RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 IGFL1Q6UW32 110 aa5.36□□□□□ -1.55
NHLRC3-201ENST00000379599 CCL19Q99731 98 aa5.36□□□□□ -1.55
NHLRC3-201ENST00000379599 MXRA5Q9NR99 2828 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 FLNAP21333 2647 aaKnown RBP5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 HTN3P15516 51 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 ITPR3Q14573 2671 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 DEFB4AO15263 64 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
NHLRC3-201ENST00000379599 GCN1Q92616 2671 aaKnown RBP5.34□□□□□ -1.56
NHLRC3-201ENST00000379599 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 A0A1B0GU69 56 aa5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 A8MWP4 228 aa5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 SETXQ7Z333 2677 aaKnown RBP5.33□□□□□ -1.56
NHLRC3-201ENST00000379599 ROMO1P60602 79 aa5.32□□□□□ -1.56
NHLRC3-201ENST00000379599 TENM4Q6N022 2769 aa5.32□□□□□ -1.56
NHLRC3-201ENST00000379599 HIVEP2P31629 2446 aa5.31□□□□□ -1.56
NHLRC3-201ENST00000379599 IGKV2-24A0A0C4DH68 120 aa5.31□□□□□ -1.56
NHLRC3-201ENST00000379599 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
NHLRC3-201ENST00000379599 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
NHLRC3-201ENST00000379599 KRTAP10-9P60411 292 aa5.31□□□□□ -1.56
NHLRC3-201ENST00000379599 NIPBLQ6KC79 2804 aaeCLIP5.3□□□□□ -1.56
NHLRC3-201ENST00000379599 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-201ENST00000379599 ZNF469Q96JG9 3925 aaPredicted RBP5.3□□□□□ -1.56
NHLRC3-201ENST00000379599 A0A087X002 238 aa5.3□□□□□ -1.56
NHLRC3-201ENST00000379599 PRR34Q9NV39 138 aa5.3□□□□□ -1.56
NHLRC3-201ENST00000379599 CMC4P56277 68 aaPredicted RBP5.29□□□□□ -1.56
NHLRC3-201ENST00000379599 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
NHLRC3-201ENST00000379599 MMP24-AS1A0A0U1RRL7 71 aa5.28□□□□□ -1.56
NHLRC3-201ENST00000379599 UQCR11O14957 56 aa5.28□□□□□ -1.56
NHLRC3-201ENST00000379599 LELP1Q5T871 98 aa5.28□□□□□ -1.56
NHLRC3-201ENST00000379599 UBR5O95071 2799 aaPredicted RBP5.28□□□□□ -1.56
NHLRC3-201ENST00000379599 A0A096LNI7 61 aa5.28□□□□□ -1.56
NHLRC3-201ENST00000379599 DEFB131BA0A096LNP1 70 aa5.27□□□□□ -1.57
NHLRC3-201ENST00000379599 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
NHLRC3-201ENST00000379599 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
NHLRC3-201ENST00000379599 C15orf56Q8N910 161 aa5.26□□□□□ -1.57
NHLRC3-201ENST00000379599 UNC79Q9P2D8 2635 aa5.25□□□□□ -1.57
NHLRC3-201ENST00000379599 ACYP2P14621 99 aa5.25□□□□□ -1.57
NHLRC3-201ENST00000379599 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
NHLRC3-201ENST00000379599 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
NHLRC3-201ENST00000379599 Q6YL49 198 aa5.24□□□□□ -1.57
NHLRC3-201ENST00000379599 LINC00472Q9H8W2 130 aa5.24□□□□□ -1.57
NHLRC3-201ENST00000379599 C19orf73Q9NVV2 129 aa5.24□□□□□ -1.57
NHLRC3-201ENST00000379599 ZNF861PO60384 105 aa5.23□□□□□ -1.57
NHLRC3-201ENST00000379599 PRLHP81277 87 aa5.23□□□□□ -1.57
NHLRC3-201ENST00000379599 SPRR1AP35321 89 aa5.22□□□□□ -1.57
NHLRC3-201ENST00000379599 X6R8D5 127 aa5.22□□□□□ -1.57
NHLRC3-201ENST00000379599 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
NHLRC3-201ENST00000379599 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
NHLRC3-201ENST00000379599 DEFB135Q30KP9 77 aa5.2□□□□□ -1.58
NHLRC3-201ENST00000379599 K7EIL1 84 aa5.19□□□□□ -1.58
NHLRC3-201ENST00000379599 P0C880 135 aa5.18□□□□□ -1.58
NHLRC3-201ENST00000379599 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
NHLRC3-201ENST00000379599 ATRQ13535 2644 aa5.18□□□□□ -1.58
NHLRC3-201ENST00000379599 KRTAP26-1Q6PEX3 210 aa5.17□□□□□ -1.58
NHLRC3-201ENST00000379599 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
NHLRC3-201ENST00000379599 AKAP9Q99996 3911 aa5.16□□□□□ -1.58
NHLRC3-201ENST00000379599 BAHCC1Q9P281 2608 aa5.16□□□□□ -1.58
NHLRC3-201ENST00000379599 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
NHLRC3-201ENST00000379599 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
NHLRC3-201ENST00000379599 DNAH10OSP0CZ25 163 aa5.15□□□□□ -1.58
NHLRC3-201ENST00000379599 SMR3AQ99954 134 aa5.15□□□□□ -1.58
NHLRC3-201ENST00000379599 DEFB113Q30KQ7 82 aa5.15□□□□□ -1.59
NHLRC3-201ENST00000379599 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
NHLRC3-201ENST00000379599 PLA2G2DQ9UNK4 145 aa5.14□□□□□ -1.59
NHLRC3-201ENST00000379599 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
NHLRC3-201ENST00000379599 A8MUU9 505 aa5.14□□□□□ -1.59
NHLRC3-201ENST00000379599 SPART-AS1P0CW21 52 aa5.13□□□□□ -1.59
NHLRC3-201ENST00000379599 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
NHLRC3-201ENST00000379599 IGLV5-52A0A0A0MRZ9 124 aa5.12□□□□□ -1.59
NHLRC3-201ENST00000379599 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
NHLRC3-201ENST00000379599 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
NHLRC3-201ENST00000379599 J3QKU1 62 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 Q5W150 140 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 HIVEP1P15822 2718 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 VWFP04275 2813 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 PDZD2O15018 2839 aa5.1□□□□□ -1.59
NHLRC3-201ENST00000379599 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
NHLRC3-201ENST00000379599 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 TENM1Q9UKZ4 2725 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 MAST4O15021 2626 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 IGLV7-43P04211 117 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
NHLRC3-201ENST00000379599 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
NHLRC3-201ENST00000379599 IGLV9-49A0A0B4J1Y8 123 aa5.07□□□□□ -1.6
NHLRC3-201ENST00000379599 KRTAP16-1A8MUX0 517 aa5.07□□□□□ -1.6
NHLRC3-201ENST00000379599 KMT2BQ9UMN6 2715 aaPredicted RBP5.07□□□□□ -1.6
NHLRC3-201ENST00000379599 LINC00304Q8N9R0 145 aa5.06□□□□□ -1.6
NHLRC3-201ENST00000379599 STAB1Q9NY15 2570 aa5.06□□□□□ -1.6
NHLRC3-201ENST00000379599 Q96NJ1 140 aa5.05□□□□□ -1.6
NHLRC3-201ENST00000379599 CASC10Q5T4H9 136 aa5.05□□□□□ -1.6
NHLRC3-201ENST00000379599 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
NHLRC3-201ENST00000379599 NSD1Q96L73 2696 aaPredicted RBP5.04□□□□□ -1.6
NHLRC3-201ENST00000379599 SPINK1P00995 79 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms