RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 F8WEM9 126 aa16.03■□□□□ 0.16
ATPAF1-202ENST00000371937 SRRM2Q9UQ35 2752 aaKnown RBP16.02■□□□□ 0.16
ATPAF1-202ENST00000371937 ZNF706Q9Y5V0 76 aaPredicted RBP16.02■□□□□ 0.16
ATPAF1-202ENST00000371937 CDIP1Q9H305 208 aa16.01■□□□□ 0.15
ATPAF1-202ENST00000371937 LRP1BQ9NZR2 4599 aa16■□□□□ 0.15
ATPAF1-202ENST00000371937 SPRR4Q96PI1 79 aa15.98■□□□□ 0.15
ATPAF1-202ENST00000371937 DYNC1H1Q14204 4646 aaKnown RBP15.96■□□□□ 0.15
ATPAF1-202ENST00000371937 XGP55808 180 aa15.93■□□□□ 0.14
ATPAF1-202ENST00000371937 LINC00483Q53H64 154 aa15.93■□□□□ 0.14
ATPAF1-202ENST00000371937 RYR3Q15413 4870 aa15.92■□□□□ 0.14
ATPAF1-202ENST00000371937 IGLV8-61A0A075B6I0 122 aa15.91■□□□□ 0.14
ATPAF1-202ENST00000371937 LINC00846Q9NV44 126 aa15.89■□□□□ 0.13
ATPAF1-202ENST00000371937 Q6JHZ5 121 aa15.84■□□□□ 0.13
ATPAF1-202ENST00000371937 SIGMAR1Q99720 223 aa15.84■□□□□ 0.13
ATPAF1-202ENST00000371937 A0A1B0GW54 56 aa15.82■□□□□ 0.12
ATPAF1-202ENST00000371937 RPL37AP61513 92 aaKnown RBP15.82■□□□□ 0.12
ATPAF1-202ENST00000371937 IGFL1Q6UW32 110 aa15.82■□□□□ 0.12
ATPAF1-202ENST00000371937 LINC00643Q86TS7 51 aa15.81■□□□□ 0.12
ATPAF1-202ENST00000371937 Q8NBF4 154 aa15.81■□□□□ 0.12
ATPAF1-202ENST00000371937 A0A1W2PNM2 257 aa15.8■□□□□ 0.12
ATPAF1-202ENST00000371937 UBL5Q9BZL1 73 aa15.8■□□□□ 0.12
ATPAF1-202ENST00000371937 IGLV9-49A0A0B4J1Y8 123 aa15.77■□□□□ 0.11
ATPAF1-202ENST00000371937 SMR3BP02814 79 aaPredicted RBP15.77■□□□□ 0.11
ATPAF1-202ENST00000371937 APOBP04114 4563 aaKnown RBP15.76■□□□□ 0.11
ATPAF1-202ENST00000371937 MT-ATP8P03928 68 aa15.75■□□□□ 0.11
ATPAF1-202ENST00000371937 C9orf153Q5TBE3 101 aa15.75■□□□□ 0.11
ATPAF1-202ENST00000371937 ANAPC11Q9NYG5 84 aa15.75■□□□□ 0.11
ATPAF1-202ENST00000371937 VPS13BQ7Z7G8 4022 aa15.75■□□□□ 0.11
ATPAF1-202ENST00000371937 CRYGAP11844 174 aa15.73■□□□□ 0.11
ATPAF1-202ENST00000371937 A0A0G2JQZ4 141 aa15.72■□□□□ 0.11
ATPAF1-202ENST00000371937 Q6ZVQ6 151 aa15.69■□□□□ 0.1
ATPAF1-202ENST00000371937 SPINK6Q6UWN8 80 aa15.68■□□□□ 0.1
ATPAF1-202ENST00000371937 MOBPQ13875 183 aa15.68■□□□□ 0.1
ATPAF1-202ENST00000371937 Q6Q795 121 aa15.67■□□□□ 0.1
ATPAF1-202ENST00000371937 NREPQ16612 68 aa15.65■□□□□ 0.1
ATPAF1-202ENST00000371937 FAM229BQ4G0N7 80 aa15.65■□□□□ 0.1
ATPAF1-202ENST00000371937 CDK2AP2O75956 126 aa15.64■□□□□ 0.09
ATPAF1-202ENST00000371937 PCP4P48539 62 aa15.64■□□□□ 0.09
ATPAF1-202ENST00000371937 ATP5EP2Q5VTU8 51 aa15.64■□□□□ 0.09
ATPAF1-202ENST00000371937 TRBV7-7A0A0K0K1E9 115 aa15.61■□□□□ 0.09
ATPAF1-202ENST00000371937 KRTAP1-4P0C5Y4 121 aa15.59■□□□□ 0.09
ATPAF1-202ENST00000371937 KRTAP10-4P60372 401 aaPredicted RBP15.59■□□□□ 0.09
ATPAF1-202ENST00000371937 IMUPQ9GZP8 106 aa15.59■□□□□ 0.09
ATPAF1-202ENST00000371937 A0A087WSZ3 146 aa15.58■□□□□ 0.08
ATPAF1-202ENST00000371937 IGKV3D-7A0A0C4DH55 119 aa15.58■□□□□ 0.08
ATPAF1-202ENST00000371937 SSBP3-AS1Q7Z2R9 100 aa15.58■□□□□ 0.08
ATPAF1-202ENST00000371937 SCGB1A1P11684 91 aa15.57■□□□□ 0.08
ATPAF1-202ENST00000371937 FAM229AH3BQW9 127 aa15.56■□□□□ 0.08
ATPAF1-202ENST00000371937 PLA2G1BP04054 148 aaKnown RBP15.55■□□□□ 0.08
ATPAF1-202ENST00000371937 A0A087X002 238 aa15.54■□□□□ 0.08
ATPAF1-202ENST00000371937 CXCL6P80162 114 aa15.54■□□□□ 0.08
ATPAF1-202ENST00000371937 FAT1Q14517 4588 aa15.53■□□□□ 0.08
ATPAF1-202ENST00000371937 KRTAP13-2Q52LG2 175 aa15.5■□□□□ 0.07
ATPAF1-202ENST00000371937 HRCT1Q6UXD1 115 aa15.48■□□□□ 0.07
ATPAF1-202ENST00000371937 BPY2O14599 106 aa15.47■□□□□ 0.07
ATPAF1-202ENST00000371937 CD164Q04900 197 aa15.47■□□□□ 0.07
ATPAF1-202ENST00000371937 SS18L2Q9UHA2 77 aa15.43■□□□□ 0.06
ATPAF1-202ENST00000371937 HIST1H4AP62805 103 aaKnown RBP15.43■□□□□ 0.06
ATPAF1-202ENST00000371937 Q5VSD8 79 aa15.4■□□□□ 0.06
ATPAF1-202ENST00000371937 HSPG2P98160 4391 aa15.39■□□□□ 0.05
ATPAF1-202ENST00000371937 TYMSOSQ8TAI1 123 aa15.38■□□□□ 0.05
ATPAF1-202ENST00000371937 RYR1P21817 5038 aa15.38■□□□□ 0.05
ATPAF1-202ENST00000371937 LINC00472Q9H8W2 130 aa15.35■□□□□ 0.05
ATPAF1-202ENST00000371937 EPPK1P58107 5090 aaKnown RBP15.34■□□□□ 0.05
ATPAF1-202ENST00000371937 PRR26Q8N8Z3 221 aa15.33■□□□□ 0.05
ATPAF1-202ENST00000371937 A0A087WVE0 104 aa15.33■□□□□ 0.04
ATPAF1-202ENST00000371937 DEFB116Q30KQ4 102 aa15.31■□□□□ 0.04
ATPAF1-202ENST00000371937 DSCR10P59022 87 aa15.3■□□□□ 0.04
ATPAF1-202ENST00000371937 FAM236AA0A1B0GUQ0 79 aa15.29■□□□□ 0.04
ATPAF1-202ENST00000371937 FAM236BA0A1B0GV22 79 aa15.29■□□□□ 0.04
ATPAF1-202ENST00000371937 J3KT08 172 aa15.29■□□□□ 0.04
ATPAF1-202ENST00000371937 C4orf48Q5BLP8 95 aa15.29■□□□□ 0.04
ATPAF1-202ENST00000371937 Q8N9L7 120 aa15.28■□□□□ 0.04
ATPAF1-202ENST00000371937 IGKV4-1P06312 121 aa15.27■□□□□ 0.03
ATPAF1-202ENST00000371937 Q8N1X5 172 aa15.26■□□□□ 0.03
ATPAF1-202ENST00000371937 Q96NJ1 140 aa15.25■□□□□ 0.03
ATPAF1-202ENST00000371937 KIAA1109Q2LD37 5005 aa15.25■□□□□ 0.03
ATPAF1-202ENST00000371937 Q5XG85 94 aa15.24■□□□□ 0.03
ATPAF1-202ENST00000371937 ASB16-AS1Q495Z4 193 aa15.23■□□□□ 0.03
ATPAF1-202ENST00000371937 PKHD1L1Q86WI1 4243 aa15.22■□□□□ 0.03
ATPAF1-202ENST00000371937 SPINK1P00995 79 aa15.22■□□□□ 0.03
ATPAF1-202ENST00000371937 K7EQZ3 153 aa15.21■□□□□ 0.03
ATPAF1-202ENST00000371937 LIMD2Q9BT23 127 aa15.21■□□□□ 0.03
ATPAF1-202ENST00000371937 SPAG11AQ6PDA7 123 aa15.2■□□□□ 0.02
ATPAF1-202ENST00000371937 LINC00304Q8N9R0 145 aa15.2■□□□□ 0.02
ATPAF1-202ENST00000371937 A8MWP4 228 aa15.19■□□□□ 0.02
ATPAF1-202ENST00000371937 KRTAP17-1Q9BYP8 105 aa15.17■□□□□ 0.02
ATPAF1-202ENST00000371937 NDUFB1O75438 58 aa15.15■□□□□ 0.02
ATPAF1-202ENST00000371937 PRR15Q8IV56 129 aa15.14■□□□□ 0.01
ATPAF1-202ENST00000371937 RPS29P62273 56 aaKnown RBP15.13■□□□□ 0.01
ATPAF1-202ENST00000371937 ATOX1O00244 68 aa15.12■□□□□ 0.01
ATPAF1-202ENST00000371937 ANAPC13Q9BS18 74 aa15.1■□□□□ 0.01
ATPAF1-202ENST00000371937 C1orf195Q5TG92 126 aa15.06■□□□□ 0
ATPAF1-202ENST00000371937 HCG22E2RYF7 251 aa15.05■□□□□ -0
ATPAF1-202ENST00000371937 A0A1B0GVX0 72 aa15.02■□□□□ -0
ATPAF1-202ENST00000371937 KRTAP10-8P60410 259 aa15.01□□□□□ -0.01
ATPAF1-202ENST00000371937 IGHV6-1A0A0B4J1U7 121 aa14.98□□□□□ -0.01
ATPAF1-202ENST00000371937 SMIM20Q8N5G0 67 aa14.96□□□□□ -0.01
ATPAF1-202ENST00000371937 WFDC13Q8IUB5 93 aa14.95□□□□□ -0.02
ATPAF1-202ENST00000371937 CASC2Q6XLA1 102 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms