RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
GPATCH3-201ENST00000361720 OXTP01178 125 aa11.75□□□□□ -0.53
GPATCH3-201ENST00000361720 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
GPATCH3-201ENST00000361720 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
GPATCH3-201ENST00000361720 PKD1P98161 4303 aa11.75□□□□□ -0.53
GPATCH3-201ENST00000361720 BPY2O14599 106 aa11.75□□□□□ -0.53
GPATCH3-201ENST00000361720 MRPL55Q7Z7F7 128 aaKnown RBP11.74□□□□□ -0.53
GPATCH3-201ENST00000361720 RYR3Q15413 4870 aa11.74□□□□□ -0.53
GPATCH3-201ENST00000361720 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
GPATCH3-201ENST00000361720 NDUFC1O43677 76 aa11.72□□□□□ -0.53
GPATCH3-201ENST00000361720 A0A1W2PNM2 257 aa11.71□□□□□ -0.53
GPATCH3-201ENST00000361720 Q8N9L7 120 aa11.71□□□□□ -0.54
GPATCH3-201ENST00000361720 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
GPATCH3-201ENST00000361720 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
GPATCH3-201ENST00000361720 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
GPATCH3-201ENST00000361720 KRTAP10-2P60368 255 aa11.69□□□□□ -0.54
GPATCH3-201ENST00000361720 Q8NBF4 154 aa11.69□□□□□ -0.54
GPATCH3-201ENST00000361720 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
GPATCH3-201ENST00000361720 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
GPATCH3-201ENST00000361720 SERP1Q9Y6X1 66 aa11.68□□□□□ -0.54
GPATCH3-201ENST00000361720 A0A096LNI7 61 aa11.68□□□□□ -0.54
GPATCH3-201ENST00000361720 SPRR4Q96PI1 79 aa11.68□□□□□ -0.54
GPATCH3-201ENST00000361720 CHTF8P0CG12 524 aa11.67□□□□□ -0.54
GPATCH3-201ENST00000361720 REG3GQ6UW15 175 aa11.67□□□□□ -0.54
GPATCH3-201ENST00000361720 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
GPATCH3-201ENST00000361720 OCR1Q9BZK8 76 aa11.66□□□□□ -0.54
GPATCH3-201ENST00000361720 F8WEM9 126 aa11.66□□□□□ -0.54
GPATCH3-201ENST00000361720 UBE2BP63146 152 aa11.65□□□□□ -0.54
GPATCH3-201ENST00000361720 PANO1I0J062 215 aa11.65□□□□□ -0.55
GPATCH3-201ENST00000361720 TMEM254Q8TBM7 123 aa11.65□□□□□ -0.55
GPATCH3-201ENST00000361720 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
GPATCH3-201ENST00000361720 PKHD1P08F94 4074 aa11.63□□□□□ -0.55
GPATCH3-201ENST00000361720 ATP5EP56381 51 aaPredicted RBP11.63□□□□□ -0.55
GPATCH3-201ENST00000361720 SMIM29Q86T20 159 aa11.61□□□□□ -0.55
GPATCH3-201ENST00000361720 C16orf90A8MZG2 172 aa11.6□□□□□ -0.55
GPATCH3-201ENST00000361720 Q5XG85 94 aa11.6□□□□□ -0.55
GPATCH3-201ENST00000361720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.59□□□□□ -0.55
GPATCH3-201ENST00000361720 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
GPATCH3-201ENST00000361720 C5orf47Q569G3 176 aa11.59□□□□□ -0.55
GPATCH3-201ENST00000361720 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
GPATCH3-201ENST00000361720 DNAH8Q96JB1 4490 aa11.57□□□□□ -0.56
GPATCH3-201ENST00000361720 DSCR10P59022 87 aa11.54□□□□□ -0.56
GPATCH3-201ENST00000361720 IGLV8-61A0A075B6I0 122 aa11.54□□□□□ -0.56
GPATCH3-201ENST00000361720 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
GPATCH3-201ENST00000361720 A0A1B0GVY2 172 aa11.53□□□□□ -0.56
GPATCH3-201ENST00000361720 KRTAP10-1P60331 282 aa11.52□□□□□ -0.57
GPATCH3-201ENST00000361720 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
GPATCH3-201ENST00000361720 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.57
GPATCH3-201ENST00000361720 C4orf26Q17RF5 130 aa11.51□□□□□ -0.57
GPATCH3-201ENST00000361720 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
GPATCH3-201ENST00000361720 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
GPATCH3-201ENST00000361720 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
GPATCH3-201ENST00000361720 PRLHP81277 87 aa11.48□□□□□ -0.57
GPATCH3-201ENST00000361720 SMIM26A0A096LP01 95 aa11.48□□□□□ -0.57
GPATCH3-201ENST00000361720 K7EQZ3 153 aa11.48□□□□□ -0.57
GPATCH3-201ENST00000361720 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
GPATCH3-201ENST00000361720 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
GPATCH3-201ENST00000361720 H0Y9J4 135 aa11.45□□□□□ -0.58
GPATCH3-201ENST00000361720 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
GPATCH3-201ENST00000361720 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
GPATCH3-201ENST00000361720 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
GPATCH3-201ENST00000361720 HRCT1Q6UXD1 115 aa11.44□□□□□ -0.58
GPATCH3-201ENST00000361720 SPRR1BP22528 89 aa11.43□□□□□ -0.58
GPATCH3-201ENST00000361720 HCG22E2RYF7 251 aa11.42□□□□□ -0.58
GPATCH3-201ENST00000361720 UBE2AP49459 152 aa11.42□□□□□ -0.58
GPATCH3-201ENST00000361720 A0A0G2JQZ4 141 aa11.41□□□□□ -0.58
GPATCH3-201ENST00000361720 Q6ZSA8 131 aa11.4□□□□□ -0.58
GPATCH3-201ENST00000361720 FP248Q71RG6 208 aaPredicted RBP11.39□□□□□ -0.59
GPATCH3-201ENST00000361720 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
GPATCH3-201ENST00000361720 A0A087WSZ3 146 aa11.38□□□□□ -0.59
GPATCH3-201ENST00000361720 CIRBP-AS1Q8TBR5 109 aa11.38□□□□□ -0.59
GPATCH3-201ENST00000361720 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
GPATCH3-201ENST00000361720 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
GPATCH3-201ENST00000361720 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
GPATCH3-201ENST00000361720 DEFB116Q30KQ4 102 aa11.31□□□□□ -0.6
GPATCH3-201ENST00000361720 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
GPATCH3-201ENST00000361720 KRTAP13-1Q8IUC0 172 aa11.28□□□□□ -0.6
GPATCH3-201ENST00000361720 WFDC13Q8IUB5 93 aa11.27□□□□□ -0.6
GPATCH3-201ENST00000361720 FAM229BQ4G0N7 80 aa11.27□□□□□ -0.61
GPATCH3-201ENST00000361720 LINC00472Q9H8W2 130 aa11.26□□□□□ -0.61
GPATCH3-201ENST00000361720 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
GPATCH3-201ENST00000361720 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
GPATCH3-201ENST00000361720 PRR15Q8IV56 129 aa11.26□□□□□ -0.61
GPATCH3-201ENST00000361720 PSORS1C2Q9UIG4 136 aa11.25□□□□□ -0.61
GPATCH3-201ENST00000361720 A8MWP4 228 aa11.24□□□□□ -0.61
GPATCH3-201ENST00000361720 VPS13BQ7Z7G8 4022 aa11.24□□□□□ -0.61
GPATCH3-201ENST00000361720 hDV103S1A0JD37 113 aa11.23□□□□□ -0.61
GPATCH3-201ENST00000361720 NDUFB1O75438 58 aa11.23□□□□□ -0.61
GPATCH3-201ENST00000361720 MP68P56378 58 aa11.23□□□□□ -0.61
GPATCH3-201ENST00000361720 CASC2Q6XLA1 102 aa11.21□□□□□ -0.61
GPATCH3-201ENST00000361720 CYP4F30PQ9H0H9 118 aa11.21□□□□□ -0.61
GPATCH3-201ENST00000361720 FAT1Q14517 4588 aa11.21□□□□□ -0.61
GPATCH3-201ENST00000361720 H3BPC8 53 aa11.19□□□□□ -0.62
GPATCH3-201ENST00000361720 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
GPATCH3-201ENST00000361720 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
GPATCH3-201ENST00000361720 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
GPATCH3-201ENST00000361720 HSPG2P98160 4391 aa11.16□□□□□ -0.62
GPATCH3-201ENST00000361720 PRO0628Q9UI54 55 aa11.15□□□□□ -0.62
GPATCH3-201ENST00000361720 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
GPATCH3-201ENST00000361720 MPLKIPQ8TAP9 179 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms