RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
LDB3-203ENST00000372056 TMEM258P61165 79 aa8.06□□□□□ -1.12
LDB3-203ENST00000372056 ATP5EP2Q5VTU8 51 aa8.06□□□□□ -1.12
LDB3-203ENST00000372056 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
LDB3-203ENST00000372056 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
LDB3-203ENST00000372056 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
LDB3-203ENST00000372056 A0A087WVE0 104 aa8.03□□□□□ -1.12
LDB3-203ENST00000372056 BCE1O60756 84 aa8.03□□□□□ -1.12
LDB3-203ENST00000372056 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
LDB3-203ENST00000372056 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.12
LDB3-203ENST00000372056 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
LDB3-203ENST00000372056 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
LDB3-203ENST00000372056 SMIM29Q86T20 159 aa8□□□□□ -1.13
LDB3-203ENST00000372056 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
LDB3-203ENST00000372056 UBE2AP49459 152 aa8□□□□□ -1.13
LDB3-203ENST00000372056 Q6ZVQ6 151 aa7.99□□□□□ -1.13
LDB3-203ENST00000372056 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
LDB3-203ENST00000372056 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
LDB3-203ENST00000372056 SCXQ7RTU7 201 aa7.98□□□□□ -1.13
LDB3-203ENST00000372056 FAM30AQ9NZY2 134 aa7.98□□□□□ -1.13
LDB3-203ENST00000372056 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
LDB3-203ENST00000372056 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.13
LDB3-203ENST00000372056 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
LDB3-203ENST00000372056 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
LDB3-203ENST00000372056 F8WEM9 126 aa7.95□□□□□ -1.14
LDB3-203ENST00000372056 SPRR1BP22528 89 aa7.95□□□□□ -1.14
LDB3-203ENST00000372056 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 OXTP01178 125 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 SACSQ9NZJ4 4579 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 A0A1B0GW54 56 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 ZNF861PO60384 105 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 HAMPP81172 84 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 Q8NBF4 154 aa7.94□□□□□ -1.14
LDB3-203ENST00000372056 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
LDB3-203ENST00000372056 CXCL6P80162 114 aa7.92□□□□□ -1.14
LDB3-203ENST00000372056 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
LDB3-203ENST00000372056 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
LDB3-203ENST00000372056 IGFL1Q6UW32 110 aa7.9□□□□□ -1.14
LDB3-203ENST00000372056 DNAH11Q96DT5 4516 aa7.9□□□□□ -1.14
LDB3-203ENST00000372056 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
LDB3-203ENST00000372056 NREPQ16612 68 aa7.89□□□□□ -1.15
LDB3-203ENST00000372056 A0A0G2JQZ4 141 aa7.87□□□□□ -1.15
LDB3-203ENST00000372056 Q5XG85 94 aa7.87□□□□□ -1.15
LDB3-203ENST00000372056 FAT2Q9NYQ8 4349 aa7.87□□□□□ -1.15
LDB3-203ENST00000372056 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
LDB3-203ENST00000372056 CDK2AP2O75956 126 aa7.86□□□□□ -1.15
LDB3-203ENST00000372056 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
LDB3-203ENST00000372056 PKD1P98161 4303 aa7.86□□□□□ -1.15
LDB3-203ENST00000372056 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
LDB3-203ENST00000372056 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
LDB3-203ENST00000372056 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
LDB3-203ENST00000372056 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
LDB3-203ENST00000372056 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
LDB3-203ENST00000372056 RYR2Q92736 4967 aa7.84□□□□□ -1.15
LDB3-203ENST00000372056 H7BZZ5 65 aa7.83□□□□□ -1.16
LDB3-203ENST00000372056 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
LDB3-203ENST00000372056 BPY2O14599 106 aa7.83□□□□□ -1.16
LDB3-203ENST00000372056 SERP1Q9Y6X1 66 aa7.83□□□□□ -1.16
LDB3-203ENST00000372056 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
LDB3-203ENST00000372056 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
LDB3-203ENST00000372056 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
LDB3-203ENST00000372056 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
LDB3-203ENST00000372056 Q8N9L7 120 aa7.8□□□□□ -1.16
LDB3-203ENST00000372056 KMT2CQ8NEZ4 4911 aaKnown RBP7.8□□□□□ -1.16
LDB3-203ENST00000372056 A0A087WSZ3 146 aa7.79□□□□□ -1.16
LDB3-203ENST00000372056 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
LDB3-203ENST00000372056 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
LDB3-203ENST00000372056 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
LDB3-203ENST00000372056 NDUFC1O43677 76 aa7.77□□□□□ -1.17
LDB3-203ENST00000372056 HRCT1Q6UXD1 115 aa7.77□□□□□ -1.17
LDB3-203ENST00000372056 DSCR10P59022 87 aa7.75□□□□□ -1.17
LDB3-203ENST00000372056 ANAPC11Q9NYG5 84 aa7.75□□□□□ -1.17
LDB3-203ENST00000372056 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
LDB3-203ENST00000372056 SSBP3-AS1Q7Z2R9 100 aa7.73□□□□□ -1.17
LDB3-203ENST00000372056 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
LDB3-203ENST00000372056 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
LDB3-203ENST00000372056 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
LDB3-203ENST00000372056 MOBPQ13875 183 aa7.72□□□□□ -1.17
LDB3-203ENST00000372056 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
LDB3-203ENST00000372056 PKHD1P08F94 4074 aa7.71□□□□□ -1.18
LDB3-203ENST00000372056 K7EQZ3 153 aa7.7□□□□□ -1.18
LDB3-203ENST00000372056 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
LDB3-203ENST00000372056 LINC00472Q9H8W2 130 aa7.69□□□□□ -1.18
LDB3-203ENST00000372056 RYR3Q15413 4870 aa7.69□□□□□ -1.18
LDB3-203ENST00000372056 CD164Q04900 197 aa7.67□□□□□ -1.18
LDB3-203ENST00000372056 FP248Q71RG6 208 aaPredicted RBP7.67□□□□□ -1.18
LDB3-203ENST00000372056 TMEM254Q8TBM7 123 aa7.66□□□□□ -1.18
LDB3-203ENST00000372056 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
LDB3-203ENST00000372056 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
LDB3-203ENST00000372056 A0A0U1RQV1 116 aa7.64□□□□□ -1.19
LDB3-203ENST00000372056 Q5VSD8 79 aa7.64□□□□□ -1.19
LDB3-203ENST00000372056 Q8N1X5 172 aa7.64□□□□□ -1.19
LDB3-203ENST00000372056 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
LDB3-203ENST00000372056 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
LDB3-203ENST00000372056 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
LDB3-203ENST00000372056 A8MWP4 228 aa7.62□□□□□ -1.19
LDB3-203ENST00000372056 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
LDB3-203ENST00000372056 Q96NJ1 140 aa7.62□□□□□ -1.19
LDB3-203ENST00000372056 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms