RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 LIMD2Q9BT23 127 aa11.51□□□□□ -0.57
TUBGCP3-202ENST00000375669 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
TUBGCP3-202ENST00000375669 LINC00208Q96KT6 92 aa11.49□□□□□ -0.57
TUBGCP3-202ENST00000375669 WFDC13Q8IUB5 93 aa11.48□□□□□ -0.57
TUBGCP3-202ENST00000375669 PRR15LQ9BU68 103 aa11.47□□□□□ -0.57
TUBGCP3-202ENST00000375669 KRTAP4-16G5E9R7 235 aaPredicted RBP11.47□□□□□ -0.57
TUBGCP3-202ENST00000375669 KRTAP7-1Q8IUC3 87 aa11.47□□□□□ -0.57
TUBGCP3-202ENST00000375669 SPANXA2-OT1Q8N9U9 137 aa11.46□□□□□ -0.57
TUBGCP3-202ENST00000375669 SPTSSBQ8NFR3 76 aa11.44□□□□□ -0.58
TUBGCP3-202ENST00000375669 RBM12B-AS1Q9P1G2 102 aa11.44□□□□□ -0.58
TUBGCP3-202ENST00000375669 COL7A1Q02388 2944 aa11.44□□□□□ -0.58
TUBGCP3-202ENST00000375669 KRTAP10-11P60412 298 aa11.44□□□□□ -0.58
TUBGCP3-202ENST00000375669 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
TUBGCP3-202ENST00000375669 IGLV1-50A0A075B6I6 118 aa11.42□□□□□ -0.58
TUBGCP3-202ENST00000375669 ATP11AUNQ6ZP68 121 aa11.42□□□□□ -0.58
TUBGCP3-202ENST00000375669 SPRR1AP35321 89 aa11.41□□□□□ -0.58
TUBGCP3-202ENST00000375669 LCA10Q71F78 164 aa11.41□□□□□ -0.58
TUBGCP3-202ENST00000375669 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
TUBGCP3-202ENST00000375669 NBEAL1Q6ZS30 2694 aa11.41□□□□□ -0.58
TUBGCP3-202ENST00000375669 LINC00476Q8WZB0 136 aa11.4□□□□□ -0.58
TUBGCP3-202ENST00000375669 DNAH10Q8IVF4 4471 aa11.4□□□□□ -0.59
TUBGCP3-202ENST00000375669 H0Y9P7 68 aa11.39□□□□□ -0.59
TUBGCP3-202ENST00000375669 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
TUBGCP3-202ENST00000375669 Q75L30 129 aa11.38□□□□□ -0.59
TUBGCP3-202ENST00000375669 H3BPC8 53 aa11.38□□□□□ -0.59
TUBGCP3-202ENST00000375669 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
TUBGCP3-202ENST00000375669 PLA2G2DQ9UNK4 145 aa11.37□□□□□ -0.59
TUBGCP3-202ENST00000375669 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
TUBGCP3-202ENST00000375669 A6NED7 52 aa11.36□□□□□ -0.59
TUBGCP3-202ENST00000375669 NDUFS5O43920 106 aa11.36□□□□□ -0.59
TUBGCP3-202ENST00000375669 PRLHP81277 87 aa11.36□□□□□ -0.59
TUBGCP3-202ENST00000375669 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
TUBGCP3-202ENST00000375669 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
TUBGCP3-202ENST00000375669 A6NN06 94 aa11.34□□□□□ -0.59
TUBGCP3-202ENST00000375669 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
TUBGCP3-202ENST00000375669 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
TUBGCP3-202ENST00000375669 IGLV5-37A0A075B6J1 123 aa11.33□□□□□ -0.6
TUBGCP3-202ENST00000375669 H3BNG1 76 aa11.33□□□□□ -0.6
TUBGCP3-202ENST00000375669 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.6
TUBGCP3-202ENST00000375669 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
TUBGCP3-202ENST00000375669 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
TUBGCP3-202ENST00000375669 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
TUBGCP3-202ENST00000375669 A0A087WSZ3 146 aa11.31□□□□□ -0.6
TUBGCP3-202ENST00000375669 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
TUBGCP3-202ENST00000375669 COA5Q86WW8 74 aa11.3□□□□□ -0.6
TUBGCP3-202ENST00000375669 J3QKU1 62 aa11.29□□□□□ -0.6
TUBGCP3-202ENST00000375669 CDC42SE1Q9NRR8 79 aa11.28□□□□□ -0.6
TUBGCP3-202ENST00000375669 A0A096LNI7 61 aa11.28□□□□□ -0.6
TUBGCP3-202ENST00000375669 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
TUBGCP3-202ENST00000375669 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
TUBGCP3-202ENST00000375669 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
TUBGCP3-202ENST00000375669 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
TUBGCP3-202ENST00000375669 DNAH1Q9P2D7 4330 aa11.23□□□□□ -0.61
TUBGCP3-202ENST00000375669 CMYA5Q8N3K9 4069 aa11.22□□□□□ -0.61
TUBGCP3-202ENST00000375669 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
TUBGCP3-202ENST00000375669 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.61
TUBGCP3-202ENST00000375669 MOBPQ13875 183 aa11.19□□□□□ -0.62
TUBGCP3-202ENST00000375669 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
TUBGCP3-202ENST00000375669 A8MWP4 228 aa11.18□□□□□ -0.62
TUBGCP3-202ENST00000375669 KRTAP11-1Q8IUC1 163 aa11.18□□□□□ -0.62
TUBGCP3-202ENST00000375669 LINC01558Q9Y6Z2 57 aa11.18□□□□□ -0.62
TUBGCP3-202ENST00000375669 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
TUBGCP3-202ENST00000375669 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
TUBGCP3-202ENST00000375669 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
TUBGCP3-202ENST00000375669 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
TUBGCP3-202ENST00000375669 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
TUBGCP3-202ENST00000375669 LINC00472Q9H8W2 130 aa11.13□□□□□ -0.63
TUBGCP3-202ENST00000375669 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
TUBGCP3-202ENST00000375669 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
TUBGCP3-202ENST00000375669 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
TUBGCP3-202ENST00000375669 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
TUBGCP3-202ENST00000375669 SPINK7P58062 85 aa11.09□□□□□ -0.63
TUBGCP3-202ENST00000375669 H0Y9J4 135 aa11.08□□□□□ -0.64
TUBGCP3-202ENST00000375669 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
TUBGCP3-202ENST00000375669 KRTAP24-1Q3LI83 254 aa11.02□□□□□ -0.65
TUBGCP3-202ENST00000375669 HRES1P13985 223 aa11□□□□□ -0.65
TUBGCP3-202ENST00000375669 TP53AIP1Q9HCN2 124 aa11□□□□□ -0.65
TUBGCP3-202ENST00000375669 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
TUBGCP3-202ENST00000375669 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
TUBGCP3-202ENST00000375669 SPRR1BP22528 89 aa10.97□□□□□ -0.65
TUBGCP3-202ENST00000375669 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
TUBGCP3-202ENST00000375669 Q6ZR54 194 aa10.97□□□□□ -0.65
TUBGCP3-202ENST00000375669 IGLV9-49A0A0B4J1Y8 123 aa10.96□□□□□ -0.66
TUBGCP3-202ENST00000375669 PANO1I0J062 215 aa10.95□□□□□ -0.66
TUBGCP3-202ENST00000375669 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
TUBGCP3-202ENST00000375669 LINC00313P59037 77 aa10.93□□□□□ -0.66
TUBGCP3-202ENST00000375669 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
TUBGCP3-202ENST00000375669 PRAC1Q96KF2 57 aa10.89□□□□□ -0.67
TUBGCP3-202ENST00000375669 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
TUBGCP3-202ENST00000375669 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
TUBGCP3-202ENST00000375669 Q96NJ1 140 aa10.87□□□□□ -0.67
TUBGCP3-202ENST00000375669 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
TUBGCP3-202ENST00000375669 K7EIL1 84 aa10.86□□□□□ -0.67
TUBGCP3-202ENST00000375669 PRR26Q8N8Z3 221 aa10.85□□□□□ -0.67
TUBGCP3-202ENST00000375669 IGHV6-1A0A0B4J1U7 121 aa10.84□□□□□ -0.67
TUBGCP3-202ENST00000375669 A0A087X002 238 aa10.8□□□□□ -0.68
TUBGCP3-202ENST00000375669 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
TUBGCP3-202ENST00000375669 ADM2Q7Z4H4 148 aa10.8□□□□□ -0.68
TUBGCP3-202ENST00000375669 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
TUBGCP3-202ENST00000375669 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms