RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 B9D2Q9BPU9 175 aa11.13□□□□□ -0.63
LDLRAP1-201ENST00000374338 LCA10Q71F78 164 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 DNAH9Q9NYC9 4486 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 NDUFB1O75438 58 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 Q8N377 158 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 IGLV5-48A0A075B6I7 105 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
LDLRAP1-201ENST00000374338 K7EQZ3 153 aa11.11□□□□□ -0.63
LDLRAP1-201ENST00000374338 PRR15LQ9BU68 103 aa11.11□□□□□ -0.63
LDLRAP1-201ENST00000374338 NDUFS5O43920 106 aa11.1□□□□□ -0.63
LDLRAP1-201ENST00000374338 A6NN06 94 aa11.09□□□□□ -0.63
LDLRAP1-201ENST00000374338 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
LDLRAP1-201ENST00000374338 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.63
LDLRAP1-201ENST00000374338 K7EIL1 84 aa11.08□□□□□ -0.64
LDLRAP1-201ENST00000374338 A0A1B0GW54 56 aa11.06□□□□□ -0.64
LDLRAP1-201ENST00000374338 H3BNG1 76 aa11.06□□□□□ -0.64
LDLRAP1-201ENST00000374338 NKAPP1Q8N9T2 125 aa11.06□□□□□ -0.64
LDLRAP1-201ENST00000374338 DNAH1Q9P2D7 4330 aa11.06□□□□□ -0.64
LDLRAP1-201ENST00000374338 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
LDLRAP1-201ENST00000374338 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
LDLRAP1-201ENST00000374338 A6NED7 52 aa11.03□□□□□ -0.64
LDLRAP1-201ENST00000374338 C1orf137Q5JT78 98 aa11.02□□□□□ -0.65
LDLRAP1-201ENST00000374338 Q75L30 129 aa11.02□□□□□ -0.65
LDLRAP1-201ENST00000374338 MP68P56378 58 aa11.02□□□□□ -0.65
LDLRAP1-201ENST00000374338 Q8NBF4 154 aa11.02□□□□□ -0.65
LDLRAP1-201ENST00000374338 KCNQ1DNQ9H478 68 aa11.02□□□□□ -0.65
LDLRAP1-201ENST00000374338 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
LDLRAP1-201ENST00000374338 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
LDLRAP1-201ENST00000374338 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
LDLRAP1-201ENST00000374338 KRTAP7-1Q8IUC3 87 aa10.99□□□□□ -0.65
LDLRAP1-201ENST00000374338 WFDC13Q8IUB5 93 aa10.99□□□□□ -0.65
LDLRAP1-201ENST00000374338 Q9BRP9 147 aa10.99□□□□□ -0.65
LDLRAP1-201ENST00000374338 SPANXA2-OT1Q8N9U9 137 aa10.98□□□□□ -0.65
LDLRAP1-201ENST00000374338 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
LDLRAP1-201ENST00000374338 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
LDLRAP1-201ENST00000374338 TNP2Q05952 138 aa10.98□□□□□ -0.65
LDLRAP1-201ENST00000374338 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
LDLRAP1-201ENST00000374338 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
LDLRAP1-201ENST00000374338 CDC42SE1Q9NRR8 79 aa10.95□□□□□ -0.66
LDLRAP1-201ENST00000374338 PLECQ15149 4684 aaKnown RBP10.95□□□□□ -0.66
LDLRAP1-201ENST00000374338 RPL37AP61513 92 aaKnown RBP10.91□□□□□ -0.66
LDLRAP1-201ENST00000374338 MOBPQ13875 183 aa10.91□□□□□ -0.66
LDLRAP1-201ENST00000374338 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
LDLRAP1-201ENST00000374338 H0Y9P7 68 aa10.89□□□□□ -0.67
LDLRAP1-201ENST00000374338 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
LDLRAP1-201ENST00000374338 Q6ZRX8 168 aa10.89□□□□□ -0.67
LDLRAP1-201ENST00000374338 TGP01266 2768 aa10.89□□□□□ -0.67
LDLRAP1-201ENST00000374338 MDFIQ99750 246 aa10.88□□□□□ -0.67
LDLRAP1-201ENST00000374338 COA5Q86WW8 74 aa10.88□□□□□ -0.67
LDLRAP1-201ENST00000374338 PRLHP81277 87 aa10.87□□□□□ -0.67
LDLRAP1-201ENST00000374338 DHRS4-AS1Q9P1J3 65 aa10.87□□□□□ -0.67
LDLRAP1-201ENST00000374338 IGLV1-50A0A075B6I6 118 aa10.86□□□□□ -0.67
LDLRAP1-201ENST00000374338 UBE2DNLQ8IWF7 75 aa10.86□□□□□ -0.67
LDLRAP1-201ENST00000374338 A0A096LNI7 61 aa10.85□□□□□ -0.67
LDLRAP1-201ENST00000374338 C9orf163Q8N9P6 203 aa10.85□□□□□ -0.67
LDLRAP1-201ENST00000374338 H3BPC8 53 aa10.84□□□□□ -0.67
LDLRAP1-201ENST00000374338 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
LDLRAP1-201ENST00000374338 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
LDLRAP1-201ENST00000374338 PRKDCP78527 4128 aaKnown RBP10.82□□□□□ -0.68
LDLRAP1-201ENST00000374338 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
LDLRAP1-201ENST00000374338 A0A087WSZ3 146 aa10.81□□□□□ -0.68
LDLRAP1-201ENST00000374338 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
LDLRAP1-201ENST00000374338 KRTAP11-1Q8IUC1 163 aa10.8□□□□□ -0.68
LDLRAP1-201ENST00000374338 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
LDLRAP1-201ENST00000374338 KMT2AQ03164 3969 aa10.77□□□□□ -0.69
LDLRAP1-201ENST00000374338 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
LDLRAP1-201ENST00000374338 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
LDLRAP1-201ENST00000374338 PLAC8Q9NZF1 115 aa10.77□□□□□ -0.69
LDLRAP1-201ENST00000374338 IGFL1Q6UW32 110 aa10.77□□□□□ -0.69
LDLRAP1-201ENST00000374338 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
LDLRAP1-201ENST00000374338 SPINK7P58062 85 aa10.76□□□□□ -0.69
LDLRAP1-201ENST00000374338 CASC2Q6XLA1 102 aa10.76□□□□□ -0.69
LDLRAP1-201ENST00000374338 MEGF8Q7Z7M0 2845 aa10.75□□□□□ -0.69
LDLRAP1-201ENST00000374338 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
LDLRAP1-201ENST00000374338 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
LDLRAP1-201ENST00000374338 SPRR1AP35321 89 aa10.73□□□□□ -0.69
LDLRAP1-201ENST00000374338 PANO1I0J062 215 aa10.72□□□□□ -0.69
LDLRAP1-201ENST00000374338 LINC00313P59037 77 aa10.71□□□□□ -0.7
LDLRAP1-201ENST00000374338 CNBPP62633 177 aaKnown RBP10.71□□□□□ -0.7
LDLRAP1-201ENST00000374338 FRAS1Q86XX4 4008 aa10.71□□□□□ -0.7
LDLRAP1-201ENST00000374338 PRAC1Q96KF2 57 aa10.7□□□□□ -0.7
LDLRAP1-201ENST00000374338 APLNQ9ULZ1 77 aa10.7□□□□□ -0.7
LDLRAP1-201ENST00000374338 H3BS24 57 aa10.69□□□□□ -0.7
LDLRAP1-201ENST00000374338 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
LDLRAP1-201ENST00000374338 PCOTHQ58A44 107 aa10.66□□□□□ -0.7
LDLRAP1-201ENST00000374338 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.7
LDLRAP1-201ENST00000374338 DNAH2Q9P225 4427 aa10.61□□□□□ -0.71
LDLRAP1-201ENST00000374338 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
LDLRAP1-201ENST00000374338 A8MWP4 228 aa10.6□□□□□ -0.71
LDLRAP1-201ENST00000374338 LINC01554Q52M75 96 aa10.58□□□□□ -0.72
LDLRAP1-201ENST00000374338 H0Y9J4 135 aa10.58□□□□□ -0.72
LDLRAP1-201ENST00000374338 DYNC2H1Q8NCM8 4307 aaKnown RBP10.58□□□□□ -0.72
LDLRAP1-201ENST00000374338 VPS13DQ5THJ4 4388 aa10.57□□□□□ -0.72
LDLRAP1-201ENST00000374338 HRES1P13985 223 aa10.57□□□□□ -0.72
LDLRAP1-201ENST00000374338 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
LDLRAP1-201ENST00000374338 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
LDLRAP1-201ENST00000374338 HECTD4Q9Y4D8 3996 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms