RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
CLCN4-201ENST00000380829 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
CLCN4-201ENST00000380829 A0A096LNI7 61 aa9.1□□□□□ -0.95
CLCN4-201ENST00000380829 CNBPP62633 177 aaKnown RBP9.1□□□□□ -0.95
CLCN4-201ENST00000380829 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
CLCN4-201ENST00000380829 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.96
CLCN4-201ENST00000380829 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
CLCN4-201ENST00000380829 VPS13DQ5THJ4 4388 aa9.07□□□□□ -0.96
CLCN4-201ENST00000380829 PRR4Q16378 134 aa9.06□□□□□ -0.96
CLCN4-201ENST00000380829 H3BQ85 93 aa9.06□□□□□ -0.96
CLCN4-201ENST00000380829 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
CLCN4-201ENST00000380829 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
CLCN4-201ENST00000380829 A8MU10 97 aa9.05□□□□□ -0.96
CLCN4-201ENST00000380829 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-201ENST00000380829 KRTAP4-16G5E9R7 235 aaPredicted RBP9.04□□□□□ -0.96
CLCN4-201ENST00000380829 ETDCA0A1B0GVM5 59 aa9.04□□□□□ -0.96
CLCN4-201ENST00000380829 Q1T7F1 81 aa9.04□□□□□ -0.96
CLCN4-201ENST00000380829 Q6ZRX8 168 aa9.04□□□□□ -0.96
CLCN4-201ENST00000380829 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
CLCN4-201ENST00000380829 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
CLCN4-201ENST00000380829 SPRR1AP35321 89 aa9.03□□□□□ -0.96
CLCN4-201ENST00000380829 DEFB105AQ8NG35 78 aa9.03□□□□□ -0.96
CLCN4-201ENST00000380829 Q9BRP9 147 aa9.03□□□□□ -0.96
CLCN4-201ENST00000380829 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
CLCN4-201ENST00000380829 KMT2AQ03164 3969 aa9.01□□□□□ -0.97
CLCN4-201ENST00000380829 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
CLCN4-201ENST00000380829 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
CLCN4-201ENST00000380829 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
CLCN4-201ENST00000380829 A8MUN3 132 aa8.97□□□□□ -0.97
CLCN4-201ENST00000380829 Q8N377 158 aa8.97□□□□□ -0.97
CLCN4-201ENST00000380829 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
CLCN4-201ENST00000380829 UBE2BP63146 152 aa8.97□□□□□ -0.97
CLCN4-201ENST00000380829 LCE6AA0A183 80 aa8.96□□□□□ -0.98
CLCN4-201ENST00000380829 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
CLCN4-201ENST00000380829 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
CLCN4-201ENST00000380829 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
CLCN4-201ENST00000380829 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
CLCN4-201ENST00000380829 PANO1I0J062 215 aa8.94□□□□□ -0.98
CLCN4-201ENST00000380829 PRLHP81277 87 aa8.93□□□□□ -0.98
CLCN4-201ENST00000380829 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
CLCN4-201ENST00000380829 A0A087WTM6 91 aa8.93□□□□□ -0.98
CLCN4-201ENST00000380829 Q6ZR54 194 aa8.92□□□□□ -0.98
CLCN4-201ENST00000380829 K7EQZ3 153 aa8.91□□□□□ -0.98
CLCN4-201ENST00000380829 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
CLCN4-201ENST00000380829 IGLV5-48A0A075B6I7 105 aa8.9□□□□□ -0.99
CLCN4-201ENST00000380829 HECTD4Q9Y4D8 3996 aa8.9□□□□□ -0.99
CLCN4-201ENST00000380829 LY6G6CO95867 125 aa8.89□□□□□ -0.99
CLCN4-201ENST00000380829 DSCR10P59022 87 aa8.89□□□□□ -0.99
CLCN4-201ENST00000380829 Q5VV11 94 aa8.89□□□□□ -0.99
CLCN4-201ENST00000380829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
CLCN4-201ENST00000380829 CYP4F30PQ9H0H9 118 aa8.87□□□□□ -0.99
CLCN4-201ENST00000380829 RTL8CO15255 209 aa8.85□□□□□ -0.99
CLCN4-201ENST00000380829 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
CLCN4-201ENST00000380829 TNP2Q05952 138 aa8.85□□□□□ -0.99
CLCN4-201ENST00000380829 C1orf134Q5TEV5 83 aa8.85□□□□□ -0.99
CLCN4-201ENST00000380829 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
CLCN4-201ENST00000380829 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
CLCN4-201ENST00000380829 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
CLCN4-201ENST00000380829 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
CLCN4-201ENST00000380829 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
CLCN4-201ENST00000380829 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
CLCN4-201ENST00000380829 UBE2AP49459 152 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 HCG22E2RYF7 251 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 Q8NBF4 154 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 LINC00476Q8WZB0 136 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
CLCN4-201ENST00000380829 A0A0G2JQZ4 141 aa8.8□□□□□ -1
CLCN4-201ENST00000380829 PRR15LQ9BU68 103 aa8.79□□□□□ -1
CLCN4-201ENST00000380829 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
CLCN4-201ENST00000380829 KTN1-AS1Q86SY8 53 aa8.79□□□□□ -1
CLCN4-201ENST00000380829 H0Y9J4 135 aa8.78□□□□□ -1
CLCN4-201ENST00000380829 LINC00208Q96KT6 92 aa8.78□□□□□ -1
CLCN4-201ENST00000380829 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
CLCN4-201ENST00000380829 HYDINQ4G0P3 5121 aa8.76□□□□□ -1.01
CLCN4-201ENST00000380829 DNAH6Q9C0G6 4158 aa8.76□□□□□ -1.01
CLCN4-201ENST00000380829 NDUFB1O75438 58 aa8.75□□□□□ -1.01
CLCN4-201ENST00000380829 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
CLCN4-201ENST00000380829 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
CLCN4-201ENST00000380829 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
CLCN4-201ENST00000380829 LCA10Q71F78 164 aa8.74□□□□□ -1.01
CLCN4-201ENST00000380829 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
CLCN4-201ENST00000380829 FRAS1Q86XX4 4008 aa8.74□□□□□ -1.01
CLCN4-201ENST00000380829 MP68P56378 58 aa8.73□□□□□ -1.01
CLCN4-201ENST00000380829 ALMS1Q8TCU4 4167 aa8.72□□□□□ -1.01
CLCN4-201ENST00000380829 A0A1B0GW54 56 aa8.72□□□□□ -1.01
CLCN4-201ENST00000380829 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.01
CLCN4-201ENST00000380829 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.01
CLCN4-201ENST00000380829 A6NED7 52 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 DNAH5Q8TE73 4624 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 DNAH11Q96DT5 4516 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 SPRR1BP22528 89 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
CLCN4-201ENST00000380829 IGLV8-61A0A075B6I0 122 aa8.69□□□□□ -1.02
CLCN4-201ENST00000380829 H0Y9P7 68 aa8.68□□□□□ -1.02
CLCN4-201ENST00000380829 SACSQ9NZJ4 4579 aa8.67□□□□□ -1.02
CLCN4-201ENST00000380829 A6NN06 94 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms