RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
USP1-202ENST00000371146 A0A0J9YXY3 114 aa4.54□□□□□ -1.68
USP1-202ENST00000371146 H0Y9J4 135 aa4.54□□□□□ -1.68
USP1-202ENST00000371146 RPL37AP61513 92 aaKnown RBP4.54□□□□□ -1.68
USP1-202ENST00000371146 Q5VSD8 79 aa4.54□□□□□ -1.68
USP1-202ENST00000371146 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
USP1-202ENST00000371146 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
USP1-202ENST00000371146 IGLV9-49A0A0B4J1Y8 123 aa4.52□□□□□ -1.69
USP1-202ENST00000371146 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
USP1-202ENST00000371146 PRR34Q9NV39 138 aa4.52□□□□□ -1.69
USP1-202ENST00000371146 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
USP1-202ENST00000371146 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
USP1-202ENST00000371146 CYP4F30PQ9H0H9 118 aa4.51□□□□□ -1.69
USP1-202ENST00000371146 Q5VV11 94 aa4.51□□□□□ -1.69
USP1-202ENST00000371146 PRYO14603 147 aa4.51□□□□□ -1.69
USP1-202ENST00000371146 C14orf132Q9NPU4 83 aa4.51□□□□□ -1.69
USP1-202ENST00000371146 PSPHP1O15172 72 aa4.5□□□□□ -1.69
USP1-202ENST00000371146 PLECQ15149 4684 aaKnown RBP4.5□□□□□ -1.69
USP1-202ENST00000371146 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
USP1-202ENST00000371146 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
USP1-202ENST00000371146 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
USP1-202ENST00000371146 Q8IZM0 81 aa4.49□□□□□ -1.69
USP1-202ENST00000371146 LYSTQ99698 3801 aa4.49□□□□□ -1.69
USP1-202ENST00000371146 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
USP1-202ENST00000371146 Q6ZRN7 208 aaPredicted RBP4.48□□□□□ -1.69
USP1-202ENST00000371146 LINC00167Q96N53 147 aa4.48□□□□□ -1.69
USP1-202ENST00000371146 CMYA5Q8N3K9 4069 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 A8MU10 97 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 PRR4Q16378 134 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 A0A087X002 238 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 ASB16-AS1Q495Z4 193 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 SPINK6Q6UWN8 80 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
USP1-202ENST00000371146 PSORS1C2Q9UIG4 136 aa4.46□□□□□ -1.69
USP1-202ENST00000371146 GVQW2A0A096LPI5 108 aaPredicted RBP4.46□□□□□ -1.7
USP1-202ENST00000371146 JMJD7-PLA2G4BH0Y9G9 81 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 NREPQ16612 68 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 C6orf99Q4VX62 202 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 KMT2AQ03164 3969 aa4.46□□□□□ -1.7
USP1-202ENST00000371146 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
USP1-202ENST00000371146 Q75L30 129 aa4.45□□□□□ -1.7
USP1-202ENST00000371146 H0YGX0 51 aa4.44□□□□□ -1.7
USP1-202ENST00000371146 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
USP1-202ENST00000371146 RETNLBQ9BQ08 111 aa4.44□□□□□ -1.7
USP1-202ENST00000371146 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
USP1-202ENST00000371146 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 LINC01547P58512 204 aaPredicted RBP4.42□□□□□ -1.7
USP1-202ENST00000371146 LINC00308Q8TCZ7 52 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 REG3GQ6UW15 175 aa4.42□□□□□ -1.7
USP1-202ENST00000371146 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
USP1-202ENST00000371146 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
USP1-202ENST00000371146 KRTAP26-1Q6PEX3 210 aa4.41□□□□□ -1.7
USP1-202ENST00000371146 ORMDL1Q9P0S3 153 aa4.41□□□□□ -1.7
USP1-202ENST00000371146 RYR3Q15413 4870 aa4.41□□□□□ -1.7
USP1-202ENST00000371146 MOBPQ13875 183 aa4.4□□□□□ -1.7
USP1-202ENST00000371146 OCR1Q9BZK8 76 aa4.4□□□□□ -1.7
USP1-202ENST00000371146 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
USP1-202ENST00000371146 ZNF706Q9Y5V0 76 aaPredicted RBP4.4□□□□□ -1.71
USP1-202ENST00000371146 BPY2O14599 106 aa4.39□□□□□ -1.71
USP1-202ENST00000371146 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
USP1-202ENST00000371146 TYMSOSQ8TAI1 123 aa4.39□□□□□ -1.71
USP1-202ENST00000371146 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
USP1-202ENST00000371146 ST20-AS1Q8NBB2 130 aa4.38□□□□□ -1.71
USP1-202ENST00000371146 COX7BP24311 80 aa4.38□□□□□ -1.71
USP1-202ENST00000371146 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
USP1-202ENST00000371146 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
USP1-202ENST00000371146 A6NED7 52 aa4.37□□□□□ -1.71
USP1-202ENST00000371146 Q6ZQY7 126 aa4.37□□□□□ -1.71
USP1-202ENST00000371146 Q8N1X5 172 aa4.37□□□□□ -1.71
USP1-202ENST00000371146 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
USP1-202ENST00000371146 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
USP1-202ENST00000371146 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
USP1-202ENST00000371146 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 PDE6GP18545 87 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 FAT1Q14517 4588 aa4.35□□□□□ -1.71
USP1-202ENST00000371146 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
USP1-202ENST00000371146 Q8NDZ9 215 aa4.34□□□□□ -1.71
USP1-202ENST00000371146 SMIM11BQ8TCY0 68 aa4.34□□□□□ -1.71
USP1-202ENST00000371146 Q6ZQT0 140 aa4.34□□□□□ -1.72
USP1-202ENST00000371146 PRR15LQ9BU68 103 aa4.34□□□□□ -1.72
USP1-202ENST00000371146 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 Q9BRP9 147 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 COX17Q14061 63 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 DNAH11Q96DT5 4516 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
USP1-202ENST00000371146 RYR1P21817 5038 aa4.32□□□□□ -1.72
USP1-202ENST00000371146 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
USP1-202ENST00000371146 ZNF861PO60384 105 aa4.32□□□□□ -1.72
USP1-202ENST00000371146 NDUFB1O75438 58 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms