RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
PTBP1-203ENST00000356948 Q6ZRX8 168 aa9.74□□□□□ -0.85
PTBP1-203ENST00000356948 A6NED7 52 aa9.73□□□□□ -0.85
PTBP1-203ENST00000356948 MP68P56378 58 aa9.73□□□□□ -0.85
PTBP1-203ENST00000356948 PRR15LQ9BU68 103 aa9.73□□□□□ -0.85
PTBP1-203ENST00000356948 A0A096LNI7 61 aa9.73□□□□□ -0.85
PTBP1-203ENST00000356948 ETDCA0A1B0GVM5 59 aa9.73□□□□□ -0.85
PTBP1-203ENST00000356948 K7EIL1 84 aa9.72□□□□□ -0.85
PTBP1-203ENST00000356948 C1orf137Q5JT78 98 aa9.71□□□□□ -0.85
PTBP1-203ENST00000356948 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
PTBP1-203ENST00000356948 PRLHP81277 87 aa9.7□□□□□ -0.86
PTBP1-203ENST00000356948 H3BQ85 93 aa9.7□□□□□ -0.86
PTBP1-203ENST00000356948 hDV103S1A0JD37 113 aa9.69□□□□□ -0.86
PTBP1-203ENST00000356948 K7EQZ3 153 aa9.69□□□□□ -0.86
PTBP1-203ENST00000356948 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
PTBP1-203ENST00000356948 CHTF8P0CG12 524 aa9.68□□□□□ -0.86
PTBP1-203ENST00000356948 IGLV5-48A0A075B6I7 105 aa9.67□□□□□ -0.86
PTBP1-203ENST00000356948 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
PTBP1-203ENST00000356948 SPRR1AP35321 89 aa9.65□□□□□ -0.86
PTBP1-203ENST00000356948 FRAS1Q86XX4 4008 aa9.65□□□□□ -0.87
PTBP1-203ENST00000356948 TNP2Q05952 138 aa9.64□□□□□ -0.87
PTBP1-203ENST00000356948 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
PTBP1-203ENST00000356948 DHRS4-AS1Q9P1J3 65 aa9.62□□□□□ -0.87
PTBP1-203ENST00000356948 STARD9Q9P2P6 4700 aa9.61□□□□□ -0.87
PTBP1-203ENST00000356948 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 PRR15Q8IV56 129 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 A0A087WSZ3 146 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 DSCR10P59022 87 aa9.6□□□□□ -0.87
PTBP1-203ENST00000356948 LINC00476Q8WZB0 136 aa9.59□□□□□ -0.87
PTBP1-203ENST00000356948 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
PTBP1-203ENST00000356948 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
PTBP1-203ENST00000356948 HCG22E2RYF7 251 aa9.59□□□□□ -0.87
PTBP1-203ENST00000356948 PSCAO43653 123 aa9.58□□□□□ -0.88
PTBP1-203ENST00000356948 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
PTBP1-203ENST00000356948 Q8NBF4 154 aa9.58□□□□□ -0.88
PTBP1-203ENST00000356948 H0Y9J4 135 aa9.58□□□□□ -0.88
PTBP1-203ENST00000356948 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
PTBP1-203ENST00000356948 PANO1I0J062 215 aa9.56□□□□□ -0.88
PTBP1-203ENST00000356948 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
PTBP1-203ENST00000356948 NDUFS5O43920 106 aa9.55□□□□□ -0.88
PTBP1-203ENST00000356948 UBE2AP49459 152 aa9.55□□□□□ -0.88
PTBP1-203ENST00000356948 IGFL1Q6UW32 110 aa9.55□□□□□ -0.88
PTBP1-203ENST00000356948 NDUFB1O75438 58 aa9.54□□□□□ -0.88
PTBP1-203ENST00000356948 H0Y9P7 68 aa9.53□□□□□ -0.88
PTBP1-203ENST00000356948 CD164Q04900 197 aa9.53□□□□□ -0.88
PTBP1-203ENST00000356948 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
PTBP1-203ENST00000356948 Q1T7F1 81 aa9.53□□□□□ -0.88
PTBP1-203ENST00000356948 TGP01266 2768 aa9.52□□□□□ -0.89
PTBP1-203ENST00000356948 SPRR4Q96PI1 79 aa9.51□□□□□ -0.89
PTBP1-203ENST00000356948 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
PTBP1-203ENST00000356948 UBE2DNLQ8IWF7 75 aa9.49□□□□□ -0.89
PTBP1-203ENST00000356948 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
PTBP1-203ENST00000356948 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
PTBP1-203ENST00000356948 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
PTBP1-203ENST00000356948 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
PTBP1-203ENST00000356948 Q5VV11 94 aa9.46□□□□□ -0.89
PTBP1-203ENST00000356948 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.89
PTBP1-203ENST00000356948 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
PTBP1-203ENST00000356948 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
PTBP1-203ENST00000356948 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
PTBP1-203ENST00000356948 FBN3Q75N90 2809 aa9.44□□□□□ -0.9
PTBP1-203ENST00000356948 MDFIQ99750 246 aa9.43□□□□□ -0.9
PTBP1-203ENST00000356948 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
PTBP1-203ENST00000356948 MEGF8Q7Z7M0 2845 aa9.43□□□□□ -0.9
PTBP1-203ENST00000356948 KTN1-AS1Q86SY8 53 aa9.43□□□□□ -0.9
PTBP1-203ENST00000356948 DNAH17Q9UFH2 4485 aa9.42□□□□□ -0.9
PTBP1-203ENST00000356948 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
PTBP1-203ENST00000356948 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
PTBP1-203ENST00000356948 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
PTBP1-203ENST00000356948 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
PTBP1-203ENST00000356948 COA5Q86WW8 74 aa9.38□□□□□ -0.91
PTBP1-203ENST00000356948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
PTBP1-203ENST00000356948 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
PTBP1-203ENST00000356948 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
PTBP1-203ENST00000356948 LCA10Q71F78 164 aa9.34□□□□□ -0.91
PTBP1-203ENST00000356948 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
PTBP1-203ENST00000356948 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
PTBP1-203ENST00000356948 LCE6AA0A183 80 aa9.33□□□□□ -0.92
PTBP1-203ENST00000356948 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
PTBP1-203ENST00000356948 ATP11AUNQ6ZP68 121 aa9.32□□□□□ -0.92
PTBP1-203ENST00000356948 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
PTBP1-203ENST00000356948 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
PTBP1-203ENST00000356948 PRAC1Q96KF2 57 aa9.31□□□□□ -0.92
PTBP1-203ENST00000356948 A0A1B0GW54 56 aa9.3□□□□□ -0.92
PTBP1-203ENST00000356948 IGLV8-61A0A075B6I0 122 aa9.3□□□□□ -0.92
PTBP1-203ENST00000356948 CDK2AP2O75956 126 aa9.29□□□□□ -0.92
PTBP1-203ENST00000356948 LOC101927531A0A1B0GV80 90 aa9.28□□□□□ -0.92
PTBP1-203ENST00000356948 KRTAP29-1A8MX34 341 aaPredicted RBP9.27□□□□□ -0.93
PTBP1-203ENST00000356948 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
PTBP1-203ENST00000356948 IGHV6-1A0A0B4J1U7 121 aa9.25□□□□□ -0.93
PTBP1-203ENST00000356948 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
PTBP1-203ENST00000356948 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
PTBP1-203ENST00000356948 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
PTBP1-203ENST00000356948 SPINK7P58062 85 aa9.23□□□□□ -0.93
PTBP1-203ENST00000356948 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
PTBP1-203ENST00000356948 ALMS1Q8TCU4 4167 aa9.22□□□□□ -0.93
PTBP1-203ENST00000356948 PRR26Q8N8Z3 221 aa9.22□□□□□ -0.93
PTBP1-203ENST00000356948 SPRR1BP22528 89 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms