RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LCA10Q71F78 164 aa9.43□□□□□ -0.9
VPS9D1-201ENST00000389386 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
VPS9D1-201ENST00000389386 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
VPS9D1-201ENST00000389386 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
VPS9D1-201ENST00000389386 Q9BRP9 147 aa9.42□□□□□ -0.9
VPS9D1-201ENST00000389386 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
VPS9D1-201ENST00000389386 Q6ZRX8 168 aa9.41□□□□□ -0.9
VPS9D1-201ENST00000389386 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
VPS9D1-201ENST00000389386 A6NN06 94 aa9.41□□□□□ -0.9
VPS9D1-201ENST00000389386 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
VPS9D1-201ENST00000389386 SPART-AS1P0CW21 52 aa9.4□□□□□ -0.9
VPS9D1-201ENST00000389386 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
VPS9D1-201ENST00000389386 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
VPS9D1-201ENST00000389386 H3BS24 57 aa9.39□□□□□ -0.91
VPS9D1-201ENST00000389386 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
VPS9D1-201ENST00000389386 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
VPS9D1-201ENST00000389386 Q75L30 129 aa9.39□□□□□ -0.91
VPS9D1-201ENST00000389386 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
VPS9D1-201ENST00000389386 IGKV2D-24A0A075B6R9 120 aa9.35□□□□□ -0.91
VPS9D1-201ENST00000389386 A6NED7 52 aa9.34□□□□□ -0.91
VPS9D1-201ENST00000389386 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
VPS9D1-201ENST00000389386 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
VPS9D1-201ENST00000389386 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
VPS9D1-201ENST00000389386 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
VPS9D1-201ENST00000389386 H0Y9P7 68 aa9.33□□□□□ -0.92
VPS9D1-201ENST00000389386 H3BPC8 53 aa9.33□□□□□ -0.92
VPS9D1-201ENST00000389386 SPRR1AP35321 89 aa9.33□□□□□ -0.92
VPS9D1-201ENST00000389386 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 LINC00476Q8WZB0 136 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 DNAH3Q8TD57 4116 aa9.31□□□□□ -0.92
VPS9D1-201ENST00000389386 DNHD1Q96M86 4753 aa9.3□□□□□ -0.92
VPS9D1-201ENST00000389386 CDC42SE1Q9NRR8 79 aa9.3□□□□□ -0.92
VPS9D1-201ENST00000389386 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
VPS9D1-201ENST00000389386 COA5Q86WW8 74 aa9.28□□□□□ -0.92
VPS9D1-201ENST00000389386 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.92
VPS9D1-201ENST00000389386 IGFL1Q6UW32 110 aa9.27□□□□□ -0.92
VPS9D1-201ENST00000389386 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
VPS9D1-201ENST00000389386 CASC2Q6XLA1 102 aa9.25□□□□□ -0.93
VPS9D1-201ENST00000389386 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
VPS9D1-201ENST00000389386 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
VPS9D1-201ENST00000389386 A0A087WSZ3 146 aa9.24□□□□□ -0.93
VPS9D1-201ENST00000389386 MOBPQ13875 183 aa9.24□□□□□ -0.93
VPS9D1-201ENST00000389386 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
VPS9D1-201ENST00000389386 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
VPS9D1-201ENST00000389386 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
VPS9D1-201ENST00000389386 K7EIL1 84 aa9.23□□□□□ -0.93
VPS9D1-201ENST00000389386 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-201ENST00000389386 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.93
VPS9D1-201ENST00000389386 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.94
VPS9D1-201ENST00000389386 LINC01558Q9Y6Z2 57 aa9.2□□□□□ -0.94
VPS9D1-201ENST00000389386 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
VPS9D1-201ENST00000389386 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
VPS9D1-201ENST00000389386 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
VPS9D1-201ENST00000389386 A8MWP4 228 aa9.15□□□□□ -0.94
VPS9D1-201ENST00000389386 HUWE1Q7Z6Z7 4374 aaKnown RBP9.14□□□□□ -0.95
VPS9D1-201ENST00000389386 H3BNG1 76 aa9.14□□□□□ -0.95
VPS9D1-201ENST00000389386 SPINK7P58062 85 aa9.14□□□□□ -0.95
VPS9D1-201ENST00000389386 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
VPS9D1-201ENST00000389386 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
VPS9D1-201ENST00000389386 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
VPS9D1-201ENST00000389386 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
VPS9D1-201ENST00000389386 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
VPS9D1-201ENST00000389386 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
VPS9D1-201ENST00000389386 PCOTHQ58A44 107 aa9.11□□□□□ -0.95
VPS9D1-201ENST00000389386 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
VPS9D1-201ENST00000389386 LINC00313P59037 77 aa9.11□□□□□ -0.95
VPS9D1-201ENST00000389386 LYSTQ99698 3801 aa9.09□□□□□ -0.95
VPS9D1-201ENST00000389386 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
VPS9D1-201ENST00000389386 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
VPS9D1-201ENST00000389386 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
VPS9D1-201ENST00000389386 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
VPS9D1-201ENST00000389386 PRLHP81277 87 aa9.06□□□□□ -0.96
VPS9D1-201ENST00000389386 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
VPS9D1-201ENST00000389386 HRES1P13985 223 aa9.04□□□□□ -0.96
VPS9D1-201ENST00000389386 TGP01266 2768 aa9.04□□□□□ -0.96
VPS9D1-201ENST00000389386 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
VPS9D1-201ENST00000389386 H0Y9J4 135 aa9.03□□□□□ -0.96
VPS9D1-201ENST00000389386 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
VPS9D1-201ENST00000389386 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
VPS9D1-201ENST00000389386 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
VPS9D1-201ENST00000389386 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
VPS9D1-201ENST00000389386 Q6ZR54 194 aa9□□□□□ -0.97
VPS9D1-201ENST00000389386 CSMD3Q7Z407 3707 aa8.99□□□□□ -0.97
VPS9D1-201ENST00000389386 IGKV2-24A0A0C4DH68 120 aa8.99□□□□□ -0.97
VPS9D1-201ENST00000389386 SPRR1BP22528 89 aa8.96□□□□□ -0.97
VPS9D1-201ENST00000389386 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.97
VPS9D1-201ENST00000389386 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
VPS9D1-201ENST00000389386 PLA2G1BP04054 148 aaKnown RBP8.92□□□□□ -0.98
VPS9D1-201ENST00000389386 A0A096LNI7 61 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 Q96NJ1 140 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
VPS9D1-201ENST00000389386 KRTAP11-1Q8IUC1 163 aa8.88□□□□□ -0.99
VPS9D1-201ENST00000389386 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-201ENST00000389386 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms