RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
TRAPPC3-201ENST00000373159 CLEC2BQ92478 149 aa6.73□□□□□ -1.33
TRAPPC3-201ENST00000373159 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC3-201ENST00000373159 VAMP3Q15836 100 aa6.72□□□□□ -1.33
TRAPPC3-201ENST00000373159 C20orf202A1L168 122 aa6.71□□□□□ -1.34
TRAPPC3-201ENST00000373159 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
TRAPPC3-201ENST00000373159 OCIAD2Q56VL3 154 aa6.71□□□□□ -1.34
TRAPPC3-201ENST00000373159 IGFL1Q6UW32 110 aa6.71□□□□□ -1.34
TRAPPC3-201ENST00000373159 LINC00575Q6W349 94 aa6.71□□□□□ -1.34
TRAPPC3-201ENST00000373159 Q6ZQY7 126 aa6.7□□□□□ -1.34
TRAPPC3-201ENST00000373159 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
TRAPPC3-201ENST00000373159 SLC7A5P1Q8MH63 180 aa6.69□□□□□ -1.34
TRAPPC3-201ENST00000373159 KRTDAPP60985 99 aa6.68□□□□□ -1.34
TRAPPC3-201ENST00000373159 Q96NJ1 140 aa6.68□□□□□ -1.34
TRAPPC3-201ENST00000373159 LST1O00453 97 aa6.67□□□□□ -1.34
TRAPPC3-201ENST00000373159 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
TRAPPC3-201ENST00000373159 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.34
TRAPPC3-201ENST00000373159 TRBV20-1A0A075B6N2 111 aa6.64□□□□□ -1.35
TRAPPC3-201ENST00000373159 A8MUU9 505 aa6.64□□□□□ -1.35
TRAPPC3-201ENST00000373159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC3-201ENST00000373159 PPDPFLQ8WWR9 84 aa6.64□□□□□ -1.35
TRAPPC3-201ENST00000373159 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
TRAPPC3-201ENST00000373159 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
TRAPPC3-201ENST00000373159 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
TRAPPC3-201ENST00000373159 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
TRAPPC3-201ENST00000373159 MT2AP02795 61 aa6.61□□□□□ -1.35
TRAPPC3-201ENST00000373159 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
TRAPPC3-201ENST00000373159 SS18L2Q9UHA2 77 aa6.61□□□□□ -1.35
TRAPPC3-201ENST00000373159 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
TRAPPC3-201ENST00000373159 H3BUT2 72 aa6.59□□□□□ -1.35
TRAPPC3-201ENST00000373159 LCE2BO14633 110 aa6.57□□□□□ -1.36
TRAPPC3-201ENST00000373159 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
TRAPPC3-201ENST00000373159 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
TRAPPC3-201ENST00000373159 TEN1Q86WV5 123 aa6.56□□□□□ -1.36
TRAPPC3-201ENST00000373159 MT1FP04733 61 aa6.55□□□□□ -1.36
TRAPPC3-201ENST00000373159 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
TRAPPC3-201ENST00000373159 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
TRAPPC3-201ENST00000373159 A0A087WSZ3 146 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 DSCR10P59022 87 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 C12orf57Q99622 126 aa6.52□□□□□ -1.37
TRAPPC3-201ENST00000373159 NDUFV3P56181 108 aaKnown RBP6.51□□□□□ -1.37
TRAPPC3-201ENST00000373159 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
TRAPPC3-201ENST00000373159 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
TRAPPC3-201ENST00000373159 SNCGO76070 127 aa6.49□□□□□ -1.37
TRAPPC3-201ENST00000373159 LINC00313P59037 77 aa6.49□□□□□ -1.37
TRAPPC3-201ENST00000373159 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
TRAPPC3-201ENST00000373159 HRES1P13985 223 aa6.48□□□□□ -1.37
TRAPPC3-201ENST00000373159 H0YGX0 51 aa6.47□□□□□ -1.37
TRAPPC3-201ENST00000373159 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
TRAPPC3-201ENST00000373159 H3BMG7 143 aa6.46□□□□□ -1.38
TRAPPC3-201ENST00000373159 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
TRAPPC3-201ENST00000373159 SIGMAR1Q99720 223 aa6.45□□□□□ -1.38
TRAPPC3-201ENST00000373159 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
TRAPPC3-201ENST00000373159 GHRHP01286 108 aa6.44□□□□□ -1.38
TRAPPC3-201ENST00000373159 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
TRAPPC3-201ENST00000373159 HIST1H2BLQ99880 126 aa6.43□□□□□ -1.38
TRAPPC3-201ENST00000373159 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
TRAPPC3-201ENST00000373159 IGKV4-1P06312 121 aa6.42□□□□□ -1.38
TRAPPC3-201ENST00000373159 HIST3H2BBQ8N257 126 aa6.42□□□□□ -1.38
TRAPPC3-201ENST00000373159 A0A1B0GX51 115 aa6.41□□□□□ -1.38
TRAPPC3-201ENST00000373159 FABP2P12104 132 aa6.41□□□□□ -1.38
TRAPPC3-201ENST00000373159 RAB37Q96AX2 223 aa6.41□□□□□ -1.38
TRAPPC3-201ENST00000373159 COX8AP10176 69 aa6.4□□□□□ -1.38
TRAPPC3-201ENST00000373159 S100A2P29034 98 aa6.4□□□□□ -1.38
TRAPPC3-201ENST00000373159 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
TRAPPC3-201ENST00000373159 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
TRAPPC3-201ENST00000373159 DLEU1O43261 78 aa6.39□□□□□ -1.39
TRAPPC3-201ENST00000373159 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
TRAPPC3-201ENST00000373159 MTURNQ8N3F0 131 aa6.38□□□□□ -1.39
TRAPPC3-201ENST00000373159 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
TRAPPC3-201ENST00000373159 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
TRAPPC3-201ENST00000373159 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
TRAPPC3-201ENST00000373159 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
TRAPPC3-201ENST00000373159 HIGD1BQ9P298 99 aa6.34□□□□□ -1.39
TRAPPC3-201ENST00000373159 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
TRAPPC3-201ENST00000373159 H3BQ85 93 aa6.31□□□□□ -1.4
TRAPPC3-201ENST00000373159 C14orf144Q96I85 54 aa6.31□□□□□ -1.4
TRAPPC3-201ENST00000373159 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
TRAPPC3-201ENST00000373159 SPINK7P58062 85 aa6.3□□□□□ -1.4
TRAPPC3-201ENST00000373159 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
TRAPPC3-201ENST00000373159 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 A8MWP4 228 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 TRACP01848 142 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 CCKP06307 115 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
TRAPPC3-201ENST00000373159 TMEM256-PLSCR3K7ERE1 68 aa6.28□□□□□ -1.4
TRAPPC3-201ENST00000373159 TRIAP1O43715 76 aa6.28□□□□□ -1.4
TRAPPC3-201ENST00000373159 S100A6P06703 90 aa6.28□□□□□ -1.4
TRAPPC3-201ENST00000373159 NEBP20929 6669 aa6.27□□□□□ -1.41
TRAPPC3-201ENST00000373159 A0A1B0GV72 72 aa6.27□□□□□ -1.41
TRAPPC3-201ENST00000373159 DNAL4O96015 105 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms