RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
CCDC7-203ENST00000362006 F8WEM9 126 aa10.85□□□□□ -0.67
CCDC7-203ENST00000362006 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
CCDC7-203ENST00000362006 SRRM2Q9UQ35 2752 aaKnown RBP10.83□□□□□ -0.68
CCDC7-203ENST00000362006 EPPK1P58107 5090 aaKnown RBP10.82□□□□□ -0.68
CCDC7-203ENST00000362006 DSCR8Q96T75 97 aa10.81□□□□□ -0.68
CCDC7-203ENST00000362006 PDE6GP18545 87 aa10.81□□□□□ -0.68
CCDC7-203ENST00000362006 PCP4P48539 62 aa10.81□□□□□ -0.68
CCDC7-203ENST00000362006 Q5VSD8 79 aa10.81□□□□□ -0.68
CCDC7-203ENST00000362006 C21orf62-AS1Q17RA5 79 aa10.8□□□□□ -0.68
CCDC7-203ENST00000362006 IGLV8-61A0A075B6I0 122 aa10.79□□□□□ -0.68
CCDC7-203ENST00000362006 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
CCDC7-203ENST00000362006 A0A1B0GV72 72 aa10.79□□□□□ -0.68
CCDC7-203ENST00000362006 C14orf132Q9NPU4 83 aa10.79□□□□□ -0.68
CCDC7-203ENST00000362006 HSPG2P98160 4391 aa10.78□□□□□ -0.68
CCDC7-203ENST00000362006 Q8N1X5 172 aa10.78□□□□□ -0.68
CCDC7-203ENST00000362006 RYR1P21817 5038 aa10.78□□□□□ -0.68
CCDC7-203ENST00000362006 LOC110117498A0A087WWA1 95 aa10.78□□□□□ -0.68
CCDC7-203ENST00000362006 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.69
CCDC7-203ENST00000362006 FAT1Q14517 4588 aa10.77□□□□□ -0.69
CCDC7-203ENST00000362006 Q6JHZ5 121 aa10.76□□□□□ -0.69
CCDC7-203ENST00000362006 J3QR89 54 aa10.76□□□□□ -0.69
CCDC7-203ENST00000362006 ANAPC11Q9NYG5 84 aa10.76□□□□□ -0.69
CCDC7-203ENST00000362006 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
CCDC7-203ENST00000362006 IGLV9-49A0A0B4J1Y8 123 aa10.73□□□□□ -0.69
CCDC7-203ENST00000362006 CRYGAP11844 174 aa10.73□□□□□ -0.69
CCDC7-203ENST00000362006 C9orf153Q5TBE3 101 aa10.73□□□□□ -0.69
CCDC7-203ENST00000362006 Q6ZQT0 140 aa10.73□□□□□ -0.69
CCDC7-203ENST00000362006 Q8NBF4 154 aa10.72□□□□□ -0.69
CCDC7-203ENST00000362006 CCKP06307 115 aa10.72□□□□□ -0.69
CCDC7-203ENST00000362006 KIAA1109Q2LD37 5005 aa10.7□□□□□ -0.7
CCDC7-203ENST00000362006 K7ERU9 68 aa10.7□□□□□ -0.7
CCDC7-203ENST00000362006 IGFL1Q6UW32 110 aa10.7□□□□□ -0.7
CCDC7-203ENST00000362006 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
CCDC7-203ENST00000362006 MOBPQ13875 183 aa10.69□□□□□ -0.7
CCDC7-203ENST00000362006 A0A087X002 238 aa10.67□□□□□ -0.7
CCDC7-203ENST00000362006 A0A1B0GW54 56 aa10.66□□□□□ -0.7
CCDC7-203ENST00000362006 ACYP1P07311 99 aa10.66□□□□□ -0.7
CCDC7-203ENST00000362006 FAM240AA0A1B0GVK7 77 aa10.65□□□□□ -0.7
CCDC7-203ENST00000362006 VPS25Q9BRG1 176 aa10.65□□□□□ -0.7
CCDC7-203ENST00000362006 KRTAP17-1Q9BYP8 105 aa10.65□□□□□ -0.7
CCDC7-203ENST00000362006 KRTAP13-2Q52LG2 175 aa10.64□□□□□ -0.71
CCDC7-203ENST00000362006 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
CCDC7-203ENST00000362006 A0A1W2PNM2 257 aa10.63□□□□□ -0.71
CCDC7-203ENST00000362006 Q6Q795 121 aa10.63□□□□□ -0.71
CCDC7-203ENST00000362006 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
CCDC7-203ENST00000362006 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
CCDC7-203ENST00000362006 CD164Q04900 197 aa10.59□□□□□ -0.71
CCDC7-203ENST00000362006 PRR26Q8N8Z3 221 aa10.59□□□□□ -0.71
CCDC7-203ENST00000362006 BIRC6Q9NR09 4857 aa10.58□□□□□ -0.72
CCDC7-203ENST00000362006 TRBV7-7A0A0K0K1E9 115 aa10.54□□□□□ -0.72
CCDC7-203ENST00000362006 LINC00846Q9NV44 126 aa10.53□□□□□ -0.72
CCDC7-203ENST00000362006 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.72
CCDC7-203ENST00000362006 UBL5Q9BZL1 73 aa10.52□□□□□ -0.73
CCDC7-203ENST00000362006 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
CCDC7-203ENST00000362006 A0A087WSZ3 146 aa10.51□□□□□ -0.73
CCDC7-203ENST00000362006 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
CCDC7-203ENST00000362006 SS18L2Q9UHA2 77 aa10.49□□□□□ -0.73
CCDC7-203ENST00000362006 LINC00304Q8N9R0 145 aa10.49□□□□□ -0.73
CCDC7-203ENST00000362006 NREPQ16612 68 aa10.48□□□□□ -0.73
CCDC7-203ENST00000362006 SPINK1P00995 79 aa10.48□□□□□ -0.73
CCDC7-203ENST00000362006 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
CCDC7-203ENST00000362006 OXTP01178 125 aa10.46□□□□□ -0.74
CCDC7-203ENST00000362006 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.74
CCDC7-203ENST00000362006 Q6ZVQ6 151 aa10.45□□□□□ -0.74
CCDC7-203ENST00000362006 CDIP1Q9H305 208 aa10.45□□□□□ -0.74
CCDC7-203ENST00000362006 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
CCDC7-203ENST00000362006 Q5XG85 94 aa10.45□□□□□ -0.74
CCDC7-203ENST00000362006 LIMD2Q9BT23 127 aa10.44□□□□□ -0.74
CCDC7-203ENST00000362006 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
CCDC7-203ENST00000362006 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
CCDC7-203ENST00000362006 ASB16-AS1Q495Z4 193 aa10.4□□□□□ -0.74
CCDC7-203ENST00000362006 HERC2O95714 4834 aa10.4□□□□□ -0.74
CCDC7-203ENST00000362006 ATP5EP2Q5VTU8 51 aa10.37□□□□□ -0.75
CCDC7-203ENST00000362006 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
CCDC7-203ENST00000362006 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
CCDC7-203ENST00000362006 BPY2O14599 106 aa10.35□□□□□ -0.75
CCDC7-203ENST00000362006 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
CCDC7-203ENST00000362006 J3KT08 172 aa10.34□□□□□ -0.75
CCDC7-203ENST00000362006 CXCL6P80162 114 aa10.34□□□□□ -0.75
CCDC7-203ENST00000362006 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
CCDC7-203ENST00000362006 SIGMAR1Q99720 223 aa10.34□□□□□ -0.75
CCDC7-203ENST00000362006 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
CCDC7-203ENST00000362006 Q96NJ1 140 aa10.32□□□□□ -0.76
CCDC7-203ENST00000362006 TNXBP22105 4242 aa10.29□□□□□ -0.76
CCDC7-203ENST00000362006 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
CCDC7-203ENST00000362006 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
CCDC7-203ENST00000362006 IGKV4-1P06312 121 aa10.28□□□□□ -0.76
CCDC7-203ENST00000362006 C1orf195Q5TG92 126 aa10.28□□□□□ -0.76
CCDC7-203ENST00000362006 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
CCDC7-203ENST00000362006 DSCR10P59022 87 aa10.25□□□□□ -0.77
CCDC7-203ENST00000362006 IMUPQ9GZP8 106 aa10.25□□□□□ -0.77
CCDC7-203ENST00000362006 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
CCDC7-203ENST00000362006 NDUFB1O75438 58 aa10.24□□□□□ -0.77
CCDC7-203ENST00000362006 A8MWP4 228 aa10.23□□□□□ -0.77
CCDC7-203ENST00000362006 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
CCDC7-203ENST00000362006 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.77
CCDC7-203ENST00000362006 J3QL48 77 aa10.21□□□□□ -0.77
CCDC7-203ENST00000362006 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
CCDC7-203ENST00000362006 HIST1H4AP62805 103 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms