RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
PRPF4-201ENST00000374198 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
PRPF4-201ENST00000374198 H3BPC8 53 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 WFDC10BQ8IUB3 73 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 H0Y9P7 68 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
PRPF4-201ENST00000374198 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.08
PRPF4-201ENST00000374198 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.08
PRPF4-201ENST00000374198 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.09
PRPF4-201ENST00000374198 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
PRPF4-201ENST00000374198 PKD1L1Q8TDX9 2849 aa8.26□□□□□ -1.09
PRPF4-201ENST00000374198 HTN3P15516 51 aa8.26□□□□□ -1.09
PRPF4-201ENST00000374198 APOC4P55056 127 aa8.26□□□□□ -1.09
PRPF4-201ENST00000374198 KRTAP29-1A8MX34 341 aaPredicted RBP8.25□□□□□ -1.09
PRPF4-201ENST00000374198 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
PRPF4-201ENST00000374198 COA5Q86WW8 74 aa8.25□□□□□ -1.09
PRPF4-201ENST00000374198 VWFP04275 2813 aa8.24□□□□□ -1.09
PRPF4-201ENST00000374198 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
PRPF4-201ENST00000374198 DEFB135Q30KP9 77 aa8.23□□□□□ -1.09
PRPF4-201ENST00000374198 MOBPQ13875 183 aa8.23□□□□□ -1.09
PRPF4-201ENST00000374198 LINC00476Q8WZB0 136 aa8.23□□□□□ -1.09
PRPF4-201ENST00000374198 C11orf45Q8TAV5 145 aa8.22□□□□□ -1.09
PRPF4-201ENST00000374198 SPRR1AP35321 89 aa8.22□□□□□ -1.09
PRPF4-201ENST00000374198 A0A0G2JQZ4 141 aa8.21□□□□□ -1.1
PRPF4-201ENST00000374198 A0A1W2PNN7 141 aa8.21□□□□□ -1.1
PRPF4-201ENST00000374198 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
PRPF4-201ENST00000374198 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
PRPF4-201ENST00000374198 RPL37AP61513 92 aaKnown RBP8.21□□□□□ -1.1
PRPF4-201ENST00000374198 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
PRPF4-201ENST00000374198 NOTCH1P46531 2555 aa8.2□□□□□ -1.1
PRPF4-201ENST00000374198 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
PRPF4-201ENST00000374198 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
PRPF4-201ENST00000374198 IGFL1Q6UW32 110 aa8.19□□□□□ -1.1
PRPF4-201ENST00000374198 SPART-AS1P0CW21 52 aa8.18□□□□□ -1.1
PRPF4-201ENST00000374198 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
PRPF4-201ENST00000374198 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
PRPF4-201ENST00000374198 A0A087WSZ3 146 aa8.17□□□□□ -1.1
PRPF4-201ENST00000374198 Q8NAQ8 132 aa8.17□□□□□ -1.1
PRPF4-201ENST00000374198 PLAC8Q9NZF1 115 aa8.17□□□□□ -1.1
PRPF4-201ENST00000374198 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
PRPF4-201ENST00000374198 FAM168BA1KXE4 195 aa8.16□□□□□ -1.1
PRPF4-201ENST00000374198 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
PRPF4-201ENST00000374198 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
PRPF4-201ENST00000374198 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.11
PRPF4-201ENST00000374198 CMYA5Q8N3K9 4069 aa8.13□□□□□ -1.11
PRPF4-201ENST00000374198 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
PRPF4-201ENST00000374198 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
PRPF4-201ENST00000374198 SPINK7P58062 85 aa8.12□□□□□ -1.11
PRPF4-201ENST00000374198 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
PRPF4-201ENST00000374198 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
PRPF4-201ENST00000374198 IGLV8-61A0A075B6I0 122 aa8.1□□□□□ -1.11
PRPF4-201ENST00000374198 A8MWP4 228 aa8.1□□□□□ -1.11
PRPF4-201ENST00000374198 PCOTHQ58A44 107 aa8.08□□□□□ -1.12
PRPF4-201ENST00000374198 REG3GQ6UW15 175 aa8.07□□□□□ -1.12
PRPF4-201ENST00000374198 K7EIL1 84 aa8.06□□□□□ -1.12
PRPF4-201ENST00000374198 LINC00313P59037 77 aa8.06□□□□□ -1.12
PRPF4-201ENST00000374198 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
PRPF4-201ENST00000374198 MMP24-AS1A0A0U1RRL7 71 aa8.03□□□□□ -1.12
PRPF4-201ENST00000374198 H3BNG1 76 aa8.03□□□□□ -1.12
PRPF4-201ENST00000374198 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
PRPF4-201ENST00000374198 HRES1P13985 223 aa8.02□□□□□ -1.13
PRPF4-201ENST00000374198 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
PRPF4-201ENST00000374198 H0Y9J4 135 aa8□□□□□ -1.13
PRPF4-201ENST00000374198 PRLHP81277 87 aa7.99□□□□□ -1.13
PRPF4-201ENST00000374198 TGP01266 2768 aa7.99□□□□□ -1.13
PRPF4-201ENST00000374198 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
PRPF4-201ENST00000374198 IGKV2-24A0A0C4DH68 120 aa7.96□□□□□ -1.13
PRPF4-201ENST00000374198 LINC01554Q52M75 96 aa7.96□□□□□ -1.13
PRPF4-201ENST00000374198 Q6ZR54 194 aa7.96□□□□□ -1.13
PRPF4-201ENST00000374198 PRKDCP78527 4128 aaKnown RBP7.96□□□□□ -1.13
PRPF4-201ENST00000374198 H3BS24 57 aa7.96□□□□□ -1.14
PRPF4-201ENST00000374198 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
PRPF4-201ENST00000374198 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
PRPF4-201ENST00000374198 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
PRPF4-201ENST00000374198 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
PRPF4-201ENST00000374198 CASC10Q5T4H9 136 aa7.93□□□□□ -1.14
PRPF4-201ENST00000374198 DEFB131BA0A096LNP1 70 aa7.91□□□□□ -1.14
PRPF4-201ENST00000374198 DNAH10OSP0CZ25 163 aa7.9□□□□□ -1.14
PRPF4-201ENST00000374198 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.14
PRPF4-201ENST00000374198 SPRR1BP22528 89 aa7.9□□□□□ -1.15
PRPF4-201ENST00000374198 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
PRPF4-201ENST00000374198 A0A096LNI7 61 aa7.86□□□□□ -1.15
PRPF4-201ENST00000374198 RTL8CO15255 209 aa7.85□□□□□ -1.15
PRPF4-201ENST00000374198 Q96NJ1 140 aa7.85□□□□□ -1.15
PRPF4-201ENST00000374198 A0A087X002 238 aa7.84□□□□□ -1.15
PRPF4-201ENST00000374198 WWC2-AS2Q96NR7 200 aa7.83□□□□□ -1.16
PRPF4-201ENST00000374198 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
PRPF4-201ENST00000374198 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
PRPF4-201ENST00000374198 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
PRPF4-201ENST00000374198 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
PRPF4-201ENST00000374198 IGHV6-1A0A0B4J1U7 121 aa7.79□□□□□ -1.16
PRPF4-201ENST00000374198 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
PRPF4-201ENST00000374198 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
PRPF4-201ENST00000374198 ACYP2P14621 99 aa7.78□□□□□ -1.16
PRPF4-201ENST00000374198 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
PRPF4-201ENST00000374198 STAB2Q8WWQ8 2551 aa7.78□□□□□ -1.16
PRPF4-201ENST00000374198 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
PRPF4-201ENST00000374198 A0A1B0GU69 56 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms