RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SPINK1P00995 79 aa6.87□□□□□ -1.31
CAPRIN1-201ENST00000341394 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
CAPRIN1-201ENST00000341394 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
CAPRIN1-201ENST00000341394 SPAG11AQ6PDA7 123 aa6.87□□□□□ -1.31
CAPRIN1-201ENST00000341394 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
CAPRIN1-201ENST00000341394 CIRBP-AS1Q8TBR5 109 aa6.86□□□□□ -1.31
CAPRIN1-201ENST00000341394 OXTP01178 125 aa6.86□□□□□ -1.31
CAPRIN1-201ENST00000341394 VPREB1P12018 145 aa6.86□□□□□ -1.31
CAPRIN1-201ENST00000341394 LY6G6CO95867 125 aa6.85□□□□□ -1.31
CAPRIN1-201ENST00000341394 TRBV7-4A0A0J9YYF1 115 aa6.85□□□□□ -1.31
CAPRIN1-201ENST00000341394 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
CAPRIN1-201ENST00000341394 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
CAPRIN1-201ENST00000341394 FBN3Q75N90 2809 aa6.84□□□□□ -1.31
CAPRIN1-201ENST00000341394 IGLV6-57P01721 117 aa6.84□□□□□ -1.31
CAPRIN1-201ENST00000341394 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.31
CAPRIN1-201ENST00000341394 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
CAPRIN1-201ENST00000341394 ERC2-IT1O76042 136 aa6.83□□□□□ -1.32
CAPRIN1-201ENST00000341394 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
CAPRIN1-201ENST00000341394 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
CAPRIN1-201ENST00000341394 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
CAPRIN1-201ENST00000341394 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
CAPRIN1-201ENST00000341394 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
CAPRIN1-201ENST00000341394 DYNC2H1Q8NCM8 4307 aaKnown RBP6.81□□□□□ -1.32
CAPRIN1-201ENST00000341394 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
CAPRIN1-201ENST00000341394 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
CAPRIN1-201ENST00000341394 Q8N377 158 aa6.81□□□□□ -1.32
CAPRIN1-201ENST00000341394 KMT2AQ03164 3969 aa6.81□□□□□ -1.32
CAPRIN1-201ENST00000341394 SEC61GP60059 68 aa6.8□□□□□ -1.32
CAPRIN1-201ENST00000341394 Q5XG85 94 aa6.8□□□□□ -1.32
CAPRIN1-201ENST00000341394 FLG2Q5D862 2391 aaPredicted RBP6.8□□□□□ -1.32
CAPRIN1-201ENST00000341394 FAM229BQ4G0N7 80 aa6.8□□□□□ -1.32
CAPRIN1-201ENST00000341394 Q6ZRX8 168 aa6.79□□□□□ -1.32
CAPRIN1-201ENST00000341394 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
CAPRIN1-201ENST00000341394 Q8NBF4 154 aa6.79□□□□□ -1.32
CAPRIN1-201ENST00000341394 LINC01600Q96MT4 127 aa6.79□□□□□ -1.32
CAPRIN1-201ENST00000341394 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
CAPRIN1-201ENST00000341394 PRR34Q9NV39 138 aa6.78□□□□□ -1.32
CAPRIN1-201ENST00000341394 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
CAPRIN1-201ENST00000341394 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
CAPRIN1-201ENST00000341394 KLKP1Q107X0 134 aa6.76□□□□□ -1.33
CAPRIN1-201ENST00000341394 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
CAPRIN1-201ENST00000341394 APLNQ9ULZ1 77 aa6.75□□□□□ -1.33
CAPRIN1-201ENST00000341394 MOBPQ13875 183 aa6.74□□□□□ -1.33
CAPRIN1-201ENST00000341394 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
CAPRIN1-201ENST00000341394 EPM2AB3EWF7 344 aa6.74□□□□□ -1.33
CAPRIN1-201ENST00000341394 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
CAPRIN1-201ENST00000341394 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
CAPRIN1-201ENST00000341394 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
CAPRIN1-201ENST00000341394 IGFL1Q6UW32 110 aa6.71□□□□□ -1.33
CAPRIN1-201ENST00000341394 TRAV22A0A0B4J277 110 aa6.7□□□□□ -1.34
CAPRIN1-201ENST00000341394 hDV103S1A0JD37 113 aa6.7□□□□□ -1.34
CAPRIN1-201ENST00000341394 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
CAPRIN1-201ENST00000341394 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
CAPRIN1-201ENST00000341394 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
CAPRIN1-201ENST00000341394 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
CAPRIN1-201ENST00000341394 NBDYA0A0U1RRE5 68 aa6.67□□□□□ -1.34
CAPRIN1-201ENST00000341394 HYDINQ4G0P3 5121 aa6.67□□□□□ -1.34
CAPRIN1-201ENST00000341394 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
CAPRIN1-201ENST00000341394 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
CAPRIN1-201ENST00000341394 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
CAPRIN1-201ENST00000341394 F8WDY8 70 aa6.65□□□□□ -1.34
CAPRIN1-201ENST00000341394 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.35
CAPRIN1-201ENST00000341394 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.35
CAPRIN1-201ENST00000341394 GVQW2A0A096LPI5 108 aaPredicted RBP6.64□□□□□ -1.35
CAPRIN1-201ENST00000341394 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
CAPRIN1-201ENST00000341394 OCR1Q9BZK8 76 aa6.64□□□□□ -1.35
CAPRIN1-201ENST00000341394 COA5Q86WW8 74 aa6.63□□□□□ -1.35
CAPRIN1-201ENST00000341394 DSCR10P59022 87 aa6.61□□□□□ -1.35
CAPRIN1-201ENST00000341394 BCE1O60756 84 aa6.61□□□□□ -1.35
CAPRIN1-201ENST00000341394 PRR26Q8N8Z3 221 aa6.61□□□□□ -1.35
CAPRIN1-201ENST00000341394 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
CAPRIN1-201ENST00000341394 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
CAPRIN1-201ENST00000341394 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
CAPRIN1-201ENST00000341394 PRR15Q8IV56 129 aa6.59□□□□□ -1.35
CAPRIN1-201ENST00000341394 C1orf134Q5TEV5 83 aa6.59□□□□□ -1.35
CAPRIN1-201ENST00000341394 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
CAPRIN1-201ENST00000341394 DNAH6Q9C0G6 4158 aa6.57□□□□□ -1.36
CAPRIN1-201ENST00000341394 C16orf90A8MZG2 172 aa6.56□□□□□ -1.36
CAPRIN1-201ENST00000341394 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
CAPRIN1-201ENST00000341394 A0A1B0GU69 56 aa6.55□□□□□ -1.36
CAPRIN1-201ENST00000341394 A8MU10 97 aa6.55□□□□□ -1.36
CAPRIN1-201ENST00000341394 A8MWP4 228 aa6.55□□□□□ -1.36
CAPRIN1-201ENST00000341394 ZNF706Q9Y5V0 76 aaPredicted RBP6.53□□□□□ -1.36
CAPRIN1-201ENST00000341394 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
CAPRIN1-201ENST00000341394 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
CAPRIN1-201ENST00000341394 A0A087WTM6 91 aa6.5□□□□□ -1.37
CAPRIN1-201ENST00000341394 RTL8CO15255 209 aa6.49□□□□□ -1.37
CAPRIN1-201ENST00000341394 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
CAPRIN1-201ENST00000341394 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 DNAH17Q9UFH2 4485 aa6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 CNBPP62633 177 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
CAPRIN1-201ENST00000341394 FAT2Q9NYQ8 4349 aa6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 Q6ZR54 194 aa6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
CAPRIN1-201ENST00000341394 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms