RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
CDKL5-201ENST00000379989 RTL8CO15255 209 aa4.77□□□□□ -1.65
CDKL5-201ENST00000379989 C1orf137Q5JT78 98 aa4.77□□□□□ -1.65
CDKL5-201ENST00000379989 NF1P21359 2839 aa4.77□□□□□ -1.65
CDKL5-201ENST00000379989 REG3AQ06141 175 aa4.77□□□□□ -1.65
CDKL5-201ENST00000379989 TNP2Q05952 138 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 ZNF706Q9Y5V0 76 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-201ENST00000379989 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 A0A096LPF7 62 aa4.76□□□□□ -1.65
CDKL5-201ENST00000379989 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
CDKL5-201ENST00000379989 C6orf48Q9UBA6 75 aa4.75□□□□□ -1.65
CDKL5-201ENST00000379989 H0Y9J4 135 aa4.74□□□□□ -1.65
CDKL5-201ENST00000379989 LINC01556Q5JQF7 62 aa4.74□□□□□ -1.65
CDKL5-201ENST00000379989 TLN2Q9Y4G6 2542 aa4.74□□□□□ -1.65
CDKL5-201ENST00000379989 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
CDKL5-201ENST00000379989 CCDC168Q8NDH2 2452 aa4.74□□□□□ -1.65
CDKL5-201ENST00000379989 HECTD1Q9ULT8 2610 aa4.74□□□□□ -1.65
CDKL5-201ENST00000379989 ANGP03950 147 aaKnown RBP4.74□□□□□ -1.65
CDKL5-201ENST00000379989 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
CDKL5-201ENST00000379989 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
CDKL5-201ENST00000379989 Q6ZR54 194 aa4.73□□□□□ -1.65
CDKL5-201ENST00000379989 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
CDKL5-201ENST00000379989 NSD1Q96L73 2696 aaPredicted RBP4.72□□□□□ -1.65
CDKL5-201ENST00000379989 FBN1P35555 2871 aaKnown RBP4.72□□□□□ -1.65
CDKL5-201ENST00000379989 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
CDKL5-201ENST00000379989 A0A087X002 238 aa4.72□□□□□ -1.65
CDKL5-201ENST00000379989 SONP18583 2426 aaKnown RBP4.72□□□□□ -1.65
CDKL5-201ENST00000379989 DNAH10OSP0CZ25 163 aa4.71□□□□□ -1.65
CDKL5-201ENST00000379989 FASNP49327 2511 aaKnown RBP4.71□□□□□ -1.66
CDKL5-201ENST00000379989 RPL37AP61513 92 aaKnown RBP4.71□□□□□ -1.66
CDKL5-201ENST00000379989 PCOTHQ58A44 107 aa4.7□□□□□ -1.66
CDKL5-201ENST00000379989 HRES1P13985 223 aa4.7□□□□□ -1.66
CDKL5-201ENST00000379989 JMJD1CQ15652 2540 aa4.7□□□□□ -1.66
CDKL5-201ENST00000379989 DEFB131BA0A096LNP1 70 aa4.69□□□□□ -1.66
CDKL5-201ENST00000379989 OXLD1Q5BKU9 147 aa4.69□□□□□ -1.66
CDKL5-201ENST00000379989 FN1P02751 2386 aaKnown RBP4.69□□□□□ -1.66
CDKL5-201ENST00000379989 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
CDKL5-201ENST00000379989 C1orf134Q5TEV5 83 aa4.69□□□□□ -1.66
CDKL5-201ENST00000379989 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
CDKL5-201ENST00000379989 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
CDKL5-201ENST00000379989 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
CDKL5-201ENST00000379989 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
CDKL5-201ENST00000379989 ACANP16112 2415 aa4.68□□□□□ -1.66
CDKL5-201ENST00000379989 NOTCH2Q04721 2471 aa4.67□□□□□ -1.66
CDKL5-201ENST00000379989 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
CDKL5-201ENST00000379989 HTN3P15516 51 aa4.66□□□□□ -1.66
CDKL5-201ENST00000379989 KRTAP26-1Q6PEX3 210 aa4.66□□□□□ -1.66
CDKL5-201ENST00000379989 DEFB4AO15263 64 aa4.65□□□□□ -1.66
CDKL5-201ENST00000379989 Q6ZRX8 168 aa4.65□□□□□ -1.67
CDKL5-201ENST00000379989 DHRS4-AS1Q9P1J3 65 aa4.65□□□□□ -1.67
CDKL5-201ENST00000379989 MTORP42345 2549 aa4.65□□□□□ -1.67
CDKL5-201ENST00000379989 DNAH1Q9P2D7 4330 aa4.64□□□□□ -1.67
CDKL5-201ENST00000379989 C14orf177Q52M58 125 aa4.64□□□□□ -1.67
CDKL5-201ENST00000379989 A0A087WSZ3 146 aa4.64□□□□□ -1.67
CDKL5-201ENST00000379989 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
CDKL5-201ENST00000379989 CAMK2N2Q96S95 79 aa4.63□□□□□ -1.67
CDKL5-201ENST00000379989 ROMO1P60602 79 aa4.63□□□□□ -1.67
CDKL5-201ENST00000379989 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
CDKL5-201ENST00000379989 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
CDKL5-201ENST00000379989 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
CDKL5-201ENST00000379989 K7EIL1 84 aa4.62□□□□□ -1.67
CDKL5-201ENST00000379989 NBEAL2Q6ZNJ1 2754 aa4.62□□□□□ -1.67
CDKL5-201ENST00000379989 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
CDKL5-201ENST00000379989 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
CDKL5-201ENST00000379989 DNAH7Q8WXX0 4024 aa4.61□□□□□ -1.67
CDKL5-201ENST00000379989 NUPR2A6NF83 97 aa4.6□□□□□ -1.67
CDKL5-201ENST00000379989 C15orf56Q8N910 161 aa4.6□□□□□ -1.67
CDKL5-201ENST00000379989 MAST4O15021 2626 aa4.6□□□□□ -1.67
CDKL5-201ENST00000379989 IGKV2-24A0A0C4DH68 120 aa4.6□□□□□ -1.67
CDKL5-201ENST00000379989 A8MWP4 228 aa4.6□□□□□ -1.67
CDKL5-201ENST00000379989 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
CDKL5-201ENST00000379989 TENM1Q9UKZ4 2725 aa4.59□□□□□ -1.67
CDKL5-201ENST00000379989 RPL37AP8A6NKH3 93 aa4.59□□□□□ -1.67
CDKL5-201ENST00000379989 REG3GQ6UW15 175 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 F8P00451 2351 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 TENM2Q9NT68 2774 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 SPRR1AP35321 89 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
CDKL5-201ENST00000379989 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
CDKL5-201ENST00000379989 ZNF861PO60384 105 aa4.57□□□□□ -1.68
CDKL5-201ENST00000379989 LINC00472Q9H8W2 130 aa4.56□□□□□ -1.68
CDKL5-201ENST00000379989 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
CDKL5-201ENST00000379989 A0A1B0GU69 56 aa4.55□□□□□ -1.68
CDKL5-201ENST00000379989 P0C880 135 aa4.55□□□□□ -1.68
CDKL5-201ENST00000379989 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
CDKL5-201ENST00000379989 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
CDKL5-201ENST00000379989 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
CDKL5-201ENST00000379989 IGLV8-61A0A075B6I0 122 aa4.54□□□□□ -1.68
CDKL5-201ENST00000379989 UQCR11O14957 56 aa4.53□□□□□ -1.68
CDKL5-201ENST00000379989 LYSTQ99698 3801 aa4.53□□□□□ -1.68
CDKL5-201ENST00000379989 FLNBO75369 2602 aaKnown RBP4.53□□□□□ -1.68
CDKL5-201ENST00000379989 FAM168BA1KXE4 195 aa4.53□□□□□ -1.68
CDKL5-201ENST00000379989 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
CDKL5-201ENST00000379989 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
CDKL5-201ENST00000379989 ATRQ13535 2644 aa4.52□□□□□ -1.69
CDKL5-201ENST00000379989 VWFP04275 2813 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms