RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ERC2-IT1O76042 136 aa11.47□□□□□ -0.57
GTF3A-201ENST00000381140 DNAL4O96015 105 aa11.47□□□□□ -0.57
GTF3A-201ENST00000381140 TYMSOSQ8TAI1 123 aa11.47□□□□□ -0.57
GTF3A-201ENST00000381140 DHRS4-AS1Q9P1J3 65 aa11.47□□□□□ -0.57
GTF3A-201ENST00000381140 PRO0461Q9UI25 63 aa11.47□□□□□ -0.57
GTF3A-201ENST00000381140 C9JAW5 83 aa11.46□□□□□ -0.57
GTF3A-201ENST00000381140 FAM229BQ4G0N7 80 aa11.46□□□□□ -0.57
GTF3A-201ENST00000381140 KRTAP13-2Q52LG2 175 aa11.44□□□□□ -0.58
GTF3A-201ENST00000381140 F8W1H4 67 aa11.43□□□□□ -0.58
GTF3A-201ENST00000381140 GAGE2AQ6NT46 116 aa11.42□□□□□ -0.58
GTF3A-201ENST00000381140 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.42□□□□□ -0.58
GTF3A-201ENST00000381140 H3BT86 120 aa11.41□□□□□ -0.58
GTF3A-201ENST00000381140 MTURNQ8N3F0 131 aa11.41□□□□□ -0.58
GTF3A-201ENST00000381140 C3orf22Q8N5N4 141 aa11.41□□□□□ -0.58
GTF3A-201ENST00000381140 ORMDL1Q9P0S3 153 aa11.41□□□□□ -0.58
GTF3A-201ENST00000381140 SMCPP49901 116 aaPredicted RBP11.4□□□□□ -0.59
GTF3A-201ENST00000381140 Q6ZQY7 126 aa11.4□□□□□ -0.59
GTF3A-201ENST00000381140 OCIAD2Q56VL3 154 aa11.39□□□□□ -0.59
GTF3A-201ENST00000381140 H3BQ85 93 aa11.38□□□□□ -0.59
GTF3A-201ENST00000381140 ANKRD29Q8N6D5 301 aa11.38□□□□□ -0.59
GTF3A-201ENST00000381140 ST20-AS1Q8NBB2 130 aa11.38□□□□□ -0.59
GTF3A-201ENST00000381140 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
GTF3A-201ENST00000381140 GHRHP01286 108 aa11.36□□□□□ -0.59
GTF3A-201ENST00000381140 LINC00483Q53H64 154 aa11.35□□□□□ -0.59
GTF3A-201ENST00000381140 TMEM256-PLSCR3K7ERE1 68 aa11.33□□□□□ -0.6
GTF3A-201ENST00000381140 LINC00304Q8N9R0 145 aa11.33□□□□□ -0.6
GTF3A-201ENST00000381140 IGLV5-48A0A075B6I7 105 aa11.32□□□□□ -0.6
GTF3A-201ENST00000381140 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
GTF3A-201ENST00000381140 PPDPFLQ8WWR9 84 aa11.32□□□□□ -0.6
GTF3A-201ENST00000381140 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
GTF3A-201ENST00000381140 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
GTF3A-201ENST00000381140 MOBPQ13875 183 aa11.29□□□□□ -0.6
GTF3A-201ENST00000381140 DEFB105AQ8NG35 78 aa11.29□□□□□ -0.6
GTF3A-201ENST00000381140 TEN1Q86WV5 123 aa11.28□□□□□ -0.6
GTF3A-201ENST00000381140 Q8N377 158 aa11.28□□□□□ -0.6
GTF3A-201ENST00000381140 Q8NBF4 154 aa11.28□□□□□ -0.6
GTF3A-201ENST00000381140 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
GTF3A-201ENST00000381140 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.61
GTF3A-201ENST00000381140 TEX49A0A1B0GTD5 131 aa11.26□□□□□ -0.61
GTF3A-201ENST00000381140 SPRR1BP22528 89 aa11.25□□□□□ -0.61
GTF3A-201ENST00000381140 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
GTF3A-201ENST00000381140 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
GTF3A-201ENST00000381140 PRR4Q16378 134 aa11.22□□□□□ -0.61
GTF3A-201ENST00000381140 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
GTF3A-201ENST00000381140 NDUFV3P56181 108 aaKnown RBP11.2□□□□□ -0.62
GTF3A-201ENST00000381140 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
GTF3A-201ENST00000381140 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
GTF3A-201ENST00000381140 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
GTF3A-201ENST00000381140 SMIM29Q86T20 159 aa11.18□□□□□ -0.62
GTF3A-201ENST00000381140 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
GTF3A-201ENST00000381140 RBM3P98179 157 aaKnown RBP11.15□□□□□ -0.63
GTF3A-201ENST00000381140 F8WEM9 126 aa11.12□□□□□ -0.63
GTF3A-201ENST00000381140 SPINK1P00995 79 aa11.12□□□□□ -0.63
GTF3A-201ENST00000381140 C14orf132Q9NPU4 83 aa11.12□□□□□ -0.63
GTF3A-201ENST00000381140 IGLV8-61A0A075B6I0 122 aa11.11□□□□□ -0.63
GTF3A-201ENST00000381140 A0A1B0GV72 72 aa11.11□□□□□ -0.63
GTF3A-201ENST00000381140 LOC110117498A0A087WWA1 95 aa11.1□□□□□ -0.63
GTF3A-201ENST00000381140 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
GTF3A-201ENST00000381140 HRCT1Q6UXD1 115 aa11.1□□□□□ -0.63
GTF3A-201ENST00000381140 DSCR8Q96T75 97 aa11.09□□□□□ -0.63
GTF3A-201ENST00000381140 PDE6GP18545 87 aa11.08□□□□□ -0.64
GTF3A-201ENST00000381140 C21orf62-AS1Q17RA5 79 aa11.07□□□□□ -0.64
GTF3A-201ENST00000381140 J3QR89 54 aa11.06□□□□□ -0.64
GTF3A-201ENST00000381140 Q6ZQT0 140 aa11.05□□□□□ -0.64
GTF3A-201ENST00000381140 A0A0G2JQZ4 141 aa11.04□□□□□ -0.64
GTF3A-201ENST00000381140 LRP2P98164 4655 aa11.04□□□□□ -0.64
GTF3A-201ENST00000381140 K7ERU9 68 aa11.03□□□□□ -0.64
GTF3A-201ENST00000381140 Q6JHZ5 121 aa11.03□□□□□ -0.64
GTF3A-201ENST00000381140 CCKP06307 115 aa11.03□□□□□ -0.64
GTF3A-201ENST00000381140 IGLV7-46A0A075B6I9 117 aa11.02□□□□□ -0.65
GTF3A-201ENST00000381140 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
GTF3A-201ENST00000381140 FAM240AA0A1B0GVK7 77 aa11□□□□□ -0.65
GTF3A-201ENST00000381140 IGFL1Q6UW32 110 aa11□□□□□ -0.65
GTF3A-201ENST00000381140 LPAP08519 4548 aa10.99□□□□□ -0.65
GTF3A-201ENST00000381140 UBR4Q5T4S7 5183 aa10.97□□□□□ -0.65
GTF3A-201ENST00000381140 ACYP1P07311 99 aa10.96□□□□□ -0.65
GTF3A-201ENST00000381140 LIMD2Q9BT23 127 aa10.96□□□□□ -0.65
GTF3A-201ENST00000381140 A0A1W2PNM2 257 aa10.95□□□□□ -0.66
GTF3A-201ENST00000381140 CD164Q04900 197 aa10.95□□□□□ -0.66
GTF3A-201ENST00000381140 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
GTF3A-201ENST00000381140 A0A1B0GW54 56 aa10.93□□□□□ -0.66
GTF3A-201ENST00000381140 Q6Q795 121 aa10.93□□□□□ -0.66
GTF3A-201ENST00000381140 VPS25Q9BRG1 176 aa10.92□□□□□ -0.66
GTF3A-201ENST00000381140 LCE2BO14633 110 aa10.91□□□□□ -0.66
GTF3A-201ENST00000381140 TPRXLQ17RH7 258 aa10.89□□□□□ -0.67
GTF3A-201ENST00000381140 CDIP1Q9H305 208 aa10.89□□□□□ -0.67
GTF3A-201ENST00000381140 LINC00846Q9NV44 126 aa10.87□□□□□ -0.67
GTF3A-201ENST00000381140 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
GTF3A-201ENST00000381140 KRTAP13-3Q3SY46 172 aa10.82□□□□□ -0.68
GTF3A-201ENST00000381140 Q5XG85 94 aa10.81□□□□□ -0.68
GTF3A-201ENST00000381140 A0A087WSZ3 146 aa10.8□□□□□ -0.68
GTF3A-201ENST00000381140 UBL5Q9BZL1 73 aa10.8□□□□□ -0.68
GTF3A-201ENST00000381140 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
GTF3A-201ENST00000381140 Q6ZVQ6 151 aa10.77□□□□□ -0.68
GTF3A-201ENST00000381140 NREPQ16612 68 aa10.75□□□□□ -0.69
GTF3A-201ENST00000381140 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
GTF3A-201ENST00000381140 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
GTF3A-201ENST00000381140 C9orf92A6NGG3 77 aa10.72□□□□□ -0.69
GTF3A-201ENST00000381140 RNF213Q63HN8 5207 aa10.72□□□□□ -0.69
GTF3A-201ENST00000381140 ASB16-AS1Q495Z4 193 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms