RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
TPM3-208ENST00000341485 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
TPM3-208ENST00000341485 RTL8CO15255 209 aa9.36□□□□□ -0.91
TPM3-208ENST00000341485 KMT2AQ03164 3969 aa9.36□□□□□ -0.91
TPM3-208ENST00000341485 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
TPM3-208ENST00000341485 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 F8WEM9 126 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 J3KT08 172 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
TPM3-208ENST00000341485 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
TPM3-208ENST00000341485 KLKP1Q107X0 134 aa9.33□□□□□ -0.92
TPM3-208ENST00000341485 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
TPM3-208ENST00000341485 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
TPM3-208ENST00000341485 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
TPM3-208ENST00000341485 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
TPM3-208ENST00000341485 IGLV8-61A0A075B6I0 122 aa9.32□□□□□ -0.92
TPM3-208ENST00000341485 H7BZZ5 65 aa9.32□□□□□ -0.92
TPM3-208ENST00000341485 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
TPM3-208ENST00000341485 PANO1I0J062 215 aa9.3□□□□□ -0.92
TPM3-208ENST00000341485 DSCR10P59022 87 aa9.3□□□□□ -0.92
TPM3-208ENST00000341485 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
TPM3-208ENST00000341485 H0Y9J4 135 aa9.29□□□□□ -0.92
TPM3-208ENST00000341485 UBE2AP49459 152 aa9.28□□□□□ -0.92
TPM3-208ENST00000341485 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
TPM3-208ENST00000341485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.28□□□□□ -0.92
TPM3-208ENST00000341485 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
TPM3-208ENST00000341485 OXTP01178 125 aa9.27□□□□□ -0.93
TPM3-208ENST00000341485 SPRR1BP22528 89 aa9.27□□□□□ -0.93
TPM3-208ENST00000341485 LCE6AA0A183 80 aa9.26□□□□□ -0.93
TPM3-208ENST00000341485 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
TPM3-208ENST00000341485 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
TPM3-208ENST00000341485 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
TPM3-208ENST00000341485 K7EQZ3 153 aa9.25□□□□□ -0.93
TPM3-208ENST00000341485 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
TPM3-208ENST00000341485 A0A087WSZ3 146 aa9.23□□□□□ -0.93
TPM3-208ENST00000341485 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
TPM3-208ENST00000341485 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
TPM3-208ENST00000341485 FAM30AQ9NZY2 134 aa9.21□□□□□ -0.93
TPM3-208ENST00000341485 NDUFC1O43677 76 aa9.2□□□□□ -0.94
TPM3-208ENST00000341485 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
TPM3-208ENST00000341485 A0A0U1RQV1 116 aa9.2□□□□□ -0.94
TPM3-208ENST00000341485 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
TPM3-208ENST00000341485 FRAS1Q86XX4 4008 aa9.17□□□□□ -0.94
TPM3-208ENST00000341485 SACSQ9NZJ4 4579 aa9.16□□□□□ -0.94
TPM3-208ENST00000341485 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
TPM3-208ENST00000341485 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
TPM3-208ENST00000341485 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
TPM3-208ENST00000341485 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
TPM3-208ENST00000341485 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
TPM3-208ENST00000341485 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
TPM3-208ENST00000341485 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
TPM3-208ENST00000341485 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
TPM3-208ENST00000341485 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
TPM3-208ENST00000341485 ATP5EP56381 51 aaPredicted RBP9.1□□□□□ -0.95
TPM3-208ENST00000341485 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
TPM3-208ENST00000341485 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
TPM3-208ENST00000341485 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
TPM3-208ENST00000341485 DNAH5Q8TE73 4624 aa9.08□□□□□ -0.96
TPM3-208ENST00000341485 Q5XG85 94 aa9.08□□□□□ -0.96
TPM3-208ENST00000341485 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
TPM3-208ENST00000341485 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
TPM3-208ENST00000341485 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
TPM3-208ENST00000341485 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
TPM3-208ENST00000341485 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
TPM3-208ENST00000341485 Q6ZSA8 131 aa9.06□□□□□ -0.96
TPM3-208ENST00000341485 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
TPM3-208ENST00000341485 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
TPM3-208ENST00000341485 A8MWP4 228 aa9.05□□□□□ -0.96
TPM3-208ENST00000341485 C5orf47Q569G3 176 aa9.04□□□□□ -0.96
TPM3-208ENST00000341485 DNAH8Q96JB1 4490 aa9.03□□□□□ -0.96
TPM3-208ENST00000341485 PKD1P98161 4303 aa9.03□□□□□ -0.96
TPM3-208ENST00000341485 C4orf26Q17RF5 130 aa9.02□□□□□ -0.97
TPM3-208ENST00000341485 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
TPM3-208ENST00000341485 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
TPM3-208ENST00000341485 RYR2Q92736 4967 aa9.01□□□□□ -0.97
TPM3-208ENST00000341485 A0A1B0GVY2 172 aa9□□□□□ -0.97
TPM3-208ENST00000341485 ZNF861PO60384 105 aa9□□□□□ -0.97
TPM3-208ENST00000341485 Q96NJ1 140 aa9□□□□□ -0.97
TPM3-208ENST00000341485 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
TPM3-208ENST00000341485 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
TPM3-208ENST00000341485 SMIM26A0A096LP01 95 aa8.97□□□□□ -0.97
TPM3-208ENST00000341485 MOBPQ13875 183 aa8.97□□□□□ -0.97
TPM3-208ENST00000341485 IGLV7-43P04211 117 aa8.96□□□□□ -0.97
TPM3-208ENST00000341485 MMP24-AS1A0A0U1RRL7 71 aa8.96□□□□□ -0.98
TPM3-208ENST00000341485 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
TPM3-208ENST00000341485 MP68P56378 58 aa8.93□□□□□ -0.98
TPM3-208ENST00000341485 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
TPM3-208ENST00000341485 NDUFB1O75438 58 aa8.93□□□□□ -0.98
TPM3-208ENST00000341485 KMT2CQ8NEZ4 4911 aaKnown RBP8.92□□□□□ -0.98
TPM3-208ENST00000341485 H0Y9P7 68 aa8.91□□□□□ -0.98
TPM3-208ENST00000341485 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
TPM3-208ENST00000341485 TRAV22A0A0B4J277 110 aa8.9□□□□□ -0.98
TPM3-208ENST00000341485 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
TPM3-208ENST00000341485 hDV103S1A0JD37 113 aa8.9□□□□□ -0.99
TPM3-208ENST00000341485 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
TPM3-208ENST00000341485 H3BPC8 53 aa8.87□□□□□ -0.99
TPM3-208ENST00000341485 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
TPM3-208ENST00000341485 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms