RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 KLK12Q9UKR0 248 aa4.91□□□□□ -1.62
USP48-203ENST00000374732 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
USP48-203ENST00000374732 PANO1I0J062 215 aa4.9□□□□□ -1.62
USP48-203ENST00000374732 PROK1P58294 105 aa4.9□□□□□ -1.63
USP48-203ENST00000374732 WWC2-AS2Q96NR7 200 aa4.9□□□□□ -1.63
USP48-203ENST00000374732 NAV2Q8IVL1 2488 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 MXRA5Q9NR99 2828 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 CREBBPQ92793 2442 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 CSMD2Q7Z408 3487 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 IGKV2-28A0A075B6P5 120 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 IGKV2D-28P01615 120 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 HTN1P15515 57 aa4.89□□□□□ -1.63
USP48-203ENST00000374732 HIVEP1P15822 2718 aa4.88□□□□□ -1.63
USP48-203ENST00000374732 Q5W150 140 aa4.88□□□□□ -1.63
USP48-203ENST00000374732 UQCR11O14957 56 aa4.87□□□□□ -1.63
USP48-203ENST00000374732 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
USP48-203ENST00000374732 ZANQ9Y493 2812 aa4.87□□□□□ -1.63
USP48-203ENST00000374732 C16orf74Q96GX8 76 aa4.86□□□□□ -1.63
USP48-203ENST00000374732 SMR3AQ99954 134 aa4.86□□□□□ -1.63
USP48-203ENST00000374732 ITPR2Q14571 2701 aa4.86□□□□□ -1.63
USP48-203ENST00000374732 GIG44P09565 113 aaPredicted RBP4.86□□□□□ -1.63
USP48-203ENST00000374732 DNHD1Q96M86 4753 aa4.85□□□□□ -1.63
USP48-203ENST00000374732 TRGV1A0A0A0MS02 117 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
USP48-203ENST00000374732 F8P00451 2351 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 POLQO75417 2590 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 MAP1AP78559 2803 aaPredicted RBP4.84□□□□□ -1.63
USP48-203ENST00000374732 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
USP48-203ENST00000374732 NF1P21359 2839 aa4.84□□□□□ -1.64
USP48-203ENST00000374732 COX7BP24311 80 aa4.83□□□□□ -1.64
USP48-203ENST00000374732 A0A087WTM6 91 aa4.83□□□□□ -1.64
USP48-203ENST00000374732 ITPR3Q14573 2671 aa4.83□□□□□ -1.64
USP48-203ENST00000374732 C2CD3Q4AC94 2353 aa4.83□□□□□ -1.64
USP48-203ENST00000374732 CENPEQ02224 2701 aa4.82□□□□□ -1.64
USP48-203ENST00000374732 ZNF469Q96JG9 3925 aaPredicted RBP4.82□□□□□ -1.64
USP48-203ENST00000374732 A0A1B0GU69 56 aa4.82□□□□□ -1.64
USP48-203ENST00000374732 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
USP48-203ENST00000374732 CDKN2A-AS1Q9UH64 79 aa4.8□□□□□ -1.64
USP48-203ENST00000374732 KRTAP10-3P60369 221 aa4.8□□□□□ -1.64
USP48-203ENST00000374732 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
USP48-203ENST00000374732 COX6A2Q02221 97 aa4.78□□□□□ -1.64
USP48-203ENST00000374732 Q8N1X5 172 aa4.78□□□□□ -1.64
USP48-203ENST00000374732 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
USP48-203ENST00000374732 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
USP48-203ENST00000374732 Q6ZQY7 126 aa4.76□□□□□ -1.65
USP48-203ENST00000374732 KRTAP3-3Q9BYR6 98 aa4.76□□□□□ -1.65
USP48-203ENST00000374732 KRTAP3-2Q9BYR7 98 aa4.76□□□□□ -1.65
USP48-203ENST00000374732 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
USP48-203ENST00000374732 A0A1B0GUV1 79 aa4.75□□□□□ -1.65
USP48-203ENST00000374732 LINC00304Q8N9R0 145 aa4.75□□□□□ -1.65
USP48-203ENST00000374732 Q96NJ1 140 aa4.74□□□□□ -1.65
USP48-203ENST00000374732 NBDYA0A0U1RRE5 68 aa4.74□□□□□ -1.65
USP48-203ENST00000374732 PRO0255Q9UI72 69 aa4.74□□□□□ -1.65
USP48-203ENST00000374732 SSBP3-AS1Q7Z2R9 100 aa4.73□□□□□ -1.65
USP48-203ENST00000374732 CUBNO60494 3623 aa4.73□□□□□ -1.65
USP48-203ENST00000374732 FN1P02751 2386 aaKnown RBP4.72□□□□□ -1.65
USP48-203ENST00000374732 HRES1P13985 223 aa4.72□□□□□ -1.65
USP48-203ENST00000374732 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
USP48-203ENST00000374732 SONP18583 2426 aaKnown RBP4.71□□□□□ -1.65
USP48-203ENST00000374732 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
USP48-203ENST00000374732 A0A0J9YWU9 116 aa4.71□□□□□ -1.66
USP48-203ENST00000374732 DEFB130BP0DP73 79 aa4.71□□□□□ -1.66
USP48-203ENST00000374732 DEFB130AP0DP74 79 aa4.71□□□□□ -1.66
USP48-203ENST00000374732 TLN2Q9Y4G6 2542 aa4.71□□□□□ -1.66
USP48-203ENST00000374732 Q8N377 158 aa4.7□□□□□ -1.66
USP48-203ENST00000374732 WNK1Q9H4A3 2382 aa4.7□□□□□ -1.66
USP48-203ENST00000374732 DNAH3Q8TD57 4116 aa4.7□□□□□ -1.66
USP48-203ENST00000374732 CCDC168Q8NDH2 2452 aa4.69□□□□□ -1.66
USP48-203ENST00000374732 HIVEP2P31629 2446 aa4.69□□□□□ -1.66
USP48-203ENST00000374732 DYNC2H1Q8NCM8 4307 aaKnown RBP4.69□□□□□ -1.66
USP48-203ENST00000374732 Q8IZM0 81 aa4.68□□□□□ -1.66
USP48-203ENST00000374732 SPART-AS1P0CW21 52 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 FLG2Q5D862 2391 aaPredicted RBP4.67□□□□□ -1.66
USP48-203ENST00000374732 K7EQZ3 153 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 DEFB135Q30KP9 77 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 ACANP16112 2415 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 COX17Q14061 63 aa4.67□□□□□ -1.66
USP48-203ENST00000374732 A0A1B0GU33 70 aa4.66□□□□□ -1.66
USP48-203ENST00000374732 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
USP48-203ENST00000374732 H3BNG1 76 aa4.66□□□□□ -1.66
USP48-203ENST00000374732 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
USP48-203ENST00000374732 FAM168BA1KXE4 195 aa4.65□□□□□ -1.66
USP48-203ENST00000374732 LELP1Q5T871 98 aa4.65□□□□□ -1.66
USP48-203ENST00000374732 TOMM7Q9P0U1 55 aa4.65□□□□□ -1.67
USP48-203ENST00000374732 IGLV7-43P04211 117 aa4.64□□□□□ -1.67
USP48-203ENST00000374732 DSCR10P59022 87 aa4.64□□□□□ -1.67
USP48-203ENST00000374732 WFDC10BQ8IUB3 73 aa4.63□□□□□ -1.67
USP48-203ENST00000374732 MTORP42345 2549 aa4.62□□□□□ -1.67
USP48-203ENST00000374732 NOTCH3Q9UM47 2321 aa4.62□□□□□ -1.67
USP48-203ENST00000374732 A0A096LPF7 62 aa4.62□□□□□ -1.67
USP48-203ENST00000374732 A0A1W2PNN7 141 aa4.62□□□□□ -1.67
USP48-203ENST00000374732 NIPBLQ6KC79 2804 aaeCLIP4.62□□□□□ -1.673e-6■□□□□ 10.6
USP48-203ENST00000374732 DEFB4AO15263 64 aa4.62□□□□□ -1.67
USP48-203ENST00000374732 ANGP03950 147 aaKnown RBP4.62□□□□□ -1.67
USP48-203ENST00000374732 RPL37AP61513 92 aaKnown RBP4.61□□□□□ -1.67
USP48-203ENST00000374732 ACYP2P14621 99 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms