RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
HMGCR-202ENST00000343975 Q6JHZ5 121 aa4.98□□□□□ -1.61
HMGCR-202ENST00000343975 LINC00643Q86TS7 51 aa4.97□□□□□ -1.61
HMGCR-202ENST00000343975 COX7CP15954 63 aa4.97□□□□□ -1.61
HMGCR-202ENST00000343975 ST20-AS1Q8NBB2 130 aa4.97□□□□□ -1.61
HMGCR-202ENST00000343975 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.61
HMGCR-202ENST00000343975 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.61
HMGCR-202ENST00000343975 Q8NBF4 154 aa4.96□□□□□ -1.61
HMGCR-202ENST00000343975 TMEM258P61165 79 aa4.96□□□□□ -1.62
HMGCR-202ENST00000343975 MOBPQ13875 183 aa4.96□□□□□ -1.62
HMGCR-202ENST00000343975 RBM3P98179 157 aaKnown RBP4.96□□□□□ -1.62
HMGCR-202ENST00000343975 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
HMGCR-202ENST00000343975 SSBP3-AS1Q7Z2R9 100 aa4.95□□□□□ -1.62
HMGCR-202ENST00000343975 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
HMGCR-202ENST00000343975 DNAH6Q9C0G6 4158 aa4.95□□□□□ -1.62
HMGCR-202ENST00000343975 RYR2Q92736 4967 aa4.95□□□□□ -1.62
HMGCR-202ENST00000343975 PDE6GP18545 87 aa4.95□□□□□ -1.62
HMGCR-202ENST00000343975 OXTP01178 125 aa4.94□□□□□ -1.62
HMGCR-202ENST00000343975 SPAG11AQ6PDA7 123 aa4.94□□□□□ -1.62
HMGCR-202ENST00000343975 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
HMGCR-202ENST00000343975 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
HMGCR-202ENST00000343975 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
HMGCR-202ENST00000343975 PRR26Q8N8Z3 221 aa4.93□□□□□ -1.62
HMGCR-202ENST00000343975 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 LINC01600Q96MT4 127 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 ANAPC11Q9NYG5 84 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 KMT2AQ03164 3969 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 KMT2CQ8NEZ4 4911 aaKnown RBP4.92□□□□□ -1.62
HMGCR-202ENST00000343975 HRCT1Q6UXD1 115 aa4.92□□□□□ -1.62
HMGCR-202ENST00000343975 IGLV5-48A0A075B6I7 105 aa4.91□□□□□ -1.62
HMGCR-202ENST00000343975 DNAH10Q8IVF4 4471 aa4.91□□□□□ -1.62
HMGCR-202ENST00000343975 Q8N377 158 aa4.91□□□□□ -1.62
HMGCR-202ENST00000343975 SPRR1BP22528 89 aa4.9□□□□□ -1.62
HMGCR-202ENST00000343975 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.63
HMGCR-202ENST00000343975 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
HMGCR-202ENST00000343975 CCKP06307 115 aa4.89□□□□□ -1.63
HMGCR-202ENST00000343975 SERP2Q8N6R1 65 aa4.89□□□□□ -1.63
HMGCR-202ENST00000343975 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
HMGCR-202ENST00000343975 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
HMGCR-202ENST00000343975 C4orf26Q17RF5 130 aa4.87□□□□□ -1.63
HMGCR-202ENST00000343975 SPINK1P00995 79 aa4.87□□□□□ -1.63
HMGCR-202ENST00000343975 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
HMGCR-202ENST00000343975 C14orf132Q9NPU4 83 aa4.86□□□□□ -1.63
HMGCR-202ENST00000343975 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
HMGCR-202ENST00000343975 V9GYY9 64 aa4.86□□□□□ -1.63
HMGCR-202ENST00000343975 LYSTQ99698 3801 aa4.85□□□□□ -1.63
HMGCR-202ENST00000343975 UBL5Q9BZL1 73 aa4.85□□□□□ -1.63
HMGCR-202ENST00000343975 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
HMGCR-202ENST00000343975 CD164Q04900 197 aa4.84□□□□□ -1.63
HMGCR-202ENST00000343975 A0A087X002 238 aa4.84□□□□□ -1.63
HMGCR-202ENST00000343975 NREPQ16612 68 aa4.84□□□□□ -1.63
HMGCR-202ENST00000343975 A0A087WSZ3 146 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 NDUFB1O75438 58 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 SEC61GP60059 68 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 FAM236DA0A1B0GTK5 79 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 FAM236CP0DP71 79 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
HMGCR-202ENST00000343975 PRR4Q16378 134 aa4.83□□□□□ -1.64
HMGCR-202ENST00000343975 A0A1B0GW54 56 aa4.82□□□□□ -1.64
HMGCR-202ENST00000343975 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
HMGCR-202ENST00000343975 KRTAP1-4P0C5Y4 121 aa4.82□□□□□ -1.64
HMGCR-202ENST00000343975 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
HMGCR-202ENST00000343975 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
HMGCR-202ENST00000343975 IGKV3D-7A0A0C4DH55 119 aa4.82□□□□□ -1.64
HMGCR-202ENST00000343975 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
HMGCR-202ENST00000343975 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
HMGCR-202ENST00000343975 SERP1Q9Y6X1 66 aa4.81□□□□□ -1.64
HMGCR-202ENST00000343975 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
HMGCR-202ENST00000343975 C1orf195Q5TG92 126 aa4.81□□□□□ -1.64
HMGCR-202ENST00000343975 IGLV8-61A0A075B6I0 122 aa4.8□□□□□ -1.64
HMGCR-202ENST00000343975 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
HMGCR-202ENST00000343975 Q5XG85 94 aa4.8□□□□□ -1.64
HMGCR-202ENST00000343975 RYR3Q15413 4870 aa4.8□□□□□ -1.64
HMGCR-202ENST00000343975 LOC110117498A0A087WWA1 95 aa4.79□□□□□ -1.64
HMGCR-202ENST00000343975 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
HMGCR-202ENST00000343975 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
HMGCR-202ENST00000343975 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
HMGCR-202ENST00000343975 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
HMGCR-202ENST00000343975 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
HMGCR-202ENST00000343975 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
HMGCR-202ENST00000343975 BPY2O14599 106 aa4.77□□□□□ -1.65
HMGCR-202ENST00000343975 Q6ZQT0 140 aa4.77□□□□□ -1.65
HMGCR-202ENST00000343975 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
HMGCR-202ENST00000343975 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
HMGCR-202ENST00000343975 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
HMGCR-202ENST00000343975 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
HMGCR-202ENST00000343975 A0A087WVE0 104 aa4.76□□□□□ -1.65
HMGCR-202ENST00000343975 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
HMGCR-202ENST00000343975 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
HMGCR-202ENST00000343975 A0A0U1RQV1 116 aa4.75□□□□□ -1.65
HMGCR-202ENST00000343975 FAT2Q9NYQ8 4349 aa4.75□□□□□ -1.65
HMGCR-202ENST00000343975 IGLV7-46A0A075B6I9 117 aa4.74□□□□□ -1.65
HMGCR-202ENST00000343975 A0A1W2PNM2 257 aa4.74□□□□□ -1.65
HMGCR-202ENST00000343975 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
HMGCR-202ENST00000343975 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
HMGCR-202ENST00000343975 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
HMGCR-202ENST00000343975 FP248Q71RG6 208 aaPredicted RBP4.74□□□□□ -1.65
HMGCR-202ENST00000343975 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms