RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
USP6NL-202ENST00000379237 LCE6AA0A183 80 aa7.08□□□□□ -1.28
USP6NL-202ENST00000379237 ZNF469Q96JG9 3925 aaPredicted RBP7.08□□□□□ -1.28
USP6NL-202ENST00000379237 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
USP6NL-202ENST00000379237 PRR34Q9NV39 138 aa7.08□□□□□ -1.28
USP6NL-202ENST00000379237 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
USP6NL-202ENST00000379237 FLNAP21333 2647 aaKnown RBP7.07□□□□□ -1.28
USP6NL-202ENST00000379237 LY6G6CO95867 125 aa7.07□□□□□ -1.28
USP6NL-202ENST00000379237 SETXQ7Z333 2677 aaKnown RBP7.07□□□□□ -1.28
USP6NL-202ENST00000379237 A0A1B0GU69 56 aa7.06□□□□□ -1.28
USP6NL-202ENST00000379237 TEP1Q99973 2627 aaKnown RBP7.06□□□□□ -1.28
USP6NL-202ENST00000379237 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
USP6NL-202ENST00000379237 A8MWP4 228 aa7.06□□□□□ -1.28
USP6NL-202ENST00000379237 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
USP6NL-202ENST00000379237 UNC79Q9P2D8 2635 aa7.05□□□□□ -1.28
USP6NL-202ENST00000379237 ITPR3Q14573 2671 aa7.05□□□□□ -1.28
USP6NL-202ENST00000379237 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
USP6NL-202ENST00000379237 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
USP6NL-202ENST00000379237 HRNRQ86YZ3 2850 aaPredicted RBP7.04□□□□□ -1.28
USP6NL-202ENST00000379237 TP53AIP1Q9HCN2 124 aa7.03□□□□□ -1.28
USP6NL-202ENST00000379237 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
USP6NL-202ENST00000379237 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
USP6NL-202ENST00000379237 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
USP6NL-202ENST00000379237 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.28
USP6NL-202ENST00000379237 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
USP6NL-202ENST00000379237 APCP25054 2843 aa7□□□□□ -1.29
USP6NL-202ENST00000379237 Q8NAQ8 132 aa6.99□□□□□ -1.29
USP6NL-202ENST00000379237 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
USP6NL-202ENST00000379237 ACYP2P14621 99 aa6.99□□□□□ -1.29
USP6NL-202ENST00000379237 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
USP6NL-202ENST00000379237 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
USP6NL-202ENST00000379237 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
USP6NL-202ENST00000379237 NUPR2A6NF83 97 aa6.95□□□□□ -1.3
USP6NL-202ENST00000379237 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
USP6NL-202ENST00000379237 TNP2Q05952 138 aa6.94□□□□□ -1.3
USP6NL-202ENST00000379237 HRES1P13985 223 aa6.94□□□□□ -1.3
USP6NL-202ENST00000379237 UQCR11O14957 56 aa6.94□□□□□ -1.3
USP6NL-202ENST00000379237 STAB1Q9NY15 2570 aa6.94□□□□□ -1.3
USP6NL-202ENST00000379237 C9orf163Q8N9P6 203 aa6.93□□□□□ -1.3
USP6NL-202ENST00000379237 TEX15Q9BXT5 2789 aa6.93□□□□□ -1.3
USP6NL-202ENST00000379237 ZANQ9Y493 2812 aa6.93□□□□□ -1.3
USP6NL-202ENST00000379237 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
USP6NL-202ENST00000379237 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
USP6NL-202ENST00000379237 LINC01556Q5JQF7 62 aa6.9□□□□□ -1.31
USP6NL-202ENST00000379237 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
USP6NL-202ENST00000379237 FBN2P35556 2912 aa6.89□□□□□ -1.31
USP6NL-202ENST00000379237 SPINK1P00995 79 aa6.88□□□□□ -1.31
USP6NL-202ENST00000379237 BAHCC1Q9P281 2608 aa6.88□□□□□ -1.31
USP6NL-202ENST00000379237 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
USP6NL-202ENST00000379237 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
USP6NL-202ENST00000379237 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
USP6NL-202ENST00000379237 C1orf134Q5TEV5 83 aa6.86□□□□□ -1.31
USP6NL-202ENST00000379237 SPRR1AP35321 89 aa6.85□□□□□ -1.31
USP6NL-202ENST00000379237 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
USP6NL-202ENST00000379237 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
USP6NL-202ENST00000379237 IGLV5-37A0A075B6J1 123 aa6.84□□□□□ -1.32
USP6NL-202ENST00000379237 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.32
USP6NL-202ENST00000379237 TLX1NBP0CAT3 122 aa6.83□□□□□ -1.32
USP6NL-202ENST00000379237 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
USP6NL-202ENST00000379237 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
USP6NL-202ENST00000379237 NF1P21359 2839 aa6.81□□□□□ -1.32
USP6NL-202ENST00000379237 CASC10Q5T4H9 136 aa6.81□□□□□ -1.32
USP6NL-202ENST00000379237 IGLV5-52A0A0A0MRZ9 124 aa6.81□□□□□ -1.32
USP6NL-202ENST00000379237 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
USP6NL-202ENST00000379237 KRTAP4-16G5E9R7 235 aaPredicted RBP6.8□□□□□ -1.32
USP6NL-202ENST00000379237 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
USP6NL-202ENST00000379237 H3BNG1 76 aa6.78□□□□□ -1.32
USP6NL-202ENST00000379237 NBEAL1Q6ZS30 2694 aa6.78□□□□□ -1.32
USP6NL-202ENST00000379237 FLNCQ14315 2725 aa6.78□□□□□ -1.32
USP6NL-202ENST00000379237 IGKV2D-30A0A075B6S6 120 aa6.77□□□□□ -1.33
USP6NL-202ENST00000379237 IGKV2-30P06310 120 aa6.77□□□□□ -1.33
USP6NL-202ENST00000379237 KRTAP26-1Q6PEX3 210 aa6.77□□□□□ -1.33
USP6NL-202ENST00000379237 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
USP6NL-202ENST00000379237 KRTAP24-1Q3LI83 254 aa6.77□□□□□ -1.33
USP6NL-202ENST00000379237 UBR5O95071 2799 aaPredicted RBP6.76□□□□□ -1.33
USP6NL-202ENST00000379237 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
USP6NL-202ENST00000379237 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
USP6NL-202ENST00000379237 K7EIL1 84 aa6.72□□□□□ -1.33
USP6NL-202ENST00000379237 SSBP3-AS1Q7Z2R9 100 aa6.71□□□□□ -1.33
USP6NL-202ENST00000379237 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.33
USP6NL-202ENST00000379237 Q6ZR54 194 aa6.7□□□□□ -1.34
USP6NL-202ENST00000379237 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
USP6NL-202ENST00000379237 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
USP6NL-202ENST00000379237 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
USP6NL-202ENST00000379237 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
USP6NL-202ENST00000379237 RTL8CO15255 209 aa6.69□□□□□ -1.34
USP6NL-202ENST00000379237 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
USP6NL-202ENST00000379237 J3QL48 77 aa6.67□□□□□ -1.34
USP6NL-202ENST00000379237 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
USP6NL-202ENST00000379237 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.34
USP6NL-202ENST00000379237 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
USP6NL-202ENST00000379237 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.35
USP6NL-202ENST00000379237 TENM4Q6N022 2769 aa6.64□□□□□ -1.35
USP6NL-202ENST00000379237 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
USP6NL-202ENST00000379237 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
USP6NL-202ENST00000379237 SPACA4Q8TDM5 124 aa6.62□□□□□ -1.35
USP6NL-202ENST00000379237 HIVEP1P15822 2718 aa6.61□□□□□ -1.35
USP6NL-202ENST00000379237 SPRR1BP22528 89 aa6.6□□□□□ -1.35
USP6NL-202ENST00000379237 A0A087X002 238 aa6.6□□□□□ -1.35
USP6NL-202ENST00000379237 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms