RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
SCFD2-201ENST00000388940 COL7A1Q02388 2944 aa9.39□□□□□ -0.91
SCFD2-201ENST00000388940 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
SCFD2-201ENST00000388940 LRCOL1A6NCL2 159 aa9.39□□□□□ -0.91
SCFD2-201ENST00000388940 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
SCFD2-201ENST00000388940 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
SCFD2-201ENST00000388940 H0Y9J4 135 aa9.38□□□□□ -0.91
SCFD2-201ENST00000388940 PRLHP81277 87 aa9.38□□□□□ -0.91
SCFD2-201ENST00000388940 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
SCFD2-201ENST00000388940 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
SCFD2-201ENST00000388940 MDFIQ99750 246 aa9.37□□□□□ -0.91
SCFD2-201ENST00000388940 DNAH10Q8IVF4 4471 aa9.37□□□□□ -0.91
SCFD2-201ENST00000388940 OCR1Q9BZK8 76 aa9.36□□□□□ -0.91
SCFD2-201ENST00000388940 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
SCFD2-201ENST00000388940 PHF5AQ7RTV0 110 aaKnown RBP9.35□□□□□ -0.91
SCFD2-201ENST00000388940 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
SCFD2-201ENST00000388940 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
SCFD2-201ENST00000388940 SPRR1BP22528 89 aa9.33□□□□□ -0.92
SCFD2-201ENST00000388940 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
SCFD2-201ENST00000388940 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
SCFD2-201ENST00000388940 DSCR10P59022 87 aa9.33□□□□□ -0.92
SCFD2-201ENST00000388940 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
SCFD2-201ENST00000388940 LYSTQ99698 3801 aa9.33□□□□□ -0.92
SCFD2-201ENST00000388940 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
SCFD2-201ENST00000388940 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
SCFD2-201ENST00000388940 UBE2AP49459 152 aa9.3□□□□□ -0.92
SCFD2-201ENST00000388940 CD164Q04900 197 aa9.3□□□□□ -0.92
SCFD2-201ENST00000388940 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
SCFD2-201ENST00000388940 K7EQZ3 153 aa9.27□□□□□ -0.93
SCFD2-201ENST00000388940 CSMD3Q7Z407 3707 aa9.26□□□□□ -0.93
SCFD2-201ENST00000388940 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
SCFD2-201ENST00000388940 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
SCFD2-201ENST00000388940 LCE6AA0A183 80 aa9.25□□□□□ -0.93
SCFD2-201ENST00000388940 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
SCFD2-201ENST00000388940 A0A087WSZ3 146 aa9.24□□□□□ -0.93
SCFD2-201ENST00000388940 PANO1I0J062 215 aa9.24□□□□□ -0.93
SCFD2-201ENST00000388940 Q1T7F1 81 aa9.24□□□□□ -0.93
SCFD2-201ENST00000388940 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
SCFD2-201ENST00000388940 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
SCFD2-201ENST00000388940 HCG22E2RYF7 251 aa9.21□□□□□ -0.93
SCFD2-201ENST00000388940 TENM2Q9NT68 2774 aa9.19□□□□□ -0.94
SCFD2-201ENST00000388940 A0A087WTM6 91 aa9.19□□□□□ -0.94
SCFD2-201ENST00000388940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
SCFD2-201ENST00000388940 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
SCFD2-201ENST00000388940 VPS13DQ5THJ4 4388 aa9.17□□□□□ -0.94
SCFD2-201ENST00000388940 DEFB116Q30KQ4 102 aa9.16□□□□□ -0.94
SCFD2-201ENST00000388940 Q6ZR54 194 aa9.15□□□□□ -0.95
SCFD2-201ENST00000388940 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.95
SCFD2-201ENST00000388940 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
SCFD2-201ENST00000388940 STARD9Q9P2P6 4700 aa9.13□□□□□ -0.95
SCFD2-201ENST00000388940 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
SCFD2-201ENST00000388940 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
SCFD2-201ENST00000388940 RTL8CO15255 209 aa9.11□□□□□ -0.95
SCFD2-201ENST00000388940 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
SCFD2-201ENST00000388940 A8MWP4 228 aa9.11□□□□□ -0.95
SCFD2-201ENST00000388940 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
SCFD2-201ENST00000388940 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
SCFD2-201ENST00000388940 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
SCFD2-201ENST00000388940 ZNF706Q9Y5V0 76 aaPredicted RBP9.08□□□□□ -0.96
SCFD2-201ENST00000388940 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
SCFD2-201ENST00000388940 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
SCFD2-201ENST00000388940 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SCFD2-201ENST00000388940 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
SCFD2-201ENST00000388940 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
SCFD2-201ENST00000388940 TRAV22A0A0B4J277 110 aa9.05□□□□□ -0.96
SCFD2-201ENST00000388940 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
SCFD2-201ENST00000388940 DNHD1Q96M86 4753 aa9.04□□□□□ -0.96
SCFD2-201ENST00000388940 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
SCFD2-201ENST00000388940 KTN1-AS1Q86SY8 53 aa9.04□□□□□ -0.96
SCFD2-201ENST00000388940 ZNF861PO60384 105 aa9.03□□□□□ -0.96
SCFD2-201ENST00000388940 MP68P56378 58 aa9.03□□□□□ -0.96
SCFD2-201ENST00000388940 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
SCFD2-201ENST00000388940 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.97
SCFD2-201ENST00000388940 WWC2-AS2Q96NR7 200 aa9.02□□□□□ -0.97
SCFD2-201ENST00000388940 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
SCFD2-201ENST00000388940 PSPHP1O15172 72 aa9.01□□□□□ -0.97
SCFD2-201ENST00000388940 Q96NJ1 140 aa9.01□□□□□ -0.97
SCFD2-201ENST00000388940 NDUFB1O75438 58 aa9.01□□□□□ -0.97
SCFD2-201ENST00000388940 H3BPC8 53 aa9□□□□□ -0.97
SCFD2-201ENST00000388940 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
SCFD2-201ENST00000388940 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
SCFD2-201ENST00000388940 MOBPQ13875 183 aa8.97□□□□□ -0.97
SCFD2-201ENST00000388940 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.97
SCFD2-201ENST00000388940 NDUFS5O43920 106 aa8.96□□□□□ -0.97
SCFD2-201ENST00000388940 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.97
SCFD2-201ENST00000388940 H0Y9P7 68 aa8.96□□□□□ -0.98
SCFD2-201ENST00000388940 KMT2AQ03164 3969 aa8.95□□□□□ -0.98
SCFD2-201ENST00000388940 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
SCFD2-201ENST00000388940 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
SCFD2-201ENST00000388940 A8MUN3 132 aa8.93□□□□□ -0.98
SCFD2-201ENST00000388940 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
SCFD2-201ENST00000388940 Q5VV11 94 aa8.93□□□□□ -0.98
SCFD2-201ENST00000388940 LY6G6CO95867 125 aa8.91□□□□□ -0.98
SCFD2-201ENST00000388940 ANAPC11Q9NYG5 84 aa8.91□□□□□ -0.98
SCFD2-201ENST00000388940 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
SCFD2-201ENST00000388940 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
SCFD2-201ENST00000388940 LIMD2Q9BT23 127 aa8.9□□□□□ -0.98
SCFD2-201ENST00000388940 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
SCFD2-201ENST00000388940 DNAH8Q96JB1 4490 aa8.9□□□□□ -0.99
SCFD2-201ENST00000388940 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms