RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 A6NED7 52 aa7.88□□□□□ -1.15
C9orf3-203ENST00000375315 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 C1orf137Q5JT78 98 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 Q8NBF4 154 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 Q9BRP9 147 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 A6NN06 94 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 Q75L30 129 aa7.87□□□□□ -1.15
C9orf3-203ENST00000375315 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
C9orf3-203ENST00000375315 LELP1Q5T871 98 aa7.86□□□□□ -1.15
C9orf3-203ENST00000375315 LCA10Q71F78 164 aa7.86□□□□□ -1.15
C9orf3-203ENST00000375315 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
C9orf3-203ENST00000375315 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
C9orf3-203ENST00000375315 HUWE1Q7Z6Z7 4374 aaKnown RBP7.83□□□□□ -1.16
C9orf3-203ENST00000375315 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
C9orf3-203ENST00000375315 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
C9orf3-203ENST00000375315 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
C9orf3-203ENST00000375315 CDC42SE1Q9NRR8 79 aa7.82□□□□□ -1.16
C9orf3-203ENST00000375315 PRR34Q9NV39 138 aa7.82□□□□□ -1.16
C9orf3-203ENST00000375315 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
C9orf3-203ENST00000375315 IGKV2D-24A0A075B6R9 120 aa7.82□□□□□ -1.16
C9orf3-203ENST00000375315 H3BPC8 53 aa7.81□□□□□ -1.16
C9orf3-203ENST00000375315 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
C9orf3-203ENST00000375315 TNP2Q05952 138 aa7.8□□□□□ -1.16
C9orf3-203ENST00000375315 WFDC13Q8IUB5 93 aa7.8□□□□□ -1.16
C9orf3-203ENST00000375315 NKAPP1Q8N9T2 125 aa7.79□□□□□ -1.16
C9orf3-203ENST00000375315 LYSTQ99698 3801 aa7.79□□□□□ -1.16
C9orf3-203ENST00000375315 H0Y9P7 68 aa7.78□□□□□ -1.16
C9orf3-203ENST00000375315 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
C9orf3-203ENST00000375315 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
C9orf3-203ENST00000375315 CSMD3Q7Z407 3707 aa7.78□□□□□ -1.16
C9orf3-203ENST00000375315 PRKDCP78527 4128 aaKnown RBP7.77□□□□□ -1.17
C9orf3-203ENST00000375315 DEFB116Q30KQ4 102 aa7.77□□□□□ -1.17
C9orf3-203ENST00000375315 COA5Q86WW8 74 aa7.75□□□□□ -1.17
C9orf3-203ENST00000375315 Q6ZRX8 168 aa7.75□□□□□ -1.17
C9orf3-203ENST00000375315 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
C9orf3-203ENST00000375315 MOBPQ13875 183 aa7.74□□□□□ -1.17
C9orf3-203ENST00000375315 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
C9orf3-203ENST00000375315 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
C9orf3-203ENST00000375315 C7orf33Q8WU49 177 aa7.73□□□□□ -1.17
C9orf3-203ENST00000375315 H3BNG1 76 aa7.72□□□□□ -1.17
C9orf3-203ENST00000375315 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
C9orf3-203ENST00000375315 KRTAP29-1A8MX34 341 aaPredicted RBP7.69□□□□□ -1.18
C9orf3-203ENST00000375315 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
C9orf3-203ENST00000375315 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
C9orf3-203ENST00000375315 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
C9orf3-203ENST00000375315 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
C9orf3-203ENST00000375315 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
C9orf3-203ENST00000375315 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
C9orf3-203ENST00000375315 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
C9orf3-203ENST00000375315 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
C9orf3-203ENST00000375315 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
C9orf3-203ENST00000375315 KRTAP4-16G5E9R7 235 aaPredicted RBP7.66□□□□□ -1.18
C9orf3-203ENST00000375315 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
C9orf3-203ENST00000375315 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
C9orf3-203ENST00000375315 A0A087WSZ3 146 aa7.65□□□□□ -1.19
C9orf3-203ENST00000375315 SPRR1AP35321 89 aa7.65□□□□□ -1.19
C9orf3-203ENST00000375315 DNAH10OSP0CZ25 163 aa7.64□□□□□ -1.19
C9orf3-203ENST00000375315 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
C9orf3-203ENST00000375315 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
C9orf3-203ENST00000375315 PLAC8Q9NZF1 115 aa7.64□□□□□ -1.19
C9orf3-203ENST00000375315 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
C9orf3-203ENST00000375315 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
C9orf3-203ENST00000375315 DNAH7Q8WXX0 4024 aa7.63□□□□□ -1.19
C9orf3-203ENST00000375315 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
C9orf3-203ENST00000375315 SPINK7P58062 85 aa7.62□□□□□ -1.19
C9orf3-203ENST00000375315 A0A0G2JQZ4 141 aa7.61□□□□□ -1.19
C9orf3-203ENST00000375315 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
C9orf3-203ENST00000375315 PLECQ15149 4684 aaKnown RBP7.6□□□□□ -1.19
C9orf3-203ENST00000375315 LINC00313P59037 77 aa7.6□□□□□ -1.19
C9orf3-203ENST00000375315 CNBPP62633 177 aaKnown RBP7.6□□□□□ -1.19
C9orf3-203ENST00000375315 NUPR2A6NF83 97 aa7.59□□□□□ -1.19
C9orf3-203ENST00000375315 LY6G6CO95867 125 aa7.59□□□□□ -1.19
C9orf3-203ENST00000375315 STARD9Q9P2P6 4700 aa7.59□□□□□ -1.19
C9orf3-203ENST00000375315 DNAH10Q8IVF4 4471 aa7.59□□□□□ -1.19
C9orf3-203ENST00000375315 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
C9orf3-203ENST00000375315 A8MWP4 228 aa7.58□□□□□ -1.2
C9orf3-203ENST00000375315 H3BS24 57 aa7.58□□□□□ -1.2
C9orf3-203ENST00000375315 PCOTHQ58A44 107 aa7.58□□□□□ -1.2
C9orf3-203ENST00000375315 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
C9orf3-203ENST00000375315 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
C9orf3-203ENST00000375315 IGLV8-61A0A075B6I0 122 aa7.55□□□□□ -1.2
C9orf3-203ENST00000375315 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
C9orf3-203ENST00000375315 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
C9orf3-203ENST00000375315 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
C9orf3-203ENST00000375315 REG3GQ6UW15 175 aa7.53□□□□□ -1.2
C9orf3-203ENST00000375315 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
C9orf3-203ENST00000375315 H0Y9J4 135 aa7.51□□□□□ -1.21
C9orf3-203ENST00000375315 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
C9orf3-203ENST00000375315 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
C9orf3-203ENST00000375315 HRES1P13985 223 aa7.5□□□□□ -1.21
C9orf3-203ENST00000375315 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
C9orf3-203ENST00000375315 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
C9orf3-203ENST00000375315 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
C9orf3-203ENST00000375315 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
C9orf3-203ENST00000375315 KMT2AQ03164 3969 aa7.48□□□□□ -1.21
C9orf3-203ENST00000375315 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
C9orf3-203ENST00000375315 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
C9orf3-203ENST00000375315 KRTAP21-3Q3LHN1 58 aa7.45□□□□□ -1.22
C9orf3-203ENST00000375315 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
C9orf3-203ENST00000375315 PRLHP81277 87 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms