58 aa15.07■□□□□ 0
SMARCD3-203ENST00000392811 LRP1BQ9NZR2 4599 aa15.07■□□□□ 0
SMARCD3-203ENST00000392811 A0A1B0GVX0 72 aa15.05■□□□□ 0
SMARCD3-203ENST00000392811 SSBP3-AS1Q7Z2R9 100 aa15.05■□□□□ 0
SMARCD3-203ENST00000392811 C8orf17Q9NRJ1 99 aa15.05■□□□□ 0
SMARCD3-203ENST00000392811 ASB16-AS1Q495Z4 193 aa15.05■□□□□ -0
SMARCD3-203ENST00000392811 IGHV6-1A0A0B4J1U7 121 aa15.04■□□□□ -0
SMARCD3-203ENST00000392811 CDK2AP2O75956 126 aa15.04■□□□□ -0
SMARCD3-203ENST00000392811 CD164Q04900 197 aa15.03■□□□□ -0
SMARCD3-203ENST00000392811 H0Y9P7 68 aa15.02■□□□□ -0
SMARCD3-203ENST00000392811 LINC00208Q96KT6 92 aa15.02□□□□□ -0.01
SMARCD3-203ENST00000392811 A0A087X002 238 aa15□□□□□ -0.01
SMARCD3-203ENST00000392811 KRTAP13-2Q52LG2 175 aa14.97□□□□□ -0.01
SMARCD3-203ENST00000392811 SPINK6Q6UWN8 80 aa14.96□□□□□ -0.01
SMARCD3-203ENST00000392811 TRAV22A0A0B4J277 110 aa14.95□□□□□ -0.02
SMARCD3-203ENST00000392811 H3BPC8 53 aa14.95□□□□□ -0.02
SMARCD3-203ENST00000392811 SACSQ9NZJ4 4579 aa14.94□□□□□ -0.02
SMARCD3-203ENST00000392811 NOTCH2NLQ7Z3S9 236 aa14.93□□□□□ -0.02
SMARCD3-203ENST00000392811 FAM229BQ4G0N7 80 aa14.93□□□□□ -0.02
SMARCD3-203ENST00000392811 Q5XG85 94 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms