RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ZNF706Q9Y5V0 76 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-202ENST00000346495 SIGMAR1Q99720 223 aa13.07□□□□□ -0.32
TSPAN3-202ENST00000346495 LINC00846Q9NV44 126 aa13.06□□□□□ -0.32
TSPAN3-202ENST00000346495 XGP55808 180 aa13.06□□□□□ -0.32
TSPAN3-202ENST00000346495 SPRR4Q96PI1 79 aa13.06□□□□□ -0.32
TSPAN3-202ENST00000346495 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.32
TSPAN3-202ENST00000346495 KMT2CQ8NEZ4 4911 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-202ENST00000346495 LINC00483Q53H64 154 aa13.02□□□□□ -0.33
TSPAN3-202ENST00000346495 LINC00643Q86TS7 51 aa13.01□□□□□ -0.33
TSPAN3-202ENST00000346495 MT-ATP8P03928 68 aa13□□□□□ -0.33
TSPAN3-202ENST00000346495 UBL5Q9BZL1 73 aa12.97□□□□□ -0.33
TSPAN3-202ENST00000346495 A0A1B0GW54 56 aa12.95□□□□□ -0.34
TSPAN3-202ENST00000346495 A0A1W2PNM2 257 aa12.95□□□□□ -0.34
TSPAN3-202ENST00000346495 Q6JHZ5 121 aa12.95□□□□□ -0.34
TSPAN3-202ENST00000346495 IGFL1Q6UW32 110 aa12.95□□□□□ -0.34
TSPAN3-202ENST00000346495 Q8NBF4 154 aa12.95□□□□□ -0.34
TSPAN3-202ENST00000346495 PKHD1P08F94 4074 aa12.91□□□□□ -0.34
TSPAN3-202ENST00000346495 LRP1BQ9NZR2 4599 aa12.9□□□□□ -0.34
TSPAN3-202ENST00000346495 SRRM2Q9UQ35 2752 aaKnown RBP12.89□□□□□ -0.35
TSPAN3-202ENST00000346495 Q6ZVQ6 151 aa12.89□□□□□ -0.35
TSPAN3-202ENST00000346495 DYNC1H1Q14204 4646 aaKnown RBP12.89□□□□□ -0.35
TSPAN3-202ENST00000346495 IGLV9-49A0A0B4J1Y8 123 aa12.88□□□□□ -0.35
TSPAN3-202ENST00000346495 A0A0G2JQZ4 141 aa12.88□□□□□ -0.35
TSPAN3-202ENST00000346495 CRYGAP11844 174 aa12.88□□□□□ -0.35
TSPAN3-202ENST00000346495 RPL37AP61513 92 aaKnown RBP12.88□□□□□ -0.35
TSPAN3-202ENST00000346495 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
TSPAN3-202ENST00000346495 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
TSPAN3-202ENST00000346495 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
TSPAN3-202ENST00000346495 TRBV7-7A0A0K0K1E9 115 aa12.85□□□□□ -0.35
TSPAN3-202ENST00000346495 Q6Q795 121 aa12.84□□□□□ -0.35
TSPAN3-202ENST00000346495 IMUPQ9GZP8 106 aa12.84□□□□□ -0.35
TSPAN3-202ENST00000346495 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
TSPAN3-202ENST00000346495 NREPQ16612 68 aa12.83□□□□□ -0.36
TSPAN3-202ENST00000346495 SMR3BP02814 79 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-202ENST00000346495 MOBPQ13875 183 aa12.81□□□□□ -0.36
TSPAN3-202ENST00000346495 SCGB1A1P11684 91 aa12.8□□□□□ -0.36
TSPAN3-202ENST00000346495 CXCL6P80162 114 aa12.77□□□□□ -0.37
TSPAN3-202ENST00000346495 FAM229BQ4G0N7 80 aa12.77□□□□□ -0.37
TSPAN3-202ENST00000346495 SPINK6Q6UWN8 80 aa12.77□□□□□ -0.37
TSPAN3-202ENST00000346495 RYR3Q15413 4870 aa12.75□□□□□ -0.37
TSPAN3-202ENST00000346495 A0A087WSZ3 146 aa12.75□□□□□ -0.37
TSPAN3-202ENST00000346495 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
TSPAN3-202ENST00000346495 SSBP3-AS1Q7Z2R9 100 aa12.72□□□□□ -0.37
TSPAN3-202ENST00000346495 KRTAP1-4P0C5Y4 121 aa12.71□□□□□ -0.37
TSPAN3-202ENST00000346495 VPS13BQ7Z7G8 4022 aa12.71□□□□□ -0.37
TSPAN3-202ENST00000346495 BPY2O14599 106 aa12.7□□□□□ -0.38
TSPAN3-202ENST00000346495 A0A087X002 238 aa12.68□□□□□ -0.38
TSPAN3-202ENST00000346495 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
TSPAN3-202ENST00000346495 KRTAP10-4P60372 401 aaPredicted RBP12.68□□□□□ -0.38
TSPAN3-202ENST00000346495 HIST1H4AP62805 103 aaKnown RBP12.68□□□□□ -0.38
TSPAN3-202ENST00000346495 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
TSPAN3-202ENST00000346495 KRTAP13-2Q52LG2 175 aa12.65□□□□□ -0.38
TSPAN3-202ENST00000346495 PLA2G1BP04054 148 aaKnown RBP12.64□□□□□ -0.39
TSPAN3-202ENST00000346495 CD164Q04900 197 aa12.63□□□□□ -0.39
TSPAN3-202ENST00000346495 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
TSPAN3-202ENST00000346495 SS18L2Q9UHA2 77 aa12.62□□□□□ -0.39
TSPAN3-202ENST00000346495 A0A087WVE0 104 aa12.61□□□□□ -0.39
TSPAN3-202ENST00000346495 FAM236AA0A1B0GUQ0 79 aa12.6□□□□□ -0.39
TSPAN3-202ENST00000346495 FAM236BA0A1B0GV22 79 aa12.6□□□□□ -0.39
TSPAN3-202ENST00000346495 PCP4P48539 62 aa12.57□□□□□ -0.4
TSPAN3-202ENST00000346495 LINC00472Q9H8W2 130 aa12.57□□□□□ -0.4
TSPAN3-202ENST00000346495 IGKV4-1P06312 121 aa12.55□□□□□ -0.4
TSPAN3-202ENST00000346495 DSCR10P59022 87 aa12.55□□□□□ -0.4
TSPAN3-202ENST00000346495 DEFB116Q30KQ4 102 aa12.55□□□□□ -0.4
TSPAN3-202ENST00000346495 Q8N9L7 120 aa12.55□□□□□ -0.4
TSPAN3-202ENST00000346495 TYMSOSQ8TAI1 123 aa12.55□□□□□ -0.4
TSPAN3-202ENST00000346495 J3KT08 172 aa12.51□□□□□ -0.41
TSPAN3-202ENST00000346495 Q5VSD8 79 aa12.51□□□□□ -0.41
TSPAN3-202ENST00000346495 FAT1Q14517 4588 aa12.49□□□□□ -0.41
TSPAN3-202ENST00000346495 PRR26Q8N8Z3 221 aa12.49□□□□□ -0.41
TSPAN3-202ENST00000346495 Q96NJ1 140 aa12.49□□□□□ -0.41
TSPAN3-202ENST00000346495 K7EQZ3 153 aa12.48□□□□□ -0.41
TSPAN3-202ENST00000346495 ANAPC13Q9BS18 74 aa12.48□□□□□ -0.41
TSPAN3-202ENST00000346495 ATOX1O00244 68 aa12.47□□□□□ -0.41
TSPAN3-202ENST00000346495 ASB16-AS1Q495Z4 193 aa12.45□□□□□ -0.42
TSPAN3-202ENST00000346495 C4orf48Q5BLP8 95 aa12.45□□□□□ -0.42
TSPAN3-202ENST00000346495 A8MWP4 228 aa12.44□□□□□ -0.42
TSPAN3-202ENST00000346495 Q5XG85 94 aa12.44□□□□□ -0.42
TSPAN3-202ENST00000346495 HSPG2P98160 4391 aa12.42□□□□□ -0.42
TSPAN3-202ENST00000346495 LIMD2Q9BT23 127 aa12.41□□□□□ -0.42
TSPAN3-202ENST00000346495 PKHD1L1Q86WI1 4243 aa12.41□□□□□ -0.42
TSPAN3-202ENST00000346495 PRR15Q8IV56 129 aa12.4□□□□□ -0.42
TSPAN3-202ENST00000346495 NDUFB1O75438 58 aa12.4□□□□□ -0.42
TSPAN3-202ENST00000346495 SPINK1P00995 79 aa12.4□□□□□ -0.42
TSPAN3-202ENST00000346495 RYR1P21817 5038 aa12.39□□□□□ -0.43
TSPAN3-202ENST00000346495 SPAG11AQ6PDA7 123 aa12.39□□□□□ -0.43
TSPAN3-202ENST00000346495 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
TSPAN3-202ENST00000346495 Q8N1X5 172 aa12.37□□□□□ -0.43
TSPAN3-202ENST00000346495 HCG22E2RYF7 251 aa12.35□□□□□ -0.43
TSPAN3-202ENST00000346495 RPS29P62273 56 aaKnown RBP12.33□□□□□ -0.43
TSPAN3-202ENST00000346495 SMIM20Q8N5G0 67 aa12.32□□□□□ -0.44
TSPAN3-202ENST00000346495 KRTAP17-1Q9BYP8 105 aa12.32□□□□□ -0.44
TSPAN3-202ENST00000346495 A0A1B0GVX0 72 aa12.3□□□□□ -0.44
TSPAN3-202ENST00000346495 C1orf195Q5TG92 126 aa12.29□□□□□ -0.44
TSPAN3-202ENST00000346495 SERP2Q8N6R1 65 aa12.29□□□□□ -0.44
TSPAN3-202ENST00000346495 EPPK1P58107 5090 aaKnown RBP12.29□□□□□ -0.44
TSPAN3-202ENST00000346495 WFDC13Q8IUB5 93 aa12.26□□□□□ -0.45
TSPAN3-202ENST00000346495 TRAV7A0A075B6U4 112 aa12.26□□□□□ -0.45
TSPAN3-202ENST00000346495 IGHV6-1A0A0B4J1U7 121 aa12.26□□□□□ -0.45
TSPAN3-202ENST00000346495 CASC2Q6XLA1 102 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms