RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IGKV2-24A0A0C4DH68 120 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 J3QL48 77 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 PRLHP81277 87 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
CLCN3-201ENST00000347613 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 CXCL6P80162 114 aa3.8□□□□□ -1.8
CLCN3-201ENST00000347613 MRPL55Q7Z7F7 128 aaKnown RBP3.8□□□□□ -1.8
CLCN3-201ENST00000347613 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
CLCN3-201ENST00000347613 PLA2G2DQ9UNK4 145 aa3.79□□□□□ -1.8
CLCN3-201ENST00000347613 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
CLCN3-201ENST00000347613 RBM12B-AS1Q9P1G2 102 aa3.78□□□□□ -1.8
CLCN3-201ENST00000347613 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
CLCN3-201ENST00000347613 PRYO14603 147 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 DSCR10P59022 87 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 KRTAP3-3Q9BYR6 98 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 A0A0U1RQV1 116 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 TRAV7A0A075B6U4 112 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
CLCN3-201ENST00000347613 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 ETDCA0A1B0GVM5 59 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 K7EQZ3 153 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 PDE6GP18545 87 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 UBE2BP63146 152 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 NREPQ16612 68 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 TMEM258P61165 79 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 REG3GQ6UW15 175 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
CLCN3-201ENST00000347613 F8WEM9 126 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 IGFL1Q6UW32 110 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 LRCOL1A6NCL2 159 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
CLCN3-201ENST00000347613 KLKP1Q107X0 134 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 FAM30AQ9NZY2 134 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 HIGD2AQ9BW72 106 aa3.75□□□□□ -1.81
CLCN3-201ENST00000347613 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
CLCN3-201ENST00000347613 PLA2G1BP04054 148 aaKnown RBP3.74□□□□□ -1.81
CLCN3-201ENST00000347613 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
CLCN3-201ENST00000347613 DHRS4-AS1Q9P1J3 65 aa3.74□□□□□ -1.81
CLCN3-201ENST00000347613 Q8NBF4 154 aa3.74□□□□□ -1.81
CLCN3-201ENST00000347613 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
CLCN3-201ENST00000347613 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
CLCN3-201ENST00000347613 C16orf90A8MZG2 172 aa3.73□□□□□ -1.81
CLCN3-201ENST00000347613 LINC00474Q9P2X8 69 aa3.73□□□□□ -1.81
CLCN3-201ENST00000347613 H3BQ85 93 aa3.72□□□□□ -1.81
CLCN3-201ENST00000347613 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
CLCN3-201ENST00000347613 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
CLCN3-201ENST00000347613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.72□□□□□ -1.81
CLCN3-201ENST00000347613 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
CLCN3-201ENST00000347613 A0A087WSZ3 146 aa3.7□□□□□ -1.82
CLCN3-201ENST00000347613 PSCAO43653 123 aa3.7□□□□□ -1.82
CLCN3-201ENST00000347613 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CLCN3-201ENST00000347613 BCE1O60756 84 aa3.7□□□□□ -1.82
CLCN3-201ENST00000347613 PRR15Q8IV56 129 aa3.7□□□□□ -1.82
CLCN3-201ENST00000347613 Q75L30 129 aa3.69□□□□□ -1.82
CLCN3-201ENST00000347613 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
CLCN3-201ENST00000347613 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
CLCN3-201ENST00000347613 UBE2DNLQ8IWF7 75 aa3.69□□□□□ -1.82
CLCN3-201ENST00000347613 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
CLCN3-201ENST00000347613 LCE6AA0A183 80 aa3.68□□□□□ -1.82
CLCN3-201ENST00000347613 WFDC13Q8IUB5 93 aa3.68□□□□□ -1.82
CLCN3-201ENST00000347613 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
CLCN3-201ENST00000347613 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
CLCN3-201ENST00000347613 PRR4Q16378 134 aa3.66□□□□□ -1.82
CLCN3-201ENST00000347613 UBE2AP49459 152 aa3.66□□□□□ -1.82
CLCN3-201ENST00000347613 B9D2Q9BPU9 175 aa3.66□□□□□ -1.82
CLCN3-201ENST00000347613 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
CLCN3-201ENST00000347613 KRTAP29-1A8MX34 341 aaPredicted RBP3.65□□□□□ -1.82
CLCN3-201ENST00000347613 LINC00472Q9H8W2 130 aa3.65□□□□□ -1.82
CLCN3-201ENST00000347613 Q96NJ1 140 aa3.65□□□□□ -1.82
CLCN3-201ENST00000347613 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.82
CLCN3-201ENST00000347613 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
CLCN3-201ENST00000347613 HCG22E2RYF7 251 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 A0A087X002 238 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 SPRR1BP22528 89 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 MOBPQ13875 183 aa3.64□□□□□ -1.83
CLCN3-201ENST00000347613 A0A087WTM6 91 aa3.63□□□□□ -1.83
CLCN3-201ENST00000347613 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
CLCN3-201ENST00000347613 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
CLCN3-201ENST00000347613 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
CLCN3-201ENST00000347613 H0Y9J4 135 aa3.62□□□□□ -1.83
CLCN3-201ENST00000347613 A0A1B0GW54 56 aa3.62□□□□□ -1.83
CLCN3-201ENST00000347613 KRTAP21-3Q3LHN1 58 aa3.61□□□□□ -1.83
CLCN3-201ENST00000347613 C1orf64Q8NEQ6 169 aa3.61□□□□□ -1.83
CLCN3-201ENST00000347613 FAT1Q14517 4588 aa3.61□□□□□ -1.83
CLCN3-201ENST00000347613 Q6ZR54 194 aa3.61□□□□□ -1.83
CLCN3-201ENST00000347613 MMP24-AS1A0A0U1RRL7 71 aa3.6□□□□□ -1.83
CLCN3-201ENST00000347613 WWC2-AS2Q96NR7 200 aa3.6□□□□□ -1.83
CLCN3-201ENST00000347613 RTL8CO15255 209 aa3.6□□□□□ -1.83
CLCN3-201ENST00000347613 hDV103S1A0JD37 113 aa3.59□□□□□ -1.83
CLCN3-201ENST00000347613 NDUFC1O43677 76 aa3.59□□□□□ -1.83
CLCN3-201ENST00000347613 LINC00313P59037 77 aa3.59□□□□□ -1.83
CLCN3-201ENST00000347613 KRTAP10-2P60368 255 aa3.59□□□□□ -1.83
CLCN3-201ENST00000347613 A8MUN3 132 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms