RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 UBE2V1Q13404 147 aa16.16■□□□□ 0.18
SSBP4-202ENST00000348495 ANAPC11Q9NYG5 84 aa16.16■□□□□ 0.18
SSBP4-202ENST00000348495 PKHD1L1Q86WI1 4243 aa16.15■□□□□ 0.18
SSBP4-202ENST00000348495 H3BT86 120 aa16.14■□□□□ 0.17
SSBP4-202ENST00000348495 KRTAP4-5Q9BYR2 181 aa16.14■□□□□ 0.17
SSBP4-202ENST00000348495 SMCPP49901 116 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-202ENST00000348495 C3orf22Q8N5N4 141 aa16.12■□□□□ 0.17
SSBP4-202ENST00000348495 LINC01600Q96MT4 127 aa16.12■□□□□ 0.17
SSBP4-202ENST00000348495 ANKRD29Q8N6D5 301 aa16.11■□□□□ 0.17
SSBP4-202ENST00000348495 FAM229BQ4G0N7 80 aa16.1■□□□□ 0.17
SSBP4-202ENST00000348495 NDUFV3P56181 108 aaKnown RBP16.08■□□□□ 0.16
SSBP4-202ENST00000348495 F8W1H4 67 aa16.07■□□□□ 0.16
SSBP4-202ENST00000348495 LAMTOR3Q9UHA4 124 aa16.07■□□□□ 0.16
SSBP4-202ENST00000348495 A0A087X002 238 aa16.05■□□□□ 0.16
SSBP4-202ENST00000348495 CRYGAP11844 174 aa16.01■□□□□ 0.15
SSBP4-202ENST00000348495 KRTAP13-2Q52LG2 175 aa15.99■□□□□ 0.15
SSBP4-202ENST00000348495 IGLV9-49A0A0B4J1Y8 123 aa15.99■□□□□ 0.15
SSBP4-202ENST00000348495 IGLV8-61A0A075B6I0 122 aa15.97■□□□□ 0.15
SSBP4-202ENST00000348495 F8WEM9 126 aa15.97■□□□□ 0.15
SSBP4-202ENST00000348495 OBSCN-AS1Q96MR7 158 aa15.97■□□□□ 0.15
SSBP4-202ENST00000348495 PRR26Q8N8Z3 221 aa15.96■□□□□ 0.15
SSBP4-202ENST00000348495 FLG2Q5D862 2391 aaPredicted RBP15.95■□□□□ 0.14
SSBP4-202ENST00000348495 MOBPQ13875 183 aa15.94■□□□□ 0.14
SSBP4-202ENST00000348495 A0A1B0GV72 72 aa15.93■□□□□ 0.14
SSBP4-202ENST00000348495 JMJD7-PLA2G4BH0Y9G9 81 aa15.93■□□□□ 0.14
SSBP4-202ENST00000348495 C9orf153Q5TBE3 101 aa15.92■□□□□ 0.14
SSBP4-202ENST00000348495 Q8NBF4 154 aa15.92■□□□□ 0.14
SSBP4-202ENST00000348495 PCLOQ9Y6V0 5065 aa15.91■□□□□ 0.14
SSBP4-202ENST00000348495 RBM3P98179 157 aaKnown RBP15.91■□□□□ 0.14
SSBP4-202ENST00000348495 ETDBQ3ZM63 59 aa15.89■□□□□ 0.13
SSBP4-202ENST00000348495 TEN1Q86WV5 123 aa15.89■□□□□ 0.13
SSBP4-202ENST00000348495 LRP1Q07954 4544 aaKnown RBP15.88■□□□□ 0.13
SSBP4-202ENST00000348495 SSBP3-AS1Q7Z2R9 100 aa15.88■□□□□ 0.13
SSBP4-202ENST00000348495 Q6JHZ5 121 aa15.87■□□□□ 0.13
SSBP4-202ENST00000348495 TRBV7-4A0A0J9YYF1 115 aa15.86■□□□□ 0.13
SSBP4-202ENST00000348495 IGFL1Q6UW32 110 aa15.85■□□□□ 0.13
SSBP4-202ENST00000348495 TYMSOSQ8TAI1 123 aa15.85■□□□□ 0.13
SSBP4-202ENST00000348495 A0A0G2JQZ4 141 aa15.84■□□□□ 0.13
SSBP4-202ENST00000348495 C14orf132Q9NPU4 83 aa15.83■□□□□ 0.13
SSBP4-202ENST00000348495 KRTAP10-8P60410 259 aa15.82■□□□□ 0.12
SSBP4-202ENST00000348495 DSCR8Q96T75 97 aa15.82■□□□□ 0.12
SSBP4-202ENST00000348495 ABCA13Q86UQ4 5058 aa15.82■□□□□ 0.12
SSBP4-202ENST00000348495 FAT3Q8TDW7 4589 aa15.82■□□□□ 0.12
SSBP4-202ENST00000348495 MYCBP2O75592 4640 aa15.82■□□□□ 0.12
SSBP4-202ENST00000348495 LOC110117498A0A087WWA1 95 aa15.8■□□□□ 0.12
SSBP4-202ENST00000348495 OXTP01178 125 aa15.8■□□□□ 0.12
SSBP4-202ENST00000348495 Q6ZQT0 140 aa15.77■□□□□ 0.12
SSBP4-202ENST00000348495 MT1HL1P0DM35 61 aa15.75■□□□□ 0.11
SSBP4-202ENST00000348495 PDE6GP18545 87 aa15.75■□□□□ 0.11
SSBP4-202ENST00000348495 A0A1W2PNM2 257 aa15.74■□□□□ 0.11
SSBP4-202ENST00000348495 KRTAP29-1A8MX34 341 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-202ENST00000348495 CCKP06307 115 aa15.71■□□□□ 0.1
SSBP4-202ENST00000348495 Q6Q795 121 aa15.71■□□□□ 0.1
SSBP4-202ENST00000348495 TNXBP22105 4242 aa15.7■□□□□ 0.1
SSBP4-202ENST00000348495 CD164Q04900 197 aa15.7■□□□□ 0.1
SSBP4-202ENST00000348495 LINC00304Q8N9R0 145 aa15.68■□□□□ 0.1
SSBP4-202ENST00000348495 C21orf62-AS1Q17RA5 79 aa15.65■□□□□ 0.1
SSBP4-202ENST00000348495 HRCT1Q6UXD1 115 aa15.65■□□□□ 0.1
SSBP4-202ENST00000348495 VPS25Q9BRG1 176 aa15.64■□□□□ 0.09
SSBP4-202ENST00000348495 SPAG11AQ6PDA7 123 aa15.63■□□□□ 0.09
SSBP4-202ENST00000348495 TRBV7-7A0A0K0K1E9 115 aa15.63■□□□□ 0.09
SSBP4-202ENST00000348495 C4orf48Q5BLP8 95 aa15.61■□□□□ 0.09
SSBP4-202ENST00000348495 SPINK1P00995 79 aa15.6■□□□□ 0.09
SSBP4-202ENST00000348495 A0A1B0GW54 56 aa15.57■□□□□ 0.08
SSBP4-202ENST00000348495 A0A087WSZ3 146 aa15.55■□□□□ 0.08
SSBP4-202ENST00000348495 RPS29P62273 56 aaKnown RBP15.55■□□□□ 0.08
SSBP4-202ENST00000348495 Q5XG85 94 aa15.53■□□□□ 0.08
SSBP4-202ENST00000348495 DMBT1Q9UGM3 2413 aaPredicted RBP15.51■□□□□ 0.07
SSBP4-202ENST00000348495 J3QL48 77 aa15.48■□□□□ 0.07
SSBP4-202ENST00000348495 LIMD2Q9BT23 127 aa15.47■□□□□ 0.07
SSBP4-202ENST00000348495 FAM240AA0A1B0GVK7 77 aa15.46■□□□□ 0.06
SSBP4-202ENST00000348495 SS18L2Q9UHA2 77 aa15.45■□□□□ 0.06
SSBP4-202ENST00000348495 ASB16-AS1Q495Z4 193 aa15.43■□□□□ 0.06
SSBP4-202ENST00000348495 LINC00846Q9NV44 126 aa15.43■□□□□ 0.06
SSBP4-202ENST00000348495 J3QR89 54 aa15.42■□□□□ 0.06
SSBP4-202ENST00000348495 ACYP1P07311 99 aa15.42■□□□□ 0.06
SSBP4-202ENST00000348495 Q96NJ1 140 aa15.35■□□□□ 0.05
SSBP4-202ENST00000348495 LINC00472Q9H8W2 130 aa15.34■□□□□ 0.05
SSBP4-202ENST00000348495 C1orf195Q5TG92 126 aa15.34■□□□□ 0.05
SSBP4-202ENST00000348495 K7ERU9 68 aa15.33■□□□□ 0.04
SSBP4-202ENST00000348495 NREPQ16612 68 aa15.33■□□□□ 0.04
SSBP4-202ENST00000348495 Q6ZVQ6 151 aa15.33■□□□□ 0.04
SSBP4-202ENST00000348495 UBL5Q9BZL1 73 aa15.31■□□□□ 0.04
SSBP4-202ENST00000348495 RETNLBQ9BQ08 111 aa15.26■□□□□ 0.03
SSBP4-202ENST00000348495 DEFB116Q30KQ4 102 aa15.23■□□□□ 0.03
SSBP4-202ENST00000348495 CDIP1Q9H305 208 aa15.19■□□□□ 0.02
SSBP4-202ENST00000348495 IGKV4-1P06312 121 aa15.18■□□□□ 0.02
SSBP4-202ENST00000348495 J3KT08 172 aa15.17■□□□□ 0.02
SSBP4-202ENST00000348495 HERC1Q15751 4861 aa15.16■□□□□ 0.02
SSBP4-202ENST00000348495 SIGMAR1Q99720 223 aa15.16■□□□□ 0.02
SSBP4-202ENST00000348495 BPY2O14599 106 aa15.15■□□□□ 0.02
SSBP4-202ENST00000348495 FP248Q71RG6 208 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-202ENST00000348495 DSCR10P59022 87 aa15.12■□□□□ 0.01
SSBP4-202ENST00000348495 LINC00643Q86TS7 51 aa15.12■□□□□ 0.01
SSBP4-202ENST00000348495 CXCL6P80162 114 aa15.09■□□□□ 0.01
SSBP4-202ENST00000348495 A8MWP4 228 aa15.07■□□□□ 0
SSBP4-202ENST00000348495 ATP5EP2Q5VTU8 51 aa15.06■□□□□ 0
SSBP4-202ENST00000348495 IGLV7-46A0A075B6I9 117 aa15.04■□□□□ -0
SSBP4-202ENST00000348495 IGKV3D-7A0A0C4DH55 119 aa15.04■□□□□ -0
SSBP4-202ENST00000348495 PRR4Q16378 134 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms