RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
CDK11A-204ENST00000358779 LYSTQ99698 3801 aa11.12□□□□□ -0.63
CDK11A-204ENST00000358779 HCG22E2RYF7 251 aa11.11□□□□□ -0.63
CDK11A-204ENST00000358779 UBE2AP49459 152 aa11.11□□□□□ -0.63
CDK11A-204ENST00000358779 FP248Q71RG6 208 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-204ENST00000358779 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
CDK11A-204ENST00000358779 A0A087WSZ3 146 aa11.11□□□□□ -0.63
CDK11A-204ENST00000358779 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
CDK11A-204ENST00000358779 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
CDK11A-204ENST00000358779 H0Y9J4 135 aa11.06□□□□□ -0.64
CDK11A-204ENST00000358779 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
CDK11A-204ENST00000358779 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
CDK11A-204ENST00000358779 SPRR1BP22528 89 aa11.05□□□□□ -0.64
CDK11A-204ENST00000358779 ZCCHC13Q8WW36 166 aaKnown RBP11.05□□□□□ -0.64
CDK11A-204ENST00000358779 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
CDK11A-204ENST00000358779 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
CDK11A-204ENST00000358779 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
CDK11A-204ENST00000358779 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.64
CDK11A-204ENST00000358779 LRCOL1A6NCL2 159 aa11.02□□□□□ -0.65
CDK11A-204ENST00000358779 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
CDK11A-204ENST00000358779 RPL37AP61513 92 aaKnown RBP11.01□□□□□ -0.65
CDK11A-204ENST00000358779 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
CDK11A-204ENST00000358779 DYNC2H1Q8NCM8 4307 aaKnown RBP11□□□□□ -0.65
CDK11A-204ENST00000358779 B9D2Q9BPU9 175 aa10.99□□□□□ -0.65
CDK11A-204ENST00000358779 NBDYA0A0U1RRE5 68 aa10.98□□□□□ -0.65
CDK11A-204ENST00000358779 PANO1I0J062 215 aa10.96□□□□□ -0.65
CDK11A-204ENST00000358779 KRTAP29-1A8MX34 341 aaPredicted RBP10.95□□□□□ -0.66
CDK11A-204ENST00000358779 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
CDK11A-204ENST00000358779 DNAH7Q8WXX0 4024 aa10.94□□□□□ -0.66
CDK11A-204ENST00000358779 LINC00336Q6ZUF6 198 aa10.94□□□□□ -0.66
CDK11A-204ENST00000358779 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
CDK11A-204ENST00000358779 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
CDK11A-204ENST00000358779 LINC00472Q9H8W2 130 aa10.93□□□□□ -0.66
CDK11A-204ENST00000358779 hDV103S1A0JD37 113 aa10.93□□□□□ -0.66
CDK11A-204ENST00000358779 MDFIQ99750 246 aa10.93□□□□□ -0.66
CDK11A-204ENST00000358779 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
CDK11A-204ENST00000358779 A8MWP4 228 aa10.92□□□□□ -0.66
CDK11A-204ENST00000358779 CASC2Q6XLA1 102 aa10.92□□□□□ -0.66
CDK11A-204ENST00000358779 MP68P56378 58 aa10.91□□□□□ -0.66
CDK11A-204ENST00000358779 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
CDK11A-204ENST00000358779 NUPR2A6NF83 97 aa10.9□□□□□ -0.66
CDK11A-204ENST00000358779 SRRM2Q9UQ35 2752 aaKnown RBP10.9□□□□□ -0.66
CDK11A-204ENST00000358779 C1orf64Q8NEQ6 169 aa10.89□□□□□ -0.67
CDK11A-204ENST00000358779 NDUFB1O75438 58 aa10.87□□□□□ -0.67
CDK11A-204ENST00000358779 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
CDK11A-204ENST00000358779 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
CDK11A-204ENST00000358779 CYP4F30PQ9H0H9 118 aa10.87□□□□□ -0.67
CDK11A-204ENST00000358779 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.87□□□□□ -0.67
CDK11A-204ENST00000358779 TRAV22A0A0B4J277 110 aa10.86□□□□□ -0.67
CDK11A-204ENST00000358779 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
CDK11A-204ENST00000358779 TENM2Q9NT68 2774 aa10.85□□□□□ -0.67
CDK11A-204ENST00000358779 PRO0628Q9UI54 55 aa10.85□□□□□ -0.67
CDK11A-204ENST00000358779 PRR4Q16378 134 aa10.85□□□□□ -0.67
CDK11A-204ENST00000358779 H0Y9P7 68 aa10.84□□□□□ -0.67
CDK11A-204ENST00000358779 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
CDK11A-204ENST00000358779 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
CDK11A-204ENST00000358779 H3BPC8 53 aa10.81□□□□□ -0.68
CDK11A-204ENST00000358779 A0A087WTM6 91 aa10.78□□□□□ -0.68
CDK11A-204ENST00000358779 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
CDK11A-204ENST00000358779 Q96NJ1 140 aa10.77□□□□□ -0.68
CDK11A-204ENST00000358779 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
CDK11A-204ENST00000358779 BRK1Q8WUW1 75 aa10.75□□□□□ -0.69
CDK11A-204ENST00000358779 Q1T7F1 81 aa10.75□□□□□ -0.69
CDK11A-204ENST00000358779 SPANXA2-OT1Q8N9U9 137 aa10.74□□□□□ -0.69
CDK11A-204ENST00000358779 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
CDK11A-204ENST00000358779 RTL8CO15255 209 aa10.73□□□□□ -0.69
CDK11A-204ENST00000358779 VPS13DQ5THJ4 4388 aa10.73□□□□□ -0.69
CDK11A-204ENST00000358779 STARD9Q9P2P6 4700 aa10.73□□□□□ -0.69
CDK11A-204ENST00000358779 V9GYY9 64 aa10.73□□□□□ -0.69
CDK11A-204ENST00000358779 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
CDK11A-204ENST00000358779 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
CDK11A-204ENST00000358779 MOBPQ13875 183 aa10.71□□□□□ -0.69
CDK11A-204ENST00000358779 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.69
CDK11A-204ENST00000358779 ASB16-AS1Q495Z4 193 aa10.69□□□□□ -0.7
CDK11A-204ENST00000358779 HECTD4Q9Y4D8 3996 aa10.67□□□□□ -0.7
CDK11A-204ENST00000358779 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
CDK11A-204ENST00000358779 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
CDK11A-204ENST00000358779 ZNF861PO60384 105 aa10.65□□□□□ -0.71
CDK11A-204ENST00000358779 Q6ZR54 194 aa10.65□□□□□ -0.71
CDK11A-204ENST00000358779 ANAPC11Q9NYG5 84 aa10.65□□□□□ -0.71
CDK11A-204ENST00000358779 TP53AIP1Q9HCN2 124 aa10.64□□□□□ -0.71
CDK11A-204ENST00000358779 A0A1B0GVX0 72 aa10.64□□□□□ -0.71
CDK11A-204ENST00000358779 PRKDCP78527 4128 aaKnown RBP10.63□□□□□ -0.71
CDK11A-204ENST00000358779 IGHV6-1A0A0B4J1U7 121 aa10.63□□□□□ -0.71
CDK11A-204ENST00000358779 PSPHP1O15172 72 aa10.62□□□□□ -0.71
CDK11A-204ENST00000358779 CDK2AP2O75956 126 aa10.6□□□□□ -0.71
CDK11A-204ENST00000358779 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
CDK11A-204ENST00000358779 NDUFS5O43920 106 aa10.57□□□□□ -0.72
CDK11A-204ENST00000358779 DNAH8Q96JB1 4490 aa10.57□□□□□ -0.72
CDK11A-204ENST00000358779 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
CDK11A-204ENST00000358779 PCOTHQ58A44 107 aa10.56□□□□□ -0.72
CDK11A-204ENST00000358779 FRAS1Q86XX4 4008 aa10.56□□□□□ -0.72
CDK11A-204ENST00000358779 MRPL34Q9BQ48 92 aaKnown RBP10.55□□□□□ -0.72
CDK11A-204ENST00000358779 KMT2AQ03164 3969 aa10.55□□□□□ -0.72
CDK11A-204ENST00000358779 A8MUN3 132 aa10.54□□□□□ -0.72
CDK11A-204ENST00000358779 CD164Q04900 197 aa10.54□□□□□ -0.72
CDK11A-204ENST00000358779 C1orf134Q5TEV5 83 aa10.54□□□□□ -0.72
CDK11A-204ENST00000358779 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
CDK11A-204ENST00000358779 A0A087X002 238 aa10.53□□□□□ -0.72
CDK11A-204ENST00000358779 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms