RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
HMGN3-202ENST00000344726 COX8AP10176 69 aa7.98□□□□□ -1.13
HMGN3-202ENST00000344726 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
HMGN3-202ENST00000344726 C12orf57Q99622 126 aa7.97□□□□□ -1.13
HMGN3-202ENST00000344726 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
HMGN3-202ENST00000344726 CD164Q04900 197 aa7.96□□□□□ -1.14
HMGN3-202ENST00000344726 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
HMGN3-202ENST00000344726 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
HMGN3-202ENST00000344726 HIST1H4GQ99525 98 aa7.95□□□□□ -1.14
HMGN3-202ENST00000344726 H7C2G1 150 aa7.94□□□□□ -1.14
HMGN3-202ENST00000344726 DLEU1O43261 78 aa7.94□□□□□ -1.14
HMGN3-202ENST00000344726 C14orf144Q96I85 54 aa7.94□□□□□ -1.14
HMGN3-202ENST00000344726 VAMP3Q15836 100 aa7.93□□□□□ -1.14
HMGN3-202ENST00000344726 KRTAP9-9Q9BYP9 154 aa7.93□□□□□ -1.14
HMGN3-202ENST00000344726 KRTAP9-4Q9BYQ2 154 aa7.93□□□□□ -1.14
HMGN3-202ENST00000344726 PAM16Q9Y3D7 125 aa7.92□□□□□ -1.14
HMGN3-202ENST00000344726 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
HMGN3-202ENST00000344726 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
HMGN3-202ENST00000344726 SPATA45Q537H7 98 aa7.91□□□□□ -1.14
HMGN3-202ENST00000344726 Q6ZQY7 126 aa7.91□□□□□ -1.14
HMGN3-202ENST00000344726 Q5XG85 94 aa7.9□□□□□ -1.14
HMGN3-202ENST00000344726 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
HMGN3-202ENST00000344726 CFC1P0CG37 223 aa7.89□□□□□ -1.15
HMGN3-202ENST00000344726 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
HMGN3-202ENST00000344726 HIGD1BQ9P298 99 aa7.89□□□□□ -1.15
HMGN3-202ENST00000344726 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
HMGN3-202ENST00000344726 C1orf195Q5TG92 126 aa7.88□□□□□ -1.15
HMGN3-202ENST00000344726 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
HMGN3-202ENST00000344726 BVES-AS1Q5T3Y7 98 aa7.86□□□□□ -1.15
HMGN3-202ENST00000344726 F8WEM9 126 aa7.85□□□□□ -1.15
HMGN3-202ENST00000344726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.85□□□□□ -1.15
HMGN3-202ENST00000344726 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
HMGN3-202ENST00000344726 A0A0B4J2C4 111 aa7.83□□□□□ -1.16
HMGN3-202ENST00000344726 IGFL1Q6UW32 110 aa7.83□□□□□ -1.16
HMGN3-202ENST00000344726 RAB37Q96AX2 223 aa7.83□□□□□ -1.16
HMGN3-202ENST00000344726 OCIAD2Q56VL3 154 aa7.82□□□□□ -1.16
HMGN3-202ENST00000344726 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
HMGN3-202ENST00000344726 Q6JHZ5 121 aa7.81□□□□□ -1.16
HMGN3-202ENST00000344726 CEND1Q8N111 149 aa7.81□□□□□ -1.16
HMGN3-202ENST00000344726 CLEC2BQ92478 149 aa7.81□□□□□ -1.16
HMGN3-202ENST00000344726 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
HMGN3-202ENST00000344726 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
HMGN3-202ENST00000344726 PYY3Q5JQD4 70 aa7.8□□□□□ -1.16
HMGN3-202ENST00000344726 TCL1BO95988 128 aa7.79□□□□□ -1.16
HMGN3-202ENST00000344726 FXYD2P54710 66 aa7.79□□□□□ -1.16
HMGN3-202ENST00000344726 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
HMGN3-202ENST00000344726 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
HMGN3-202ENST00000344726 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
HMGN3-202ENST00000344726 H3BUT2 72 aa7.78□□□□□ -1.16
HMGN3-202ENST00000344726 H0YGX0 51 aa7.77□□□□□ -1.17
HMGN3-202ENST00000344726 SNHG12Q9BXW3 62 aa7.77□□□□□ -1.17
HMGN3-202ENST00000344726 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
HMGN3-202ENST00000344726 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
HMGN3-202ENST00000344726 TRIAP1O43715 76 aa7.72□□□□□ -1.17
HMGN3-202ENST00000344726 NDUFV3P56181 108 aaKnown RBP7.71□□□□□ -1.18
HMGN3-202ENST00000344726 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
HMGN3-202ENST00000344726 K7ERJ3 54 aa7.7□□□□□ -1.18
HMGN3-202ENST00000344726 SNCGO76070 127 aa7.7□□□□□ -1.18
HMGN3-202ENST00000344726 HSD52Q0P140 79 aa7.7□□□□□ -1.18
HMGN3-202ENST00000344726 A0A1B0GX51 115 aa7.69□□□□□ -1.18
HMGN3-202ENST00000344726 Q6Q795 121 aa7.69□□□□□ -1.18
HMGN3-202ENST00000344726 MT1HP80294 61 aa7.68□□□□□ -1.18
HMGN3-202ENST00000344726 LCE1DQ5T752 114 aa7.68□□□□□ -1.18
HMGN3-202ENST00000344726 H3BMG7 143 aa7.66□□□□□ -1.18
HMGN3-202ENST00000344726 LST1O00453 97 aa7.66□□□□□ -1.18
HMGN3-202ENST00000344726 FABP2P12104 132 aa7.66□□□□□ -1.18
HMGN3-202ENST00000344726 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
HMGN3-202ENST00000344726 TEN1Q86WV5 123 aa7.66□□□□□ -1.18
HMGN3-202ENST00000344726 UQCR10Q9UDW1 63 aa7.65□□□□□ -1.18
HMGN3-202ENST00000344726 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
HMGN3-202ENST00000344726 A0A087WSZ3 146 aa7.63□□□□□ -1.19
HMGN3-202ENST00000344726 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
HMGN3-202ENST00000344726 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 C9orf118A6NHY6 69 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 PSMB2P49721 201 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 Q96NJ1 140 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 SS18L2Q9UHA2 77 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
HMGN3-202ENST00000344726 ORMDL1Q9P0S3 153 aa7.6□□□□□ -1.19
HMGN3-202ENST00000344726 A0A1B0GV72 72 aa7.59□□□□□ -1.19
HMGN3-202ENST00000344726 DNAL4O96015 105 aa7.59□□□□□ -1.19
HMGN3-202ENST00000344726 Q75L30 129 aa7.58□□□□□ -1.2
HMGN3-202ENST00000344726 COX6CP09669 75 aa7.57□□□□□ -1.2
HMGN3-202ENST00000344726 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
HMGN3-202ENST00000344726 TMEM256-PLSCR3K7ERE1 68 aa7.55□□□□□ -1.2
HMGN3-202ENST00000344726 ANKRD29Q8N6D5 301 aa7.55□□□□□ -1.2
HMGN3-202ENST00000344726 H3BQ85 93 aa7.54□□□□□ -1.2
HMGN3-202ENST00000344726 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
HMGN3-202ENST00000344726 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
HMGN3-202ENST00000344726 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
HMGN3-202ENST00000344726 TRACP01848 142 aa7.52□□□□□ -1.21
HMGN3-202ENST00000344726 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.21
HMGN3-202ENST00000344726 A8MUU9 505 aa7.51□□□□□ -1.21
HMGN3-202ENST00000344726 DSCR10P59022 87 aa7.51□□□□□ -1.21
HMGN3-202ENST00000344726 UBE2V1Q13404 147 aa7.51□□□□□ -1.21
HMGN3-202ENST00000344726 SCGB1C2P0DMR2 95 aa7.5□□□□□ -1.21
HMGN3-202ENST00000344726 SIGMAR1Q99720 223 aa7.5□□□□□ -1.21
HMGN3-202ENST00000344726 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
HMGN3-202ENST00000344726 CCKP06307 115 aa7.49□□□□□ -1.21
HMGN3-202ENST00000344726 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms