RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 H3BQ85 93 aa6.85□□□□□ -1.31
TPM3-212ENST00000368533 TNP2Q05952 138 aa6.85□□□□□ -1.31
TPM3-212ENST00000368533 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
TPM3-212ENST00000368533 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
TPM3-212ENST00000368533 IGKV4-1P06312 121 aa6.84□□□□□ -1.31
TPM3-212ENST00000368533 CHTF8P0CG12 524 aa6.84□□□□□ -1.31
TPM3-212ENST00000368533 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
TPM3-212ENST00000368533 PRR15Q8IV56 129 aa6.83□□□□□ -1.32
TPM3-212ENST00000368533 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
TPM3-212ENST00000368533 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
TPM3-212ENST00000368533 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
TPM3-212ENST00000368533 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
TPM3-212ENST00000368533 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
TPM3-212ENST00000368533 A8MUN3 132 aa6.81□□□□□ -1.32
TPM3-212ENST00000368533 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
TPM3-212ENST00000368533 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
TPM3-212ENST00000368533 A0A096LNI7 61 aa6.8□□□□□ -1.32
TPM3-212ENST00000368533 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
TPM3-212ENST00000368533 WWC2-AS2Q96NR7 200 aa6.78□□□□□ -1.32
TPM3-212ENST00000368533 KCNQ1DNQ9H478 68 aa6.77□□□□□ -1.33
TPM3-212ENST00000368533 UBE2BP63146 152 aa6.77□□□□□ -1.33
TPM3-212ENST00000368533 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
TPM3-212ENST00000368533 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 PANO1I0J062 215 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 Q8N377 158 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
TPM3-212ENST00000368533 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
TPM3-212ENST00000368533 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
TPM3-212ENST00000368533 Q1T7F1 81 aa6.75□□□□□ -1.33
TPM3-212ENST00000368533 DHRS4-AS1Q9P1J3 65 aa6.74□□□□□ -1.33
TPM3-212ENST00000368533 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
TPM3-212ENST00000368533 Q6ZRX8 168 aa6.74□□□□□ -1.33
TPM3-212ENST00000368533 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
TPM3-212ENST00000368533 LINC00476Q8WZB0 136 aa6.73□□□□□ -1.33
TPM3-212ENST00000368533 IGLV1-50A0A075B6I6 118 aa6.72□□□□□ -1.33
TPM3-212ENST00000368533 CD164Q04900 197 aa6.72□□□□□ -1.33
TPM3-212ENST00000368533 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
TPM3-212ENST00000368533 Q9BRP9 147 aa6.72□□□□□ -1.33
TPM3-212ENST00000368533 A0A087WTM6 91 aa6.72□□□□□ -1.33
TPM3-212ENST00000368533 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
TPM3-212ENST00000368533 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
TPM3-212ENST00000368533 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
TPM3-212ENST00000368533 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
TPM3-212ENST00000368533 Q6ZR54 194 aa6.71□□□□□ -1.34
TPM3-212ENST00000368533 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.34
TPM3-212ENST00000368533 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
TPM3-212ENST00000368533 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
TPM3-212ENST00000368533 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
TPM3-212ENST00000368533 CHKB-CPT1BH3BT56 60 aa6.7□□□□□ -1.34
TPM3-212ENST00000368533 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
TPM3-212ENST00000368533 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
TPM3-212ENST00000368533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
TPM3-212ENST00000368533 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
TPM3-212ENST00000368533 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
TPM3-212ENST00000368533 Q5VV11 94 aa6.69□□□□□ -1.34
TPM3-212ENST00000368533 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 RTL8CO15255 209 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 PRLHP81277 87 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
TPM3-212ENST00000368533 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
TPM3-212ENST00000368533 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
TPM3-212ENST00000368533 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
TPM3-212ENST00000368533 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
TPM3-212ENST00000368533 K7EQZ3 153 aa6.66□□□□□ -1.34
TPM3-212ENST00000368533 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
TPM3-212ENST00000368533 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
TPM3-212ENST00000368533 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
TPM3-212ENST00000368533 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
TPM3-212ENST00000368533 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.35
TPM3-212ENST00000368533 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.35
TPM3-212ENST00000368533 PRR15LQ9BU68 103 aa6.65□□□□□ -1.35
TPM3-212ENST00000368533 SPRR1AP35321 89 aa6.64□□□□□ -1.35
TPM3-212ENST00000368533 PKHD1P08F94 4074 aa6.64□□□□□ -1.35
TPM3-212ENST00000368533 Q8NBF4 154 aa6.64□□□□□ -1.35
TPM3-212ENST00000368533 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
TPM3-212ENST00000368533 WFDC13Q8IUB5 93 aa6.63□□□□□ -1.35
TPM3-212ENST00000368533 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
TPM3-212ENST00000368533 KTN1-AS1Q86SY8 53 aa6.62□□□□□ -1.35
TPM3-212ENST00000368533 DSCR10P59022 87 aa6.62□□□□□ -1.35
TPM3-212ENST00000368533 LCA10Q71F78 164 aa6.62□□□□□ -1.35
TPM3-212ENST00000368533 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
TPM3-212ENST00000368533 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
TPM3-212ENST00000368533 LCE6AA0A183 80 aa6.6□□□□□ -1.35
TPM3-212ENST00000368533 A6NED7 52 aa6.59□□□□□ -1.35
TPM3-212ENST00000368533 UBE2AP49459 152 aa6.59□□□□□ -1.35
TPM3-212ENST00000368533 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
TPM3-212ENST00000368533 A0A087WSZ3 146 aa6.58□□□□□ -1.36
TPM3-212ENST00000368533 SPACA4Q8TDM5 124 aa6.58□□□□□ -1.36
TPM3-212ENST00000368533 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
TPM3-212ENST00000368533 PKD1P98161 4303 aa6.58□□□□□ -1.36
TPM3-212ENST00000368533 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
TPM3-212ENST00000368533 A0A1B0GW54 56 aa6.56□□□□□ -1.36
TPM3-212ENST00000368533 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
TPM3-212ENST00000368533 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
TPM3-212ENST00000368533 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
TPM3-212ENST00000368533 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms