RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
PRPF38B-201ENST00000370021 IGLV9-49A0A0B4J1Y8 123 aa6.73□□□□□ -1.33
PRPF38B-201ENST00000370021 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
PRPF38B-201ENST00000370021 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
PRPF38B-201ENST00000370021 IGFL1Q6UW32 110 aa6.71□□□□□ -1.34
PRPF38B-201ENST00000370021 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
PRPF38B-201ENST00000370021 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
PRPF38B-201ENST00000370021 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
PRPF38B-201ENST00000370021 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
PRPF38B-201ENST00000370021 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
PRPF38B-201ENST00000370021 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
PRPF38B-201ENST00000370021 J3QKU1 62 aa6.66□□□□□ -1.34
PRPF38B-201ENST00000370021 KRTAP1-1Q07627 177 aa6.66□□□□□ -1.34
PRPF38B-201ENST00000370021 Q1T7F1 81 aa6.65□□□□□ -1.34
PRPF38B-201ENST00000370021 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
PRPF38B-201ENST00000370021 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
PRPF38B-201ENST00000370021 PHF5AQ7RTV0 110 aaKnown RBP6.65□□□□□ -1.35
PRPF38B-201ENST00000370021 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
PRPF38B-201ENST00000370021 COA5Q86WW8 74 aa6.63□□□□□ -1.35
PRPF38B-201ENST00000370021 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
PRPF38B-201ENST00000370021 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
PRPF38B-201ENST00000370021 KMT2BQ9UMN6 2715 aaPredicted RBP6.61□□□□□ -1.35
PRPF38B-201ENST00000370021 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
PRPF38B-201ENST00000370021 Q5VV11 94 aa6.61□□□□□ -1.35
PRPF38B-201ENST00000370021 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
PRPF38B-201ENST00000370021 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
PRPF38B-201ENST00000370021 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
PRPF38B-201ENST00000370021 SPRR4Q96PI1 79 aa6.59□□□□□ -1.35
PRPF38B-201ENST00000370021 STAB2Q8WWQ8 2551 aa6.59□□□□□ -1.35
PRPF38B-201ENST00000370021 KRTAP10-11P60412 298 aa6.58□□□□□ -1.36
PRPF38B-201ENST00000370021 TENM2Q9NT68 2774 aa6.57□□□□□ -1.36
PRPF38B-201ENST00000370021 ANAPC11Q9NYG5 84 aa6.56□□□□□ -1.36
PRPF38B-201ENST00000370021 A0A1B0GW54 56 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 A8MWP4 228 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 CD164Q04900 197 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 RBM12B-AS1Q9P1G2 102 aa6.55□□□□□ -1.36
PRPF38B-201ENST00000370021 TNP2Q05952 138 aa6.54□□□□□ -1.36
PRPF38B-201ENST00000370021 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
PRPF38B-201ENST00000370021 PRR26Q8N8Z3 221 aa6.54□□□□□ -1.36
PRPF38B-201ENST00000370021 DNAH10OSP0CZ25 163 aa6.53□□□□□ -1.36
PRPF38B-201ENST00000370021 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
PRPF38B-201ENST00000370021 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
PRPF38B-201ENST00000370021 CSMD3Q7Z407 3707 aa6.52□□□□□ -1.37
PRPF38B-201ENST00000370021 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
PRPF38B-201ENST00000370021 LCA10Q71F78 164 aa6.52□□□□□ -1.37
PRPF38B-201ENST00000370021 H3BNG1 76 aa6.51□□□□□ -1.37
PRPF38B-201ENST00000370021 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
PRPF38B-201ENST00000370021 IGLV8-61A0A075B6I0 122 aa6.5□□□□□ -1.37
PRPF38B-201ENST00000370021 SPRR1AP35321 89 aa6.5□□□□□ -1.37
PRPF38B-201ENST00000370021 MOBPQ13875 183 aa6.49□□□□□ -1.37
PRPF38B-201ENST00000370021 ATP11AUNQ6ZP68 121 aa6.49□□□□□ -1.37
PRPF38B-201ENST00000370021 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
PRPF38B-201ENST00000370021 SPINK7P58062 85 aa6.49□□□□□ -1.37
PRPF38B-201ENST00000370021 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
PRPF38B-201ENST00000370021 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
PRPF38B-201ENST00000370021 SPINK1P00995 79 aa6.46□□□□□ -1.38
PRPF38B-201ENST00000370021 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.38
PRPF38B-201ENST00000370021 ANK2Q01484 3957 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 LCE6AA0A183 80 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 K7EIL1 84 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 H3BPC8 53 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
PRPF38B-201ENST00000370021 C8orf17Q9NRJ1 99 aa6.43□□□□□ -1.38
PRPF38B-201ENST00000370021 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
PRPF38B-201ENST00000370021 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
PRPF38B-201ENST00000370021 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
PRPF38B-201ENST00000370021 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
PRPF38B-201ENST00000370021 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
PRPF38B-201ENST00000370021 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
PRPF38B-201ENST00000370021 IGLV7-46A0A075B6I9 117 aa6.41□□□□□ -1.38
PRPF38B-201ENST00000370021 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
PRPF38B-201ENST00000370021 Q75L30 129 aa6.41□□□□□ -1.38
PRPF38B-201ENST00000370021 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
PRPF38B-201ENST00000370021 HRES1P13985 223 aa6.4□□□□□ -1.38
PRPF38B-201ENST00000370021 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
PRPF38B-201ENST00000370021 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
PRPF38B-201ENST00000370021 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
PRPF38B-201ENST00000370021 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
PRPF38B-201ENST00000370021 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
PRPF38B-201ENST00000370021 A0A1B0GU69 56 aa6.39□□□□□ -1.39
PRPF38B-201ENST00000370021 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 A0A087X002 238 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 KRTAP24-1Q3LI83 254 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
PRPF38B-201ENST00000370021 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
PRPF38B-201ENST00000370021 ADM2Q7Z4H4 148 aa6.37□□□□□ -1.39
PRPF38B-201ENST00000370021 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
PRPF38B-201ENST00000370021 PANO1I0J062 215 aa6.36□□□□□ -1.39
PRPF38B-201ENST00000370021 MDFIQ99750 246 aa6.36□□□□□ -1.39
PRPF38B-201ENST00000370021 DNAH3Q8TD57 4116 aa6.35□□□□□ -1.39
PRPF38B-201ENST00000370021 LINC00313P59037 77 aa6.34□□□□□ -1.39
PRPF38B-201ENST00000370021 ACYP2P14621 99 aa6.34□□□□□ -1.39
PRPF38B-201ENST00000370021 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
PRPF38B-201ENST00000370021 A6NN06 94 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms