RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CMC4P56277 68 aaPredicted RBP6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 KIAA0087Q14695 138 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 CLPSL2Q6UWE3 100 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 H3BQ85 93 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 ELOF1P60002 83 aaKnown RBP6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 HIGD2BQ4VC39 106 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 CASC10Q5T4H9 136 aa6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 PLECQ15149 4684 aaKnown RBP6.07□□□□□ -1.44
SMARCAL1-202ENST00000358207 GYPEP15421 78 aa6.06□□□□□ -1.44
SMARCAL1-202ENST00000358207 Q9BRP9 147 aa6.05□□□□□ -1.44
SMARCAL1-202ENST00000358207 NDUFB1O75438 58 aa6.05□□□□□ -1.44
SMARCAL1-202ENST00000358207 SPINK7P58062 85 aa6.05□□□□□ -1.44
SMARCAL1-202ENST00000358207 COX17Q14061 63 aa6.05□□□□□ -1.44
SMARCAL1-202ENST00000358207 DSCR10P59022 87 aa6.04□□□□□ -1.44
SMARCAL1-202ENST00000358207 STARD9Q9P2P6 4700 aa6.03□□□□□ -1.44
SMARCAL1-202ENST00000358207 K7EQZ3 153 aa6.03□□□□□ -1.44
SMARCAL1-202ENST00000358207 Q8NAQ8 132 aa6.03□□□□□ -1.44
SMARCAL1-202ENST00000358207 A0A0J9YWU9 116 aa6.02□□□□□ -1.44
SMARCAL1-202ENST00000358207 DEFB116Q30KQ4 102 aa6.02□□□□□ -1.45
SMARCAL1-202ENST00000358207 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
SMARCAL1-202ENST00000358207 KCNQ1DNQ9H478 68 aa6.01□□□□□ -1.45
SMARCAL1-202ENST00000358207 DNAH17Q9UFH2 4485 aa6□□□□□ -1.45
SMARCAL1-202ENST00000358207 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
SMARCAL1-202ENST00000358207 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
SMARCAL1-202ENST00000358207 IGLV10-54A0A075B6I4 117 aa6□□□□□ -1.45
SMARCAL1-202ENST00000358207 COA5Q86WW8 74 aa6□□□□□ -1.45
SMARCAL1-202ENST00000358207 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
SMARCAL1-202ENST00000358207 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
SMARCAL1-202ENST00000358207 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
SMARCAL1-202ENST00000358207 SPART-AS1P0CW21 52 aa5.99□□□□□ -1.45
SMARCAL1-202ENST00000358207 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
SMARCAL1-202ENST00000358207 PRO0255Q9UI72 69 aa5.98□□□□□ -1.45
SMARCAL1-202ENST00000358207 VPREB1P12018 145 aa5.97□□□□□ -1.45
SMARCAL1-202ENST00000358207 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
SMARCAL1-202ENST00000358207 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
SMARCAL1-202ENST00000358207 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.45
SMARCAL1-202ENST00000358207 MP68P56378 58 aa5.96□□□□□ -1.45
SMARCAL1-202ENST00000358207 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
SMARCAL1-202ENST00000358207 XAGE1AQ9HD64 81 aa5.96□□□□□ -1.46
SMARCAL1-202ENST00000358207 SPAG11BQ08648 103 aa5.95□□□□□ -1.46
SMARCAL1-202ENST00000358207 C9orf163Q8N9P6 203 aa5.95□□□□□ -1.46
SMARCAL1-202ENST00000358207 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 Q8N377 158 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 DEFB105AQ8NG35 78 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 FRAS1Q86XX4 4008 aa5.94□□□□□ -1.46
SMARCAL1-202ENST00000358207 ANGP03950 147 aaKnown RBP5.93□□□□□ -1.46
SMARCAL1-202ENST00000358207 LINC00476Q8WZB0 136 aa5.93□□□□□ -1.46
SMARCAL1-202ENST00000358207 DEFB131BA0A096LNP1 70 aa5.93□□□□□ -1.46
SMARCAL1-202ENST00000358207 NUPR2A6NF83 97 aa5.92□□□□□ -1.46
SMARCAL1-202ENST00000358207 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
SMARCAL1-202ENST00000358207 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
SMARCAL1-202ENST00000358207 IGKV2D-24A0A075B6R9 120 aa5.92□□□□□ -1.46
SMARCAL1-202ENST00000358207 H0Y9P7 68 aa5.92□□□□□ -1.46
SMARCAL1-202ENST00000358207 HYDINQ4G0P3 5121 aa5.91□□□□□ -1.46
SMARCAL1-202ENST00000358207 WFDC10BQ8IUB3 73 aa5.91□□□□□ -1.46
SMARCAL1-202ENST00000358207 A0A1B0GUV1 79 aa5.9□□□□□ -1.46
SMARCAL1-202ENST00000358207 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
SMARCAL1-202ENST00000358207 Q8NBF4 154 aa5.89□□□□□ -1.47
SMARCAL1-202ENST00000358207 HERC2O95714 4834 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 IGLV1-50A0A075B6I6 118 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 DYNC1H1Q14204 4646 aaKnown RBP5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 RTL8CO15255 209 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
SMARCAL1-202ENST00000358207 A0A1B0GW54 56 aa5.87□□□□□ -1.47
SMARCAL1-202ENST00000358207 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
SMARCAL1-202ENST00000358207 TNP2Q05952 138 aa5.87□□□□□ -1.47
SMARCAL1-202ENST00000358207 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
SMARCAL1-202ENST00000358207 REG3AQ06141 175 aa5.86□□□□□ -1.47
SMARCAL1-202ENST00000358207 ZNF706Q9Y5V0 76 aaPredicted RBP5.86□□□□□ -1.47
SMARCAL1-202ENST00000358207 FAT2Q9NYQ8 4349 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 H3BPC8 53 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 A0A0G2JQZ4 141 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 A0A1W2PNN7 141 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 Q6ZR54 194 aa5.85□□□□□ -1.47
SMARCAL1-202ENST00000358207 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
SMARCAL1-202ENST00000358207 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
SMARCAL1-202ENST00000358207 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
SMARCAL1-202ENST00000358207 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
SMARCAL1-202ENST00000358207 LELP1Q5T871 98 aa5.82□□□□□ -1.48
SMARCAL1-202ENST00000358207 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
SMARCAL1-202ENST00000358207 H0Y9J4 135 aa5.81□□□□□ -1.48
SMARCAL1-202ENST00000358207 HRES1P13985 223 aa5.81□□□□□ -1.48
SMARCAL1-202ENST00000358207 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
SMARCAL1-202ENST00000358207 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
SMARCAL1-202ENST00000358207 APLNQ9ULZ1 77 aa5.79□□□□□ -1.48
SMARCAL1-202ENST00000358207 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
SMARCAL1-202ENST00000358207 A0A1B0GVY2 172 aa5.78□□□□□ -1.48
SMARCAL1-202ENST00000358207 C1orf134Q5TEV5 83 aa5.78□□□□□ -1.48
SMARCAL1-202ENST00000358207 PKD1P98161 4303 aa5.77□□□□□ -1.49
SMARCAL1-202ENST00000358207 UBE2DNLQ8IWF7 75 aa5.77□□□□□ -1.49
SMARCAL1-202ENST00000358207 A0A087X002 238 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms