RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 FAM236CP0DP71 79 aa13.55□□□□□ -0.24
LIMS2-202ENST00000355119 NDUFC1O43677 76 aa13.54□□□□□ -0.24
LIMS2-202ENST00000355119 DSCR10P59022 87 aa13.54□□□□□ -0.24
LIMS2-202ENST00000355119 A0A0G2JQZ4 141 aa13.52□□□□□ -0.25
LIMS2-202ENST00000355119 TMEM254Q8TBM7 123 aa13.51□□□□□ -0.25
LIMS2-202ENST00000355119 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
LIMS2-202ENST00000355119 PANO1I0J062 215 aa13.49□□□□□ -0.25
LIMS2-202ENST00000355119 K7EQZ3 153 aa13.47□□□□□ -0.25
LIMS2-202ENST00000355119 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
LIMS2-202ENST00000355119 LYSTQ99698 3801 aa13.47□□□□□ -0.25
LIMS2-202ENST00000355119 A0A087WSZ3 146 aa13.46□□□□□ -0.25
LIMS2-202ENST00000355119 A0A087WTM6 91 aa13.46□□□□□ -0.25
LIMS2-202ENST00000355119 KRTAP13-1Q8IUC0 172 aa13.46□□□□□ -0.26
LIMS2-202ENST00000355119 A0A0U1RQV1 116 aa13.44□□□□□ -0.26
LIMS2-202ENST00000355119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-202ENST00000355119 OXTP01178 125 aa13.42□□□□□ -0.26
LIMS2-202ENST00000355119 FAM30AQ9NZY2 134 aa13.42□□□□□ -0.26
LIMS2-202ENST00000355119 HCG22E2RYF7 251 aa13.4□□□□□ -0.26
LIMS2-202ENST00000355119 SERP1Q9Y6X1 66 aa13.4□□□□□ -0.26
LIMS2-202ENST00000355119 ATP5EP56381 51 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-202ENST00000355119 PLECQ15149 4684 aaKnown RBP13.4□□□□□ -0.27
LIMS2-202ENST00000355119 LCE6AA0A183 80 aa13.37□□□□□ -0.27
LIMS2-202ENST00000355119 Q6ZR54 194 aa13.37□□□□□ -0.27
LIMS2-202ENST00000355119 CSMD3Q7Z407 3707 aa13.37□□□□□ -0.27
LIMS2-202ENST00000355119 RTL8CO15255 209 aa13.36□□□□□ -0.27
LIMS2-202ENST00000355119 DEFB116Q30KQ4 102 aa13.36□□□□□ -0.27
LIMS2-202ENST00000355119 DNAH7Q8WXX0 4024 aa13.36□□□□□ -0.27
LIMS2-202ENST00000355119 VPS13DQ5THJ4 4388 aa13.32□□□□□ -0.28
LIMS2-202ENST00000355119 SVIPQ8NHG7 77 aa13.3□□□□□ -0.28
LIMS2-202ENST00000355119 LINC00472Q9H8W2 130 aa13.29□□□□□ -0.28
LIMS2-202ENST00000355119 RPL37AP61513 92 aaKnown RBP13.28□□□□□ -0.28
LIMS2-202ENST00000355119 LINC00483Q53H64 154 aa13.28□□□□□ -0.28
LIMS2-202ENST00000355119 PLAC8Q9NZF1 115 aa13.28□□□□□ -0.28
LIMS2-202ENST00000355119 ZNF706Q9Y5V0 76 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-202ENST00000355119 C5orf47Q569G3 176 aa13.27□□□□□ -0.28
LIMS2-202ENST00000355119 A8MWP4 228 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 WFDC13Q8IUB5 93 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 PRR15Q8IV56 129 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 TENM2Q9NT68 2774 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 C1orf134Q5TEV5 83 aa13.25□□□□□ -0.29
LIMS2-202ENST00000355119 PSORS1C2Q9UIG4 136 aa13.23□□□□□ -0.29
LIMS2-202ENST00000355119 STARD9Q9P2P6 4700 aa13.23□□□□□ -0.29
LIMS2-202ENST00000355119 IGLV9-49A0A0B4J1Y8 123 aa13.22□□□□□ -0.29
LIMS2-202ENST00000355119 KRTAP29-1A8MX34 341 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-202ENST00000355119 ZCCHC13Q8WW36 166 aaKnown RBP13.22□□□□□ -0.29
LIMS2-202ENST00000355119 KRTAP21-3Q3LHN1 58 aa13.21□□□□□ -0.29
LIMS2-202ENST00000355119 Q5XG85 94 aa13.19□□□□□ -0.3
LIMS2-202ENST00000355119 CASC2Q6XLA1 102 aa13.19□□□□□ -0.3
LIMS2-202ENST00000355119 ZNF861PO60384 105 aa13.18□□□□□ -0.3
LIMS2-202ENST00000355119 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
LIMS2-202ENST00000355119 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.3
LIMS2-202ENST00000355119 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
LIMS2-202ENST00000355119 MP68P56378 58 aa13.13□□□□□ -0.31
LIMS2-202ENST00000355119 NDUFB1O75438 58 aa13.13□□□□□ -0.31
LIMS2-202ENST00000355119 LY6G6CO95867 125 aa13.13□□□□□ -0.31
LIMS2-202ENST00000355119 C4orf26Q17RF5 130 aa13.1□□□□□ -0.31
LIMS2-202ENST00000355119 MOBPQ13875 183 aa13.1□□□□□ -0.31
LIMS2-202ENST00000355119 Q96NJ1 140 aa13.1□□□□□ -0.31
LIMS2-202ENST00000355119 DNAH17Q9UFH2 4485 aa13.08□□□□□ -0.31
LIMS2-202ENST00000355119 SRRM2Q9UQ35 2752 aaKnown RBP13.08□□□□□ -0.32
LIMS2-202ENST00000355119 MMP24-AS1A0A0U1RRL7 71 aa13.08□□□□□ -0.32
LIMS2-202ENST00000355119 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
LIMS2-202ENST00000355119 H3BPC8 53 aa13.06□□□□□ -0.32
LIMS2-202ENST00000355119 IGLV7-43P04211 117 aa13.05□□□□□ -0.32
LIMS2-202ENST00000355119 H0Y9P7 68 aa13.03□□□□□ -0.32
LIMS2-202ENST00000355119 MEGF8Q7Z7M0 2845 aa13.03□□□□□ -0.32
LIMS2-202ENST00000355119 FP248Q71RG6 208 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-202ENST00000355119 HECTD4Q9Y4D8 3996 aa13.02□□□□□ -0.32
LIMS2-202ENST00000355119 LINC00208Q96KT6 92 aa13.02□□□□□ -0.33
LIMS2-202ENST00000355119 ANAPC11Q9NYG5 84 aa13.02□□□□□ -0.33
LIMS2-202ENST00000355119 hDV103S1A0JD37 113 aa13.01□□□□□ -0.33
LIMS2-202ENST00000355119 TRAV22A0A0B4J277 110 aa13.01□□□□□ -0.33
LIMS2-202ENST00000355119 DNAH2Q9P225 4427 aa12.98□□□□□ -0.33
LIMS2-202ENST00000355119 ASB16-AS1Q495Z4 193 aa12.98□□□□□ -0.33
LIMS2-202ENST00000355119 CYP4F30PQ9H0H9 118 aa12.97□□□□□ -0.33
LIMS2-202ENST00000355119 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
LIMS2-202ENST00000355119 C8orf17Q9NRJ1 99 aa12.96□□□□□ -0.33
LIMS2-202ENST00000355119 FAM229BQ4G0N7 80 aa12.96□□□□□ -0.34
LIMS2-202ENST00000355119 A0A1B0GVX0 72 aa12.95□□□□□ -0.34
LIMS2-202ENST00000355119 KMT2AQ03164 3969 aa12.94□□□□□ -0.34
LIMS2-202ENST00000355119 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
LIMS2-202ENST00000355119 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
LIMS2-202ENST00000355119 TP53AIP1Q9HCN2 124 aa12.93□□□□□ -0.34
LIMS2-202ENST00000355119 C1orf64Q8NEQ6 169 aa12.91□□□□□ -0.34
LIMS2-202ENST00000355119 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
LIMS2-202ENST00000355119 IGHV6-1A0A0B4J1U7 121 aa12.9□□□□□ -0.34
LIMS2-202ENST00000355119 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
LIMS2-202ENST00000355119 CD164Q04900 197 aa12.89□□□□□ -0.35
LIMS2-202ENST00000355119 SPANXA2-OT1Q8N9U9 137 aa12.89□□□□□ -0.35
LIMS2-202ENST00000355119 DNAH8Q96JB1 4490 aa12.88□□□□□ -0.35
LIMS2-202ENST00000355119 SSBP3-AS1Q7Z2R9 100 aa12.88□□□□□ -0.35
LIMS2-202ENST00000355119 PRR4Q16378 134 aa12.86□□□□□ -0.35
LIMS2-202ENST00000355119 Q6ZSA8 131 aa12.83□□□□□ -0.36
LIMS2-202ENST00000355119 MRPL34Q9BQ48 92 aaKnown RBP12.83□□□□□ -0.36
LIMS2-202ENST00000355119 MPLKIPQ8TAP9 179 aa12.82□□□□□ -0.36
LIMS2-202ENST00000355119 KRTAP10-1P60331 282 aa12.79□□□□□ -0.36
LIMS2-202ENST00000355119 NDUFS5O43920 106 aa12.79□□□□□ -0.36
LIMS2-202ENST00000355119 ALMS1Q8TCU4 4167 aa12.77□□□□□ -0.36
LIMS2-202ENST00000355119 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms