RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CRYGAP11844 174 aa8.9□□□□□ -0.99
LDB3-204ENST00000372066 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.99
LDB3-204ENST00000372066 C9orf163Q8N9P6 203 aa8.9□□□□□ -0.99
LDB3-204ENST00000372066 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.99
LDB3-204ENST00000372066 CXCL6P80162 114 aa8.89□□□□□ -0.99
LDB3-204ENST00000372066 C9orf153Q5TBE3 101 aa8.89□□□□□ -0.99
LDB3-204ENST00000372066 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
LDB3-204ENST00000372066 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
LDB3-204ENST00000372066 FUSP35637 526 aaKnown RBP eCLIP8.87□□□□□ -0.99
LDB3-204ENST00000372066 UBE2BP63146 152 aa8.87□□□□□ -0.99
LDB3-204ENST00000372066 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
LDB3-204ENST00000372066 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
LDB3-204ENST00000372066 BCE1O60756 84 aa8.86□□□□□ -0.99
LDB3-204ENST00000372066 DEFB105AQ8NG35 78 aa8.86□□□□□ -0.99
LDB3-204ENST00000372066 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
LDB3-204ENST00000372066 SERP2Q8N6R1 65 aa8.84□□□□□ -0.99
LDB3-204ENST00000372066 HERC1Q15751 4861 aa8.84□□□□□ -0.99
LDB3-204ENST00000372066 H0Y9J4 135 aa8.83□□□□□ -1
LDB3-204ENST00000372066 HAMPP81172 84 aa8.83□□□□□ -1
LDB3-204ENST00000372066 A0A087WVE0 104 aa8.82□□□□□ -1
LDB3-204ENST00000372066 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
LDB3-204ENST00000372066 FAT1Q14517 4588 aa8.81□□□□□ -1
LDB3-204ENST00000372066 A0A087WTM6 91 aa8.81□□□□□ -1
LDB3-204ENST00000372066 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
LDB3-204ENST00000372066 F8WEM9 126 aa8.8□□□□□ -1
LDB3-204ENST00000372066 ERC2-IT1O76042 136 aa8.8□□□□□ -1
LDB3-204ENST00000372066 KRTAP10-1P60331 282 aa8.8□□□□□ -1
LDB3-204ENST00000372066 C1orf137Q5JT78 98 aa8.8□□□□□ -1
LDB3-204ENST00000372066 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
LDB3-204ENST00000372066 NREPQ16612 68 aa8.78□□□□□ -1
LDB3-204ENST00000372066 Q5VSD8 79 aa8.78□□□□□ -1
LDB3-204ENST00000372066 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
LDB3-204ENST00000372066 Q8NBF4 154 aa8.78□□□□□ -1
LDB3-204ENST00000372066 CHTF8P0CG12 524 aa8.78□□□□□ -1
LDB3-204ENST00000372066 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
LDB3-204ENST00000372066 TMEM258P61165 79 aa8.77□□□□□ -1.01
LDB3-204ENST00000372066 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
LDB3-204ENST00000372066 SPRR4Q96PI1 79 aa8.77□□□□□ -1.01
LDB3-204ENST00000372066 PRLHP81277 87 aa8.76□□□□□ -1.01
LDB3-204ENST00000372066 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
LDB3-204ENST00000372066 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
LDB3-204ENST00000372066 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
LDB3-204ENST00000372066 SPRR1BP22528 89 aa8.74□□□□□ -1.01
LDB3-204ENST00000372066 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
LDB3-204ENST00000372066 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
LDB3-204ENST00000372066 J3KT08 172 aa8.73□□□□□ -1.01
LDB3-204ENST00000372066 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
LDB3-204ENST00000372066 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
LDB3-204ENST00000372066 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
LDB3-204ENST00000372066 BPY2O14599 106 aa8.72□□□□□ -1.01
LDB3-204ENST00000372066 UBE2AP49459 152 aa8.72□□□□□ -1.01
LDB3-204ENST00000372066 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
LDB3-204ENST00000372066 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
LDB3-204ENST00000372066 KRTAP11-1Q8IUC1 163 aa8.69□□□□□ -1.02
LDB3-204ENST00000372066 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
LDB3-204ENST00000372066 SCXQ7RTU7 201 aa8.68□□□□□ -1.02
LDB3-204ENST00000372066 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
LDB3-204ENST00000372066 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
LDB3-204ENST00000372066 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
LDB3-204ENST00000372066 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
LDB3-204ENST00000372066 IGFL1Q6UW32 110 aa8.67□□□□□ -1.02
LDB3-204ENST00000372066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
LDB3-204ENST00000372066 PANO1I0J062 215 aa8.66□□□□□ -1.02
LDB3-204ENST00000372066 J3QL48 77 aa8.65□□□□□ -1.02
LDB3-204ENST00000372066 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
LDB3-204ENST00000372066 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
LDB3-204ENST00000372066 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
LDB3-204ENST00000372066 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
LDB3-204ENST00000372066 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
LDB3-204ENST00000372066 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
LDB3-204ENST00000372066 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
LDB3-204ENST00000372066 KLKP1Q107X0 134 aa8.59□□□□□ -1.03
LDB3-204ENST00000372066 NDUFC1O43677 76 aa8.57□□□□□ -1.04
LDB3-204ENST00000372066 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
LDB3-204ENST00000372066 Q8N9L7 120 aa8.57□□□□□ -1.04
LDB3-204ENST00000372066 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
LDB3-204ENST00000372066 A0A087WSZ3 146 aa8.56□□□□□ -1.04
LDB3-204ENST00000372066 DSCR10P59022 87 aa8.56□□□□□ -1.04
LDB3-204ENST00000372066 KRTAP29-1A8MX34 341 aaPredicted RBP8.55□□□□□ -1.04
LDB3-204ENST00000372066 Q6ZSA8 131 aa8.55□□□□□ -1.04
LDB3-204ENST00000372066 C20orf197Q8N268 126 aa8.55□□□□□ -1.04
LDB3-204ENST00000372066 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
LDB3-204ENST00000372066 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
LDB3-204ENST00000372066 ZNF861PO60384 105 aa8.52□□□□□ -1.04
LDB3-204ENST00000372066 OCR1Q9BZK8 76 aa8.52□□□□□ -1.04
LDB3-204ENST00000372066 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
LDB3-204ENST00000372066 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
LDB3-204ENST00000372066 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
LDB3-204ENST00000372066 K7EQZ3 153 aa8.51□□□□□ -1.05
LDB3-204ENST00000372066 H7BZZ5 65 aa8.5□□□□□ -1.05
LDB3-204ENST00000372066 SERP1Q9Y6X1 66 aa8.49□□□□□ -1.05
LDB3-204ENST00000372066 HCG22E2RYF7 251 aa8.48□□□□□ -1.05
LDB3-204ENST00000372066 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
LDB3-204ENST00000372066 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
LDB3-204ENST00000372066 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
LDB3-204ENST00000372066 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
LDB3-204ENST00000372066 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
LDB3-204ENST00000372066 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
LDB3-204ENST00000372066 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
LDB3-204ENST00000372066 A8MWP4 228 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms