RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
TRAPPC4-201ENST00000359005 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
TRAPPC4-201ENST00000359005 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
TRAPPC4-201ENST00000359005 PRLHP81277 87 aa6.69□□□□□ -1.34
TRAPPC4-201ENST00000359005 Q6ZQT0 140 aa6.69□□□□□ -1.34
TRAPPC4-201ENST00000359005 Q8N1X5 172 aa6.69□□□□□ -1.34
TRAPPC4-201ENST00000359005 Q8N377 158 aa6.69□□□□□ -1.34
TRAPPC4-201ENST00000359005 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
TRAPPC4-201ENST00000359005 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
TRAPPC4-201ENST00000359005 SCGB1A1P11684 91 aa6.68□□□□□ -1.34
TRAPPC4-201ENST00000359005 HAMPP81172 84 aa6.68□□□□□ -1.34
TRAPPC4-201ENST00000359005 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
TRAPPC4-201ENST00000359005 A0A1B0GV72 72 aa6.67□□□□□ -1.34
TRAPPC4-201ENST00000359005 PANO1I0J062 215 aa6.67□□□□□ -1.34
TRAPPC4-201ENST00000359005 IMUPQ9GZP8 106 aa6.67□□□□□ -1.34
TRAPPC4-201ENST00000359005 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC4-201ENST00000359005 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
TRAPPC4-201ENST00000359005 SPRR1BP22528 89 aa6.66□□□□□ -1.34
TRAPPC4-201ENST00000359005 Q6JHZ5 121 aa6.66□□□□□ -1.34
TRAPPC4-201ENST00000359005 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC4-201ENST00000359005 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
TRAPPC4-201ENST00000359005 FAM30AQ9NZY2 134 aa6.65□□□□□ -1.34
TRAPPC4-201ENST00000359005 ZNF861PO60384 105 aa6.64□□□□□ -1.35
TRAPPC4-201ENST00000359005 Q6Q795 121 aa6.64□□□□□ -1.35
TRAPPC4-201ENST00000359005 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
TRAPPC4-201ENST00000359005 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
TRAPPC4-201ENST00000359005 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
TRAPPC4-201ENST00000359005 SMR3BP02814 79 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC4-201ENST00000359005 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
TRAPPC4-201ENST00000359005 Q6ZSA8 131 aa6.63□□□□□ -1.35
TRAPPC4-201ENST00000359005 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
TRAPPC4-201ENST00000359005 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
TRAPPC4-201ENST00000359005 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
TRAPPC4-201ENST00000359005 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
TRAPPC4-201ENST00000359005 LINC00846Q9NV44 126 aa6.61□□□□□ -1.35
TRAPPC4-201ENST00000359005 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC4-201ENST00000359005 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
TRAPPC4-201ENST00000359005 MT-ATP8P03928 68 aa6.6□□□□□ -1.35
TRAPPC4-201ENST00000359005 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
TRAPPC4-201ENST00000359005 KRTAP11-1Q8IUC1 163 aa6.6□□□□□ -1.35
TRAPPC4-201ENST00000359005 NREPQ16612 68 aa6.59□□□□□ -1.35
TRAPPC4-201ENST00000359005 SCXQ7RTU7 201 aa6.59□□□□□ -1.35
TRAPPC4-201ENST00000359005 Q8NBF4 154 aa6.59□□□□□ -1.35
TRAPPC4-201ENST00000359005 Q5VSD8 79 aa6.58□□□□□ -1.36
TRAPPC4-201ENST00000359005 SMIM29Q86T20 159 aa6.58□□□□□ -1.36
TRAPPC4-201ENST00000359005 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
TRAPPC4-201ENST00000359005 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
TRAPPC4-201ENST00000359005 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
TRAPPC4-201ENST00000359005 CXCL6P80162 114 aa6.57□□□□□ -1.36
TRAPPC4-201ENST00000359005 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
TRAPPC4-201ENST00000359005 CRYGAP11844 174 aa6.56□□□□□ -1.36
TRAPPC4-201ENST00000359005 Q6ZVQ6 151 aa6.55□□□□□ -1.36
TRAPPC4-201ENST00000359005 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
TRAPPC4-201ENST00000359005 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
TRAPPC4-201ENST00000359005 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.36
TRAPPC4-201ENST00000359005 A0A1W2PNM2 257 aa6.52□□□□□ -1.37
TRAPPC4-201ENST00000359005 SS18L2Q9UHA2 77 aa6.52□□□□□ -1.37
TRAPPC4-201ENST00000359005 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
TRAPPC4-201ENST00000359005 BPY2O14599 106 aa6.51□□□□□ -1.37
TRAPPC4-201ENST00000359005 PCP4P48539 62 aa6.51□□□□□ -1.37
TRAPPC4-201ENST00000359005 HIST1H4AP62805 103 aaKnown RBP6.51□□□□□ -1.37
TRAPPC4-201ENST00000359005 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
TRAPPC4-201ENST00000359005 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
TRAPPC4-201ENST00000359005 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC4-201ENST00000359005 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
TRAPPC4-201ENST00000359005 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
TRAPPC4-201ENST00000359005 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 J3KT08 172 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 ATOX1O00244 68 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 CD164Q04900 197 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
TRAPPC4-201ENST00000359005 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
TRAPPC4-201ENST00000359005 A0A087WSZ3 146 aa6.45□□□□□ -1.38
TRAPPC4-201ENST00000359005 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
TRAPPC4-201ENST00000359005 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
TRAPPC4-201ENST00000359005 MOBPQ13875 183 aa6.45□□□□□ -1.38
TRAPPC4-201ENST00000359005 TNXBP22105 4242 aa6.42□□□□□ -1.38
TRAPPC4-201ENST00000359005 NDUFB1O75438 58 aa6.42□□□□□ -1.38
TRAPPC4-201ENST00000359005 PLA2G1BP04054 148 aaKnown RBP6.42□□□□□ -1.38
TRAPPC4-201ENST00000359005 C4orf48Q5BLP8 95 aa6.4□□□□□ -1.38
TRAPPC4-201ENST00000359005 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
TRAPPC4-201ENST00000359005 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
TRAPPC4-201ENST00000359005 A0A087WVE0 104 aa6.37□□□□□ -1.39
TRAPPC4-201ENST00000359005 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC4-201ENST00000359005 J3QL48 77 aa6.36□□□□□ -1.39
TRAPPC4-201ENST00000359005 IGKV4-1P06312 121 aa6.36□□□□□ -1.39
TRAPPC4-201ENST00000359005 ANAPC11Q9NYG5 84 aa6.36□□□□□ -1.39
TRAPPC4-201ENST00000359005 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 A8MWP4 228 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 HRCT1Q6UXD1 115 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 TYMSOSQ8TAI1 123 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
TRAPPC4-201ENST00000359005 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
TRAPPC4-201ENST00000359005 UQCRQO14949 82 aa6.33□□□□□ -1.4
TRAPPC4-201ENST00000359005 DSCR10P59022 87 aa6.33□□□□□ -1.4
TRAPPC4-201ENST00000359005 Q5XG85 94 aa6.33□□□□□ -1.4
TRAPPC4-201ENST00000359005 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms