RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 EPM2AB3EWF7 344 aa12.29□□□□□ -0.44
COL13A1-201ENST00000354547 NDUFC1O43677 76 aa12.28□□□□□ -0.44
COL13A1-201ENST00000354547 A0A087WSZ3 146 aa12.28□□□□□ -0.44
COL13A1-201ENST00000354547 UBE2AP49459 152 aa12.27□□□□□ -0.45
COL13A1-201ENST00000354547 CNBPP62633 177 aaKnown RBP12.27□□□□□ -0.45
COL13A1-201ENST00000354547 A0A0U1RQV1 116 aa12.26□□□□□ -0.45
COL13A1-201ENST00000354547 A0A1B0GW54 56 aa12.26□□□□□ -0.45
COL13A1-201ENST00000354547 APLNQ9ULZ1 77 aa12.25□□□□□ -0.45
COL13A1-201ENST00000354547 RPL37AP61513 92 aaKnown RBP12.23□□□□□ -0.45
COL13A1-201ENST00000354547 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
COL13A1-201ENST00000354547 WFDC13Q8IUB5 93 aa12.22□□□□□ -0.45
COL13A1-201ENST00000354547 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
COL13A1-201ENST00000354547 PANO1I0J062 215 aa12.18□□□□□ -0.46
COL13A1-201ENST00000354547 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
COL13A1-201ENST00000354547 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
COL13A1-201ENST00000354547 FP248Q71RG6 208 aaPredicted RBP12.16□□□□□ -0.46
COL13A1-201ENST00000354547 PLECQ15149 4684 aaKnown RBP12.16□□□□□ -0.46
COL13A1-201ENST00000354547 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
COL13A1-201ENST00000354547 SMIM26A0A096LP01 95 aa12.13□□□□□ -0.47
COL13A1-201ENST00000354547 C9orf163Q8N9P6 203 aa12.13□□□□□ -0.47
COL13A1-201ENST00000354547 MDFIQ99750 246 aa12.13□□□□□ -0.47
COL13A1-201ENST00000354547 ATP5EP56381 51 aaPredicted RBP12.12□□□□□ -0.47
COL13A1-201ENST00000354547 PRR4Q16378 134 aa12.12□□□□□ -0.47
COL13A1-201ENST00000354547 NBDYA0A0U1RRE5 68 aa12.11□□□□□ -0.47
COL13A1-201ENST00000354547 LRCOL1A6NCL2 159 aa12.11□□□□□ -0.47
COL13A1-201ENST00000354547 MPLKIPQ8TAP9 179 aa12.11□□□□□ -0.47
COL13A1-201ENST00000354547 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
COL13A1-201ENST00000354547 B9D2Q9BPU9 175 aa12.08□□□□□ -0.48
COL13A1-201ENST00000354547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.05□□□□□ -0.48
COL13A1-201ENST00000354547 IGLV9-49A0A0B4J1Y8 123 aa12.04□□□□□ -0.48
COL13A1-201ENST00000354547 LCE6AA0A183 80 aa12.03□□□□□ -0.48
COL13A1-201ENST00000354547 H0Y9J4 135 aa12.01□□□□□ -0.49
COL13A1-201ENST00000354547 LINC00336Q6ZUF6 198 aa12.01□□□□□ -0.49
COL13A1-201ENST00000354547 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
COL13A1-201ENST00000354547 CASC2Q6XLA1 102 aa12□□□□□ -0.49
COL13A1-201ENST00000354547 ZCCHC13Q8WW36 166 aaKnown RBP11.99□□□□□ -0.49
COL13A1-201ENST00000354547 LINC00208Q96KT6 92 aa11.99□□□□□ -0.49
COL13A1-201ENST00000354547 SPRR1BP22528 89 aa11.99□□□□□ -0.49
COL13A1-201ENST00000354547 DYNC2H1Q8NCM8 4307 aaKnown RBP11.98□□□□□ -0.49
COL13A1-201ENST00000354547 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
COL13A1-201ENST00000354547 PRR15Q8IV56 129 aa11.97□□□□□ -0.49
COL13A1-201ENST00000354547 TGP01266 2768 aa11.97□□□□□ -0.49
COL13A1-201ENST00000354547 LINC00472Q9H8W2 130 aa11.96□□□□□ -0.49
COL13A1-201ENST00000354547 STARD9Q9P2P6 4700 aa11.96□□□□□ -0.49
COL13A1-201ENST00000354547 MP68P56378 58 aa11.96□□□□□ -0.5
COL13A1-201ENST00000354547 C1orf64Q8NEQ6 169 aa11.95□□□□□ -0.5
COL13A1-201ENST00000354547 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
COL13A1-201ENST00000354547 A8MWP4 228 aa11.94□□□□□ -0.5
COL13A1-201ENST00000354547 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
COL13A1-201ENST00000354547 KRTAP13-1Q8IUC0 172 aa11.92□□□□□ -0.5
COL13A1-201ENST00000354547 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
COL13A1-201ENST00000354547 hDV103S1A0JD37 113 aa11.91□□□□□ -0.5
COL13A1-201ENST00000354547 H0Y9P7 68 aa11.91□□□□□ -0.5
COL13A1-201ENST00000354547 A0A087WTM6 91 aa11.9□□□□□ -0.5
COL13A1-201ENST00000354547 PRKDCP78527 4128 aaKnown RBP11.9□□□□□ -0.5
COL13A1-201ENST00000354547 PKIGQ9Y2B9 76 aa11.89□□□□□ -0.51
COL13A1-201ENST00000354547 KMT2AQ03164 3969 aa11.88□□□□□ -0.51
COL13A1-201ENST00000354547 BRK1Q8WUW1 75 aa11.86□□□□□ -0.51
COL13A1-201ENST00000354547 FRAS1Q86XX4 4008 aa11.86□□□□□ -0.51
COL13A1-201ENST00000354547 RTL8CO15255 209 aa11.86□□□□□ -0.51
COL13A1-201ENST00000354547 TRAV22A0A0B4J277 110 aa11.86□□□□□ -0.51
COL13A1-201ENST00000354547 PSORS1C2Q9UIG4 136 aa11.85□□□□□ -0.51
COL13A1-201ENST00000354547 VPS13DQ5THJ4 4388 aa11.84□□□□□ -0.51
COL13A1-201ENST00000354547 NDUFB1O75438 58 aa11.84□□□□□ -0.51
COL13A1-201ENST00000354547 MOBPQ13875 183 aa11.84□□□□□ -0.51
COL13A1-201ENST00000354547 J3QL48 77 aa11.83□□□□□ -0.52
COL13A1-201ENST00000354547 HECTD4Q9Y4D8 3996 aa11.83□□□□□ -0.52
COL13A1-201ENST00000354547 MEGF8Q7Z7M0 2845 aa11.83□□□□□ -0.52
COL13A1-201ENST00000354547 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
COL13A1-201ENST00000354547 DNAH2Q9P225 4427 aa11.79□□□□□ -0.52
COL13A1-201ENST00000354547 PRO0628Q9UI54 55 aa11.78□□□□□ -0.52
COL13A1-201ENST00000354547 IGHV6-1A0A0B4J1U7 121 aa11.78□□□□□ -0.52
COL13A1-201ENST00000354547 Q96NJ1 140 aa11.78□□□□□ -0.52
COL13A1-201ENST00000354547 IGLV5-52A0A0A0MRZ9 124 aa11.77□□□□□ -0.53
COL13A1-201ENST00000354547 PSPHP1O15172 72 aa11.76□□□□□ -0.53
COL13A1-201ENST00000354547 NDUFS5O43920 106 aa11.76□□□□□ -0.53
COL13A1-201ENST00000354547 DNAH8Q96JB1 4490 aa11.76□□□□□ -0.53
COL13A1-201ENST00000354547 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
COL13A1-201ENST00000354547 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
COL13A1-201ENST00000354547 FBN3Q75N90 2809 aa11.74□□□□□ -0.53
COL13A1-201ENST00000354547 PCOTHQ58A44 107 aa11.73□□□□□ -0.53
COL13A1-201ENST00000354547 LINC00483Q53H64 154 aa11.72□□□□□ -0.53
COL13A1-201ENST00000354547 SPINK6Q6UWN8 80 aa11.71□□□□□ -0.53
COL13A1-201ENST00000354547 ZNF706Q9Y5V0 76 aaPredicted RBP11.71□□□□□ -0.53
COL13A1-201ENST00000354547 ZNF861PO60384 105 aa11.71□□□□□ -0.54
COL13A1-201ENST00000354547 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
COL13A1-201ENST00000354547 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
COL13A1-201ENST00000354547 DNAH17Q9UFH2 4485 aa11.69□□□□□ -0.54
COL13A1-201ENST00000354547 Q6ZR54 194 aa11.68□□□□□ -0.54
COL13A1-201ENST00000354547 A0A087X002 238 aa11.68□□□□□ -0.54
COL13A1-201ENST00000354547 LY6G6CO95867 125 aa11.68□□□□□ -0.54
COL13A1-201ENST00000354547 NOTCH2NLQ7Z3S9 236 aa11.68□□□□□ -0.54
COL13A1-201ENST00000354547 PLAC8Q9NZF1 115 aa11.68□□□□□ -0.54
COL13A1-201ENST00000354547 H3BPC8 53 aa11.67□□□□□ -0.54
COL13A1-201ENST00000354547 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
COL13A1-201ENST00000354547 Q1T7F1 81 aa11.65□□□□□ -0.54
COL13A1-201ENST00000354547 CIRBP-AS1Q8TBR5 109 aa11.65□□□□□ -0.54
COL13A1-201ENST00000354547 A0A1B0GVX0 72 aa11.65□□□□□ -0.55
COL13A1-201ENST00000354547 A8MUN3 132 aa11.61□□□□□ -0.55
COL13A1-201ENST00000354547 SPANXA2-OT1Q8N9U9 137 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms