RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 Q9BRP9 147 aa9.61□□□□□ -0.87
UBAP1-202ENST00000359544 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
UBAP1-202ENST00000359544 Q5VV11 94 aa9.6□□□□□ -0.87
UBAP1-202ENST00000359544 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
UBAP1-202ENST00000359544 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
UBAP1-202ENST00000359544 LIMD2Q9BT23 127 aa9.59□□□□□ -0.87
UBAP1-202ENST00000359544 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
UBAP1-202ENST00000359544 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
UBAP1-202ENST00000359544 SPRR1AP35321 89 aa9.57□□□□□ -0.88
UBAP1-202ENST00000359544 H3BPC8 53 aa9.56□□□□□ -0.88
UBAP1-202ENST00000359544 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
UBAP1-202ENST00000359544 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
UBAP1-202ENST00000359544 IGLV5-37A0A075B6J1 123 aa9.54□□□□□ -0.88
UBAP1-202ENST00000359544 RPL37AP8A6NKH3 93 aa9.54□□□□□ -0.88
UBAP1-202ENST00000359544 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
UBAP1-202ENST00000359544 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
UBAP1-202ENST00000359544 MRPL55Q7Z7F7 128 aaKnown RBP9.54□□□□□ -0.88
UBAP1-202ENST00000359544 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
UBAP1-202ENST00000359544 H3BNG1 76 aa9.53□□□□□ -0.88
UBAP1-202ENST00000359544 WFDC13Q8IUB5 93 aa9.53□□□□□ -0.88
UBAP1-202ENST00000359544 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.88
UBAP1-202ENST00000359544 KTN1-AS1Q86SY8 53 aa9.52□□□□□ -0.88
UBAP1-202ENST00000359544 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.89
UBAP1-202ENST00000359544 LINC00588Q9Y4M8 146 aa9.51□□□□□ -0.89
UBAP1-202ENST00000359544 H0Y9P7 68 aa9.5□□□□□ -0.89
UBAP1-202ENST00000359544 PRR15LQ9BU68 103 aa9.5□□□□□ -0.89
UBAP1-202ENST00000359544 A8MU10 97 aa9.49□□□□□ -0.89
UBAP1-202ENST00000359544 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
UBAP1-202ENST00000359544 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
UBAP1-202ENST00000359544 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
UBAP1-202ENST00000359544 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
UBAP1-202ENST00000359544 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
UBAP1-202ENST00000359544 IGFL1Q6UW32 110 aa9.47□□□□□ -0.89
UBAP1-202ENST00000359544 Q75L30 129 aa9.47□□□□□ -0.89
UBAP1-202ENST00000359544 LINC01556Q5JQF7 62 aa9.46□□□□□ -0.89
UBAP1-202ENST00000359544 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
UBAP1-202ENST00000359544 DNAH7Q8WXX0 4024 aa9.45□□□□□ -0.9
UBAP1-202ENST00000359544 NDUFS5O43920 106 aa9.45□□□□□ -0.9
UBAP1-202ENST00000359544 CASC2Q6XLA1 102 aa9.44□□□□□ -0.9
UBAP1-202ENST00000359544 STARD9Q9P2P6 4700 aa9.43□□□□□ -0.9
UBAP1-202ENST00000359544 A0A087WSZ3 146 aa9.43□□□□□ -0.9
UBAP1-202ENST00000359544 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
UBAP1-202ENST00000359544 KMT2CQ8NEZ4 4911 aaKnown RBP9.43□□□□□ -0.9
UBAP1-202ENST00000359544 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
UBAP1-202ENST00000359544 WWC2-AS2Q96NR7 200 aa9.43□□□□□ -0.9
UBAP1-202ENST00000359544 IGLV8-61A0A075B6I0 122 aa9.42□□□□□ -0.9
UBAP1-202ENST00000359544 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
UBAP1-202ENST00000359544 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
UBAP1-202ENST00000359544 A6NED7 52 aa9.42□□□□□ -0.9
UBAP1-202ENST00000359544 TENM2Q9NT68 2774 aa9.42□□□□□ -0.9
UBAP1-202ENST00000359544 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
UBAP1-202ENST00000359544 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.91
UBAP1-202ENST00000359544 LCA10Q71F78 164 aa9.4□□□□□ -0.91
UBAP1-202ENST00000359544 COA5Q86WW8 74 aa9.39□□□□□ -0.91
UBAP1-202ENST00000359544 KRTAP7-1Q8IUC3 87 aa9.39□□□□□ -0.91
UBAP1-202ENST00000359544 A0A0G2JQZ4 141 aa9.39□□□□□ -0.91
UBAP1-202ENST00000359544 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
UBAP1-202ENST00000359544 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
UBAP1-202ENST00000359544 CNBPP62633 177 aaKnown RBP9.37□□□□□ -0.91
UBAP1-202ENST00000359544 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
UBAP1-202ENST00000359544 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
UBAP1-202ENST00000359544 A6NN06 94 aa9.36□□□□□ -0.91
UBAP1-202ENST00000359544 A8MWP4 228 aa9.36□□□□□ -0.91
UBAP1-202ENST00000359544 PLECQ15149 4684 aaKnown RBP9.34□□□□□ -0.91
UBAP1-202ENST00000359544 DNAH10OSP0CZ25 163 aa9.34□□□□□ -0.91
UBAP1-202ENST00000359544 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
UBAP1-202ENST00000359544 LYSTQ99698 3801 aa9.32□□□□□ -0.92
UBAP1-202ENST00000359544 RYR3Q15413 4870 aa9.32□□□□□ -0.92
UBAP1-202ENST00000359544 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
UBAP1-202ENST00000359544 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
UBAP1-202ENST00000359544 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
UBAP1-202ENST00000359544 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
UBAP1-202ENST00000359544 PRLHP81277 87 aa9.28□□□□□ -0.92
UBAP1-202ENST00000359544 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
UBAP1-202ENST00000359544 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
UBAP1-202ENST00000359544 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
UBAP1-202ENST00000359544 MMP24-AS1A0A0U1RRL7 71 aa9.26□□□□□ -0.93
UBAP1-202ENST00000359544 HYDINQ4G0P3 5121 aa9.25□□□□□ -0.93
UBAP1-202ENST00000359544 H0Y9J4 135 aa9.25□□□□□ -0.93
UBAP1-202ENST00000359544 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
UBAP1-202ENST00000359544 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
UBAP1-202ENST00000359544 MOBPQ13875 183 aa9.24□□□□□ -0.93
UBAP1-202ENST00000359544 SPRR1BP22528 89 aa9.23□□□□□ -0.93
UBAP1-202ENST00000359544 PCOTHQ58A44 107 aa9.23□□□□□ -0.93
UBAP1-202ENST00000359544 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
UBAP1-202ENST00000359544 RYR2Q92736 4967 aa9.21□□□□□ -0.93
UBAP1-202ENST00000359544 Q6ZR54 194 aa9.17□□□□□ -0.94
UBAP1-202ENST00000359544 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
UBAP1-202ENST00000359544 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
UBAP1-202ENST00000359544 DNAH1Q9P2D7 4330 aa9.15□□□□□ -0.94
UBAP1-202ENST00000359544 A0A096LNI7 61 aa9.15□□□□□ -0.94
UBAP1-202ENST00000359544 SPINK7P58062 85 aa9.14□□□□□ -0.95
UBAP1-202ENST00000359544 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
UBAP1-202ENST00000359544 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
UBAP1-202ENST00000359544 LY6G6CO95867 125 aa9.14□□□□□ -0.95
UBAP1-202ENST00000359544 HRES1P13985 223 aa9.13□□□□□ -0.95
UBAP1-202ENST00000359544 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
UBAP1-202ENST00000359544 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
UBAP1-202ENST00000359544 APLNQ9ULZ1 77 aa9.1□□□□□ -0.95
UBAP1-202ENST00000359544 C8orf17Q9NRJ1 99 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms