RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 A0A096LNI7 61 aa13.14□□□□□ -0.31
TRIM3-202ENST00000359518 PRR4Q16378 134 aa13.13□□□□□ -0.31
TRIM3-202ENST00000359518 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
TRIM3-202ENST00000359518 IGFL1Q6UW32 110 aa13.13□□□□□ -0.31
TRIM3-202ENST00000359518 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
TRIM3-202ENST00000359518 WFDC13Q8IUB5 93 aa13.12□□□□□ -0.31
TRIM3-202ENST00000359518 PSCAO43653 123 aa13.11□□□□□ -0.31
TRIM3-202ENST00000359518 A0A087WSZ3 146 aa13.11□□□□□ -0.31
TRIM3-202ENST00000359518 A0A1B0GW54 56 aa13.1□□□□□ -0.31
TRIM3-202ENST00000359518 RPL37AP61513 92 aaKnown RBP13.09□□□□□ -0.31
TRIM3-202ENST00000359518 KRTAP1-5Q9BYS1 174 aa13.09□□□□□ -0.31
TRIM3-202ENST00000359518 HUWE1Q7Z6Z7 4374 aaKnown RBP13.09□□□□□ -0.31
TRIM3-202ENST00000359518 HCG22E2RYF7 251 aa13.07□□□□□ -0.32
TRIM3-202ENST00000359518 COL7A1Q02388 2944 aa13.07□□□□□ -0.32
TRIM3-202ENST00000359518 CHTF8P0CG12 524 aa13.07□□□□□ -0.32
TRIM3-202ENST00000359518 DNAH3Q8TD57 4116 aa13.06□□□□□ -0.32
TRIM3-202ENST00000359518 KRTAP11-1Q8IUC1 163 aa13.03□□□□□ -0.32
TRIM3-202ENST00000359518 PHF5AQ7RTV0 110 aaKnown RBP13.02□□□□□ -0.33
TRIM3-202ENST00000359518 UBE2AP49459 152 aa13.01□□□□□ -0.33
TRIM3-202ENST00000359518 LCE6AA0A183 80 aa13.01□□□□□ -0.33
TRIM3-202ENST00000359518 K7EIL1 84 aa13.01□□□□□ -0.33
TRIM3-202ENST00000359518 C16orf90A8MZG2 172 aa13□□□□□ -0.33
TRIM3-202ENST00000359518 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
TRIM3-202ENST00000359518 C1orf64Q8NEQ6 169 aa12.99□□□□□ -0.33
TRIM3-202ENST00000359518 ZCCHC13Q8WW36 166 aaKnown RBP12.98□□□□□ -0.33
TRIM3-202ENST00000359518 hDV103S1A0JD37 113 aa12.96□□□□□ -0.33
TRIM3-202ENST00000359518 UBE2DNLQ8IWF7 75 aa12.94□□□□□ -0.34
TRIM3-202ENST00000359518 LINC00208Q96KT6 92 aa12.92□□□□□ -0.34
TRIM3-202ENST00000359518 CNBPP62633 177 aaKnown RBP12.88□□□□□ -0.35
TRIM3-202ENST00000359518 MP68P56378 58 aa12.87□□□□□ -0.35
TRIM3-202ENST00000359518 IGLV8-61A0A075B6I0 122 aa12.86□□□□□ -0.35
TRIM3-202ENST00000359518 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
TRIM3-202ENST00000359518 PSPHP1O15172 72 aa12.85□□□□□ -0.35
TRIM3-202ENST00000359518 CASC2Q6XLA1 102 aa12.85□□□□□ -0.35
TRIM3-202ENST00000359518 PANO1I0J062 215 aa12.82□□□□□ -0.36
TRIM3-202ENST00000359518 KRTAP29-1A8MX34 341 aaPredicted RBP12.81□□□□□ -0.36
TRIM3-202ENST00000359518 H0Y9J4 135 aa12.81□□□□□ -0.36
TRIM3-202ENST00000359518 H0Y9P7 68 aa12.8□□□□□ -0.36
TRIM3-202ENST00000359518 PRR15Q8IV56 129 aa12.8□□□□□ -0.36
TRIM3-202ENST00000359518 TRAV22A0A0B4J277 110 aa12.79□□□□□ -0.36
TRIM3-202ENST00000359518 LINC00472Q9H8W2 130 aa12.77□□□□□ -0.36
TRIM3-202ENST00000359518 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 A8MWP4 228 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 NDUFB1O75438 58 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 PMAIP1Q13794 54 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 B9D2Q9BPU9 175 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 APLNQ9ULZ1 77 aa12.75□□□□□ -0.37
TRIM3-202ENST00000359518 CYP4F30PQ9H0H9 118 aa12.74□□□□□ -0.37
TRIM3-202ENST00000359518 C9orf163Q8N9P6 203 aa12.73□□□□□ -0.37
TRIM3-202ENST00000359518 A8MU10 97 aa12.72□□□□□ -0.37
TRIM3-202ENST00000359518 C14orf177Q52M58 125 aa12.72□□□□□ -0.37
TRIM3-202ENST00000359518 SPRR1BP22528 89 aa12.72□□□□□ -0.37
TRIM3-202ENST00000359518 Q1T7F1 81 aa12.72□□□□□ -0.37
TRIM3-202ENST00000359518 PLECQ15149 4684 aaKnown RBP12.7□□□□□ -0.38
TRIM3-202ENST00000359518 A8MUN3 132 aa12.68□□□□□ -0.38
TRIM3-202ENST00000359518 MDFIQ99750 246 aa12.67□□□□□ -0.38
TRIM3-202ENST00000359518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.66□□□□□ -0.38
TRIM3-202ENST00000359518 MMP24-AS1A0A0U1RRL7 71 aa12.64□□□□□ -0.39
TRIM3-202ENST00000359518 PCOTHQ58A44 107 aa12.63□□□□□ -0.39
TRIM3-202ENST00000359518 NBDYA0A0U1RRE5 68 aa12.62□□□□□ -0.39
TRIM3-202ENST00000359518 ANAPC11Q9NYG5 84 aa12.62□□□□□ -0.39
TRIM3-202ENST00000359518 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
TRIM3-202ENST00000359518 NDUFS5O43920 106 aa12.56□□□□□ -0.4
TRIM3-202ENST00000359518 IGHV6-1A0A0B4J1U7 121 aa12.56□□□□□ -0.4
TRIM3-202ENST00000359518 Q96NJ1 140 aa12.56□□□□□ -0.4
TRIM3-202ENST00000359518 MOBPQ13875 183 aa12.55□□□□□ -0.4
TRIM3-202ENST00000359518 H3BPC8 53 aa12.55□□□□□ -0.4
TRIM3-202ENST00000359518 Q6ZRN7 208 aaPredicted RBP12.55□□□□□ -0.4
TRIM3-202ENST00000359518 SPANXA2-OT1Q8N9U9 137 aa12.54□□□□□ -0.4
TRIM3-202ENST00000359518 TGP01266 2768 aa12.54□□□□□ -0.4
TRIM3-202ENST00000359518 FRAS1Q86XX4 4008 aa12.54□□□□□ -0.4
TRIM3-202ENST00000359518 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
TRIM3-202ENST00000359518 Q8N9P0 234 aaPredicted RBP12.51□□□□□ -0.41
TRIM3-202ENST00000359518 Q5VV11 94 aa12.5□□□□□ -0.41
TRIM3-202ENST00000359518 PRR15LQ9BU68 103 aa12.49□□□□□ -0.41
TRIM3-202ENST00000359518 C8orf17Q9NRJ1 99 aa12.49□□□□□ -0.41
TRIM3-202ENST00000359518 SPTSSBQ8NFR3 76 aa12.48□□□□□ -0.41
TRIM3-202ENST00000359518 COA5Q86WW8 74 aa12.48□□□□□ -0.41
TRIM3-202ENST00000359518 CHKB-CPT1BH3BT56 60 aa12.48□□□□□ -0.41
TRIM3-202ENST00000359518 A0A087X002 238 aa12.47□□□□□ -0.41
TRIM3-202ENST00000359518 NOTCH2NLQ7Z3S9 236 aa12.47□□□□□ -0.41
TRIM3-202ENST00000359518 CD164Q04900 197 aa12.47□□□□□ -0.41
TRIM3-202ENST00000359518 PSORS1C2Q9UIG4 136 aa12.47□□□□□ -0.41
TRIM3-202ENST00000359518 STARD9Q9P2P6 4700 aa12.46□□□□□ -0.41
TRIM3-202ENST00000359518 DYNC2H1Q8NCM8 4307 aaKnown RBP12.45□□□□□ -0.42
TRIM3-202ENST00000359518 CDK2AP2O75956 126 aa12.43□□□□□ -0.42
TRIM3-202ENST00000359518 SPINK6Q6UWN8 80 aa12.43□□□□□ -0.42
TRIM3-202ENST00000359518 WWC2-AS2Q96NR7 200 aa12.43□□□□□ -0.42
TRIM3-202ENST00000359518 IGLV7-46A0A075B6I9 117 aa12.43□□□□□ -0.42
TRIM3-202ENST00000359518 A0A087WTM6 91 aa12.42□□□□□ -0.42
TRIM3-202ENST00000359518 DNAH8Q96JB1 4490 aa12.42□□□□□ -0.42
TRIM3-202ENST00000359518 A0A1B0GVX0 72 aa12.41□□□□□ -0.42
TRIM3-202ENST00000359518 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
TRIM3-202ENST00000359518 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
TRIM3-202ENST00000359518 RTL8CO15255 209 aa12.39□□□□□ -0.43
TRIM3-202ENST00000359518 NUPR2A6NF83 97 aa12.39□□□□□ -0.43
TRIM3-202ENST00000359518 LINC00483Q53H64 154 aa12.38□□□□□ -0.43
TRIM3-202ENST00000359518 LIMD2Q9BT23 127 aa12.38□□□□□ -0.43
TRIM3-202ENST00000359518 DNHD1Q96M86 4753 aa12.38□□□□□ -0.43
TRIM3-202ENST00000359518 TP53AIP1Q9HCN2 124 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms