RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
PHGDH-201ENST00000369407 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
PHGDH-201ENST00000369407 Q5VV11 94 aa7.86□□□□□ -1.15
PHGDH-201ENST00000369407 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
PHGDH-201ENST00000369407 LCE6AA0A183 80 aa7.85□□□□□ -1.15
PHGDH-201ENST00000369407 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
PHGDH-201ENST00000369407 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
PHGDH-201ENST00000369407 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
PHGDH-201ENST00000369407 UBE2AP49459 152 aa7.83□□□□□ -1.16
PHGDH-201ENST00000369407 LINC01556Q5JQF7 62 aa7.83□□□□□ -1.16
PHGDH-201ENST00000369407 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
PHGDH-201ENST00000369407 LINC00588Q9Y4M8 146 aa7.83□□□□□ -1.16
PHGDH-201ENST00000369407 PRLHP81277 87 aa7.82□□□□□ -1.16
PHGDH-201ENST00000369407 A0A087WSZ3 146 aa7.81□□□□□ -1.16
PHGDH-201ENST00000369407 SPRR1AP35321 89 aa7.81□□□□□ -1.16
PHGDH-201ENST00000369407 IGFL1Q6UW32 110 aa7.81□□□□□ -1.16
PHGDH-201ENST00000369407 KRTAP10-11P60412 298 aa7.8□□□□□ -1.16
PHGDH-201ENST00000369407 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
PHGDH-201ENST00000369407 B9D2Q9BPU9 175 aa7.79□□□□□ -1.16
PHGDH-201ENST00000369407 H3BNG1 76 aa7.79□□□□□ -1.16
PHGDH-201ENST00000369407 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
PHGDH-201ENST00000369407 REG3GQ6UW15 175 aa7.77□□□□□ -1.16
PHGDH-201ENST00000369407 LCA10Q71F78 164 aa7.77□□□□□ -1.16
PHGDH-201ENST00000369407 MGAM2Q2M2H8 2515 aa7.77□□□□□ -1.17
PHGDH-201ENST00000369407 MP68P56378 58 aa7.76□□□□□ -1.17
PHGDH-201ENST00000369407 A0A096LNI7 61 aa7.76□□□□□ -1.17
PHGDH-201ENST00000369407 A0A1B0GW54 56 aa7.76□□□□□ -1.17
PHGDH-201ENST00000369407 TLX1NBP0CAT3 122 aa7.76□□□□□ -1.17
PHGDH-201ENST00000369407 PLA2G2DQ9UNK4 145 aa7.75□□□□□ -1.17
PHGDH-201ENST00000369407 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
PHGDH-201ENST00000369407 Q8N9P0 234 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-201ENST00000369407 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
PHGDH-201ENST00000369407 H3BS24 57 aa7.73□□□□□ -1.17
PHGDH-201ENST00000369407 LYSTQ99698 3801 aa7.73□□□□□ -1.17
PHGDH-201ENST00000369407 DNAH1Q9P2D7 4330 aa7.73□□□□□ -1.17
PHGDH-201ENST00000369407 PRAC1Q96KF2 57 aa7.73□□□□□ -1.17
PHGDH-201ENST00000369407 IGLV5-37A0A075B6J1 123 aa7.73□□□□□ -1.17
PHGDH-201ENST00000369407 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
PHGDH-201ENST00000369407 H0Y9P7 68 aa7.72□□□□□ -1.17
PHGDH-201ENST00000369407 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
PHGDH-201ENST00000369407 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
PHGDH-201ENST00000369407 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
PHGDH-201ENST00000369407 NDUFB1O75438 58 aa7.69□□□□□ -1.18
PHGDH-201ENST00000369407 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
PHGDH-201ENST00000369407 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
PHGDH-201ENST00000369407 NDUFS5O43920 106 aa7.69□□□□□ -1.18
PHGDH-201ENST00000369407 MDFIQ99750 246 aa7.69□□□□□ -1.18
PHGDH-201ENST00000369407 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
PHGDH-201ENST00000369407 CNBPP62633 177 aaKnown RBP7.68□□□□□ -1.18
PHGDH-201ENST00000369407 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
PHGDH-201ENST00000369407 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-201ENST00000369407 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
PHGDH-201ENST00000369407 C7orf65Q6ZTY9 151 aa7.66□□□□□ -1.18
PHGDH-201ENST00000369407 H0Y9J4 135 aa7.65□□□□□ -1.18
PHGDH-201ENST00000369407 A6NN06 94 aa7.65□□□□□ -1.18
PHGDH-201ENST00000369407 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.19
PHGDH-201ENST00000369407 CMYA5Q8N3K9 4069 aa7.64□□□□□ -1.19
PHGDH-201ENST00000369407 COA5Q86WW8 74 aa7.63□□□□□ -1.19
PHGDH-201ENST00000369407 MOBPQ13875 183 aa7.63□□□□□ -1.19
PHGDH-201ENST00000369407 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
PHGDH-201ENST00000369407 DNAH9Q9NYC9 4486 aa7.62□□□□□ -1.19
PHGDH-201ENST00000369407 TENM2Q9NT68 2774 aa7.62□□□□□ -1.19
PHGDH-201ENST00000369407 SPINK7P58062 85 aa7.61□□□□□ -1.19
PHGDH-201ENST00000369407 A8MWP4 228 aa7.6□□□□□ -1.19
PHGDH-201ENST00000369407 KRTAP1-5Q9BYS1 174 aa7.6□□□□□ -1.19
PHGDH-201ENST00000369407 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
PHGDH-201ENST00000369407 LINC00472Q9H8W2 130 aa7.59□□□□□ -1.19
PHGDH-201ENST00000369407 IGLV8-61A0A075B6I0 122 aa7.59□□□□□ -1.19
PHGDH-201ENST00000369407 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
PHGDH-201ENST00000369407 C9orf163Q8N9P6 203 aa7.58□□□□□ -1.2
PHGDH-201ENST00000369407 STAB2Q8WWQ8 2551 aa7.58□□□□□ -1.2
PHGDH-201ENST00000369407 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
PHGDH-201ENST00000369407 LINC00313P59037 77 aa7.57□□□□□ -1.2
PHGDH-201ENST00000369407 HUWE1Q7Z6Z7 4374 aaKnown RBP7.57□□□□□ -1.2
PHGDH-201ENST00000369407 Q75L30 129 aa7.57□□□□□ -1.2
PHGDH-201ENST00000369407 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
PHGDH-201ENST00000369407 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
PHGDH-201ENST00000369407 KRTAP24-1Q3LI83 254 aa7.54□□□□□ -1.2
PHGDH-201ENST00000369407 H3BPC8 53 aa7.52□□□□□ -1.21
PHGDH-201ENST00000369407 PANO1I0J062 215 aa7.5□□□□□ -1.21
PHGDH-201ENST00000369407 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
PHGDH-201ENST00000369407 IGHV6-1A0A0B4J1U7 121 aa7.49□□□□□ -1.21
PHGDH-201ENST00000369407 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
PHGDH-201ENST00000369407 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
PHGDH-201ENST00000369407 SPRR1BP22528 89 aa7.47□□□□□ -1.21
PHGDH-201ENST00000369407 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
PHGDH-201ENST00000369407 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
PHGDH-201ENST00000369407 PRR26Q8N8Z3 221 aa7.46□□□□□ -1.22
PHGDH-201ENST00000369407 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
PHGDH-201ENST00000369407 Q96NJ1 140 aa7.45□□□□□ -1.22
PHGDH-201ENST00000369407 A0A087X002 238 aa7.45□□□□□ -1.22
PHGDH-201ENST00000369407 K7EIL1 84 aa7.45□□□□□ -1.22
PHGDH-201ENST00000369407 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
PHGDH-201ENST00000369407 C8orf17Q9NRJ1 99 aa7.44□□□□□ -1.22
PHGDH-201ENST00000369407 FRAS1Q86XX4 4008 aa7.43□□□□□ -1.22
PHGDH-201ENST00000369407 HRES1P13985 223 aa7.43□□□□□ -1.22
PHGDH-201ENST00000369407 LINC01558Q9Y6Z2 57 aa7.39□□□□□ -1.23
PHGDH-201ENST00000369407 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
PHGDH-201ENST00000369407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms