RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 H0Y9J4 135 aa11.4□□□□□ -0.58
SPNS3-201ENST00000355530 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.39□□□□□ -0.59
SPNS3-201ENST00000355530 SPRR1BP22528 89 aa11.38□□□□□ -0.59
SPNS3-201ENST00000355530 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
SPNS3-201ENST00000355530 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
SPNS3-201ENST00000355530 CHTF8P0CG12 524 aa11.36□□□□□ -0.59
SPNS3-201ENST00000355530 DEFB116Q30KQ4 102 aa11.36□□□□□ -0.59
SPNS3-201ENST00000355530 APLNQ9ULZ1 77 aa11.36□□□□□ -0.59
SPNS3-201ENST00000355530 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
SPNS3-201ENST00000355530 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
SPNS3-201ENST00000355530 COL6A5A8TX70 2615 aa11.35□□□□□ -0.59
SPNS3-201ENST00000355530 LINC00336Q6ZUF6 198 aa11.35□□□□□ -0.59
SPNS3-201ENST00000355530 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
SPNS3-201ENST00000355530 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
SPNS3-201ENST00000355530 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
SPNS3-201ENST00000355530 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
SPNS3-201ENST00000355530 PRO0628Q9UI54 55 aa11.32□□□□□ -0.6
SPNS3-201ENST00000355530 STAB2Q8WWQ8 2551 aa11.31□□□□□ -0.6
SPNS3-201ENST00000355530 LYSTQ99698 3801 aa11.3□□□□□ -0.6
SPNS3-201ENST00000355530 B9D2Q9BPU9 175 aa11.3□□□□□ -0.6
SPNS3-201ENST00000355530 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
SPNS3-201ENST00000355530 NDUFB1O75438 58 aa11.29□□□□□ -0.6
SPNS3-201ENST00000355530 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
SPNS3-201ENST00000355530 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
SPNS3-201ENST00000355530 MP68P56378 58 aa11.29□□□□□ -0.6
SPNS3-201ENST00000355530 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
SPNS3-201ENST00000355530 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
SPNS3-201ENST00000355530 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.61
SPNS3-201ENST00000355530 PRR15Q8IV56 129 aa11.27□□□□□ -0.61
SPNS3-201ENST00000355530 A8MWP4 228 aa11.26□□□□□ -0.61
SPNS3-201ENST00000355530 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
SPNS3-201ENST00000355530 CYP4F30PQ9H0H9 118 aa11.26□□□□□ -0.61
SPNS3-201ENST00000355530 LINC00472Q9H8W2 130 aa11.26□□□□□ -0.61
SPNS3-201ENST00000355530 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
SPNS3-201ENST00000355530 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
SPNS3-201ENST00000355530 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
SPNS3-201ENST00000355530 KRTAP13-1Q8IUC0 172 aa11.23□□□□□ -0.61
SPNS3-201ENST00000355530 TRAV22A0A0B4J277 110 aa11.22□□□□□ -0.61
SPNS3-201ENST00000355530 H3BPC8 53 aa11.2□□□□□ -0.62
SPNS3-201ENST00000355530 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
SPNS3-201ENST00000355530 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
SPNS3-201ENST00000355530 Q6ZRN7 208 aaPredicted RBP11.19□□□□□ -0.62
SPNS3-201ENST00000355530 LINC00208Q96KT6 92 aa11.19□□□□□ -0.62
SPNS3-201ENST00000355530 H0Y9P7 68 aa11.18□□□□□ -0.62
SPNS3-201ENST00000355530 PANO1I0J062 215 aa11.18□□□□□ -0.62
SPNS3-201ENST00000355530 NUPR2A6NF83 97 aa11.16□□□□□ -0.62
SPNS3-201ENST00000355530 Q1T7F1 81 aa11.16□□□□□ -0.62
SPNS3-201ENST00000355530 BRK1Q8WUW1 75 aa11.16□□□□□ -0.62
SPNS3-201ENST00000355530 PRR4Q16378 134 aa11.15□□□□□ -0.62
SPNS3-201ENST00000355530 MDFIQ99750 246 aa11.15□□□□□ -0.62
SPNS3-201ENST00000355530 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
SPNS3-201ENST00000355530 SPANXA2-OT1Q8N9U9 137 aa11.13□□□□□ -0.63
SPNS3-201ENST00000355530 MMP24-AS1A0A0U1RRL7 71 aa11.12□□□□□ -0.63
SPNS3-201ENST00000355530 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
SPNS3-201ENST00000355530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
SPNS3-201ENST00000355530 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
SPNS3-201ENST00000355530 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
SPNS3-201ENST00000355530 LINC00483Q53H64 154 aa11.09□□□□□ -0.63
SPNS3-201ENST00000355530 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
SPNS3-201ENST00000355530 Q96NJ1 140 aa11.07□□□□□ -0.64
SPNS3-201ENST00000355530 ZNF706Q9Y5V0 76 aaPredicted RBP11.06□□□□□ -0.64
SPNS3-201ENST00000355530 MOBPQ13875 183 aa11.05□□□□□ -0.64
SPNS3-201ENST00000355530 A0A087WTM6 91 aa11.03□□□□□ -0.64
SPNS3-201ENST00000355530 ASB16-AS1Q495Z4 193 aa11.03□□□□□ -0.64
SPNS3-201ENST00000355530 PLECQ15149 4684 aaKnown RBP11.03□□□□□ -0.64
SPNS3-201ENST00000355530 V9GYY9 64 aa11.02□□□□□ -0.64
SPNS3-201ENST00000355530 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
SPNS3-201ENST00000355530 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
SPNS3-201ENST00000355530 IGLV5-52A0A0A0MRZ9 124 aa10.99□□□□□ -0.65
SPNS3-201ENST00000355530 C8orf17Q9NRJ1 99 aa10.98□□□□□ -0.65
SPNS3-201ENST00000355530 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
SPNS3-201ENST00000355530 PSPHP1O15172 72 aa10.97□□□□□ -0.65
SPNS3-201ENST00000355530 RTL8CO15255 209 aa10.97□□□□□ -0.65
SPNS3-201ENST00000355530 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
SPNS3-201ENST00000355530 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
SPNS3-201ENST00000355530 IGLV7-46A0A075B6I9 117 aa10.93□□□□□ -0.66
SPNS3-201ENST00000355530 ZNF861PO60384 105 aa10.93□□□□□ -0.66
SPNS3-201ENST00000355530 Q6ZR54 194 aa10.93□□□□□ -0.66
SPNS3-201ENST00000355530 CDK2AP2O75956 126 aa10.92□□□□□ -0.66
SPNS3-201ENST00000355530 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
SPNS3-201ENST00000355530 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
SPNS3-201ENST00000355530 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
SPNS3-201ENST00000355530 A8MUN3 132 aa10.89□□□□□ -0.67
SPNS3-201ENST00000355530 Q8N9P0 234 aaPredicted RBP10.88□□□□□ -0.67
SPNS3-201ENST00000355530 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
SPNS3-201ENST00000355530 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
SPNS3-201ENST00000355530 MRPL34Q9BQ48 92 aaKnown RBP10.87□□□□□ -0.67
SPNS3-201ENST00000355530 NDUFS5O43920 106 aa10.87□□□□□ -0.67
SPNS3-201ENST00000355530 COA5Q86WW8 74 aa10.87□□□□□ -0.67
SPNS3-201ENST00000355530 CD164Q04900 197 aa10.86□□□□□ -0.67
SPNS3-201ENST00000355530 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
SPNS3-201ENST00000355530 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
SPNS3-201ENST00000355530 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
SPNS3-201ENST00000355530 Q5VV11 94 aa10.85□□□□□ -0.67
SPNS3-201ENST00000355530 PRKDCP78527 4128 aaKnown RBP10.83□□□□□ -0.68
SPNS3-201ENST00000355530 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
SPNS3-201ENST00000355530 A0A087X002 238 aa10.78□□□□□ -0.68
SPNS3-201ENST00000355530 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
SPNS3-201ENST00000355530 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
SPNS3-201ENST00000355530 PRR15LQ9BU68 103 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms